KEGG   Cutibacterium acnes 6609: TIB1ST10_05905
Entry
TIB1ST10_05905    CDS       T02065                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
pcn  Cutibacterium acnes 6609
Pathway
pcn03030  DNA replication
pcn03430  Mismatch repair
pcn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pcn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TIB1ST10_05905 (dnaE)
   03430 Mismatch repair
    TIB1ST10_05905 (dnaE)
   03440 Homologous recombination
    TIB1ST10_05905 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pcn03032]
    TIB1ST10_05905 (dnaE)
   03400 DNA repair and recombination proteins [BR:pcn03400]
    TIB1ST10_05905 (dnaE)
Enzymes [BR:pcn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     TIB1ST10_05905 (dnaE)
DNA replication proteins [BR:pcn03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     TIB1ST10_05905 (dnaE)
DNA repair and recombination proteins [BR:pcn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     TIB1ST10_05905 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon
Other DBs
NCBI-ProteinID: AEH29474
Position
1249515..1253087
AA seq 1190 aa
MARSDFVHLHTHTEYSMLDGAASNEKLFAEVARQGMPAVAMTDHGNMFGAYEFFQISKKY
DGDQNPLVKPIIGIEAYVAPSTRKSRVQEFWGTSRDAGDPDAEGGKDVSGGGRYTHMTMW
AKDSEGLHNLFRLSSLASYEGYYMKPRMDRELMGQYPGGIIASTGCPSGEVQTRLRLGQF
EEACQAASDYRDIFGRENYFCELMDHGVPIEKQVRSDLLKLAKKLDIPLLVTNDSHYVTE
DQADAHDSLLCVGVGRNKDDPNRFRFNGSGYYIKSSEQMRALFPDHPEACDNTLLLTEMI
GSYDEVFKYVDRMPQFDVPEGETQESWLRKKLQEGLDEKFGPNPPKEVLERLETELSVIE
PLGFASYFLVVSDICNAARSMGVPVGPGRGSAAGSLVAYLTGIIAINPLEHGLLFERFLN
PERVNPPDIDLDFDDRQRDKVIDYVTHKYGAEYTSQVNTFGKIKAKAAVKDANRILGYPF
ALGDKITKAMPPDVMGKGVPLDKIFDSSHERYGEGQEFRQLVADNPDVAKVVETAKGLEG
LIRGTGVHACAFILSSTPLLDLVPMHKRDKDGMIIAGFAYPQLEEMGLMKMDFLGLRNLG
IMDHCIKIIKANRGIDVDLKNIALDDKTTYEMLARGDTLGVFQLDGTAMRSLLRLMGPTC
FDDIVAVLALYRPGPMGANAHISYAQRKNNREPIIPIHPELKEDLDEILAPTYHLIVYQE
QIMSIARKLAGYTLGGADLLRRAMGKKKKHILEENFIPFQAGMREHGYSDDAIQTLWDVM
VPFAGYAFNKSHAAGYGLVSYWTAYLKANYPAEYGAALLTSVGDDKDKMAMYLADMRAQH
INVLPPDVNASSLEFTAVGEDIRFGLGAVRNVGANAVAEIIRAREENGPAPDFFTFLDQV
SLTVCNKRLIESLIKAGAFDSMGHSRRGLMAVYGQAVDAVIDIKRNQANGQDDLFGMGDD
SQPTQMGVERVVPDDDWDRSTKLAFEREMLGLYVSDHPLRGLEAALEAESDISVAELVNP
EGHHEGRYTVVGMVTQIVRRTTKNGDIWASVTLEDLDASITIACFPKVYQRVEPLLAVDS
ILKVRGFVRERDETVEMSANDIWLLDLTDASKAPMTIDMRRGRCTRGTLEELRGVLRNHP
GSSEVRLRLIDGKVTTTFRLADELKVTQGQPLMADLKALLGPSCVPRRQQ
NT seq 3573 nt   +upstreamnt  +downstreamnt
gtggcccgttccgacttcgtccacctccacacccacaccgaatactcgatgctggacggc
gctgccagcaacgagaaacttttcgccgaggtggcacgtcaagggatgcctgcggtcgcg
atgaccgaccacggaaatatgttcggtgcctacgagttcttccagatttccaagaagtac
gacggggaccagaatcctctcgttaagccgatcattggtatcgaggcgtacgtcgctccg
agtacccgcaagtcacgagtacaggaattctgggggacctcgcgtgatgcaggagatccg
gatgccgagggcggcaaagacgtctctggcggcggtcggtacacccatatgacgatgtgg
gcgaaggattccgaaggcctgcacaaccttttccgactctcgtccttggcgtcctatgag
ggctactacatgaaaccgcgtatggaccgcgagctcatgggccagtaccccggtggcatc
atcgcctcaaccggctgcccatcgggtgaggtgcagacccggctgcgcctcggccagttt
gaggaagcttgccaagctgcatccgattatcgggacatctttggccgtgaaaactatttt
tgtgagttgatggaccacggcgtcccaatcgaaaagcaggtgaggtccgacctgctgaag
