KEGG   Pedobacter cryoconitis: AY601_4235
Entry
AY601_4235        CDS       T04341                                 
Name
(GenBank) Exodeoxyribonuclease III Xth
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
pcm  Pedobacter cryoconitis
Pathway
pcm03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pcm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    AY601_4235
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pcm03400]
    AY601_4235
Enzymes [BR:pcm01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     AY601_4235
DNA repair and recombination proteins [BR:pcm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     AY601_4235
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2
Other DBs
NCBI-ProteinID: AMQ01084
UniProt: A0A127VID6
Position
complement(4951417..4952187)
AA seq 256 aa
MKILSYNVNGIRAASTKNFVGWLQSTDADMICLQEVKALPSQIPEIIGLIENLGYHHYWF
AAEKKGYSGVAIFSKIKPNHVEYGCGEEWIDKEGRILRADFDTFSLMSVYLPSGSSGDER
QVKKYEFMAYFEKYITKLRETYPNLIISGDYNICHTAIDIHNPKSNANSSGFLPQEREWM
GLFLEAGFIDTFRHLNKDPHHYTWWSYRAGSRGKNLGWRIDYHLATQPMLERIKDVKILS
DAIHSDHCPILLELTS
NT seq 771 nt   +upstreamnt  +downstreamnt
atgaagatactttcttacaacgtgaacggaatccgtgctgcctctacaaaaaactttgta
ggctggctgcaatcaacggatgcagatatgatctgtcttcaggaagtgaaagcccttcct
tctcaaattccggagatcattggtttaattgagaaccttggctatcaccattactggttt
gctgcagaaaaaaagggctacagcggagtcgccatattttcaaaaatcaaacctaatcac
gttgaatatggatgtggggaagaatggatagataaagaaggacgcattttaagggccgat
tttgatactttctctttaatgagcgtatatcttccatccggatcatccggagacgagaga
caggttaaaaagtatgaattcatggcctattttgagaagtatatcaccaaactccgcgaa
acttatccaaatctgatcatttcgggtgattataacatctgtcataccgcaattgatatc
cataatcctaaatccaacgcgaattcatccggcttcctgcctcaggaaagagagtggatg
ggtttattcctggaagcaggttttattgatactttcagacacctgaacaaagatcctcat
cattacacatggtggagctacagagcaggttcaagaggtaagaacctgggttggcgtatc
gattatcatttggctacgcaacctatgctagagcggattaaagacgttaaaatcttatct
gatgccatacactctgaccattgtccaatcttattggaacttacgtcataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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