ctggccaaaaaactagacattccgttgctggtcaccaacgactcccactacgtcactgag
gatcaggccgacgcccacgactctttgctgtgtgtcggtgtgggccgaaacaaagatgat
ccgaaccggttccggttcaacggttccggctactacatcaaatcctcggagcagatgcgg
gcgctgttccccgaccatccggaggcctgtgacaacaccttgctgctgaccgagatgatt
ggttcctatgacgaggtgttcaagtacgtcgaccggatgccgcagttcgatgttcctgag
ggggagactcaggagtcctggctgcgtaagaaactccaggaaggacttgacgagaaattc
ggtccgaacccacccaaagaggtcctagagcgtctcgagactgagctgtcggtcatcgaa
ccgctgggattcgcctcgtacttcctcgttgtctccgatatttgcaacgcggcacgttcg
atgggggtaccggtagggcccggacgtggttcggcggctggttccctggttgcctacctg
accggcattatcgcgatcaacccgctggaacacggtctactgttcgagaggttcctcaac
ccggagcgcgtcaatccgcccgatatcgaccttgacttcgacgatcgtcagcgtgacaag
gtcattgattacgtcacgcacaagtacggggccgagtacaccagccaggtcaacaccttc
ggcaagattaaggcgaaggccgctgtgaaagacgctaaccgtattctcggctatcccttc
gccctcggcgacaagatcaccaaggcaatgcccccggacgtgatgggcaagggcgttcca
ctggacaagatcttcgactcctcccacgagaggtatggcgaaggccaggagttccgtcag
ctggtggcagataaccctgacgtagccaaggttgtcgagactgccaaaggcctcgagggg
ctgattcgaggcaccggcgtgcatgcctgcgcgttcatcctgtcgagtaccccgctgctt
gacctcgtgccgatgcacaagcgcgataaggacggcatgatcattgccggcttcgcgtac
ccccagctcgaggagatggggctcatgaagatggatttcctgggcctgcgcaacctcggc
atcatggatcattgtatcaagatcatcaaggccaaccgggggattgatgtcgatctcaaa
aacatcgcccttgatgacaagacaacctacgagatgctggcgcgcggcgacaccctaggc
gtcttccagcttgatggcacggccatgaggtcgttgctgcggctcatgggtccgacatgc
ttcgacgacattgttgccgtgctagccctgtatcgcccgggccctatgggcgctaatgcg
catatctcttatgctcagcgtaagaacaaccgggaaccgatcattccgatccatcccgaa
ctcaaggaggacctcgacgagatccttgctcccacgtaccacctcattgtgtaccaggag
cagatcatgtcgatcgcccgaaaacttgccgggtataccctgggtggcgccgacctgttg
cgccgagcgatgggtaagaaaaagaagcacatcctggaggaaaacttcatccccttccag
gcgggtatgcgtgaacacggttactccgacgatgccatccagactttgtgggacgtcatg
gtccccttcgctggatacgcctttaacaaatcccacgctgctggctatggacttgtctcg
tactggacggcttacctcaaggccaactacccggctgaatacggcgctgctctgctgacg
agcgtcggtgacgataaagacaagatggcaatgtacctagctgacatgcgcgcccagcac
atcaacgtccttcctcccgacgtcaacgcatcctcccttgagttcaccgctgtcggtgag
gacattcggttcggcctgggggccgtccgaaatgtcggggccaatgcggtagctgagatt
attcgcgcccgggaggagaacggtccagcccccgacttcttcaccttcctcgatcaggtt
agcttgacagtatgcaataagagactcatcgagtccctcattaaggctggcgctttcgac
tctatgggtcactctcgacgtgggcttatggctgtctacgggcaggccgtcgacgccgtc
atcgacatcaagcgcaaccaagccaacggtcaagacgatctattcggcatgggggatgat
tcccagcccactcagatgggggtcgagagggtcgttcccgacgacgattgggatcgcagt
accaaactcgccttcgagcgcgagatgctcggtctctatgtgtcggaccacccgctgcgt
gggctcgaggctgctctggaggccgaatcagatatttcggtggcggaactcgttaatcct
gagggccatcacgagggccggtataccgtggtcggcatggtcacccagatcgtgcggcgt
acgactaagaacggtgacatttgggcctcagtaaccctggaggaccttgatgcgtccatc
accatcgcctgtttcccaaaggtttatcagcgagtggaacccttgctagcggtggacagc
atcctgaaggtacgcggcttcgtccgggaacgtgacgagacggttgaaatgtcggccaac
gacatctggttgcttgatctcactgacgctagcaaggcaccaatgacgatcgatatgcgt
cgcggacgctgcacccgtggcacgcttgaagagttgcgcggggtgctgcgcaaccatccg
ggtagttccgaggtgaggttgcggctcattgacggcaaagtgacaacaacattccggctt
gccgacgaacttaaagtcacccaaggtcagccgctcatggcggacctcaaggctttgctt
ggcccgtcgtgcgtcccaaggaggcagcagtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

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