KEGG   Cutibacterium acnes 6609: TIB1ST10_09625
Entry
TIB1ST10_09625    CDS       T02065                                 
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
pcn  Cutibacterium acnes 6609
Pathway
pcn03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pcn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    TIB1ST10_09625 (rpoB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pcn03021]
    TIB1ST10_09625 (rpoB)
   03400 DNA repair and recombination proteins [BR:pcn03400]
    TIB1ST10_09625 (rpoB)
Enzymes [BR:pcn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     TIB1ST10_09625 (rpoB)
Transcription machinery [BR:pcn03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     TIB1ST10_09625 (rpoB)
DNA repair and recombination proteins [BR:pcn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      TIB1ST10_09625 (rpoB)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_45 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_1
Other DBs
NCBI-ProteinID: AEH30197
Position
complement(2045202..2048681)
AA seq 1159 aa
MAATRTASKNTSAISPQSGRISFAKIHEPLEVPNLLDLQVESFNWLVGNEIWQSRVDAAL
AEGRTDINTKSGLEEIFEEISPIEDYSQTMSLSFRDHRFEDPKHSVDECKDRDTTYAAPL
FVTAEFMNNETEEIKSQTVFIGDFPLMTSKGTFIINGTERVVVSQLVRSPGVYFEKTADK
TSDKDIFTCKVIPSRGAWLEFEIDKRDTVGVRLDRKRKQNVTVFLKALGWTADRILEEFG
THESIRQTLEKDHGVETQDQALLDIYKKLRPGEPPSRDAAQQLLENYYFNPKRYDLAKVG
RYKINKKLGLSLPFDQQVLTVDDIVAAIHFVCALHEGTAILPREGQDDIVVEPDDIDHFG
NRRLRTVGELIQNQLRTGLSRMERVVRDRMTTQDIEAITPQTLINIRPVTAAIKEFFGTS
QLSQFMDQNNPLAEMTHKRRLSALGPGGLSRDRAGMEVRDVHPSHYGRMCPIETPEGPNI
GLIGSLASFARVNAFGFIETPYRKVVDGHVTDEVVYLTADEEDRHVIAQANAKLDDDGHF
ANDRVLVRQRHGEADEVPSSEVDYMDVSPRQMVSVASALIPFLEHDDASRALMGANMQRQ
AVPLVRTEAPFVGTGMEYRCAVDVGDVTLAEKAGSVLSVSADLIDIACDDGTYQTYKLEK
FRRSNAGTCINQRPLVKVGQRVEVGTPLADGPSTDNGELALGRNMLAAFMPWQGLNYEDA
IILSQRIVSDDVLTSIHIEEHEVDARDTKLGAEEITRDIPNVSEDMLANLDENGIVRIGA
EVGTGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGEEGTVIGVRIFD
TENGDELAPGVNQMVRVYVAQKRKISIGDKLAGRHGNKGVISKILPVEDMPFLPDGTPVD
IILNPLGVPSRMNVGQVLEMHLGWIAHSGWDITQAEGDWAERLREVGLIDIPEESRLATP
VFDGATEQEITGLLQYGHPTRDGEMLVDTDGKATLFDGRTGEPFPSKVGVGYMYMLKLHH
LVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWAMEAYGAAWALQELLTIKSDD
VPGRVKVYEAIVKGENIPEPGIPESFKVLVKEMKSLCLNVEVLNSEGQEIDLRGSEEDTR
SGLGIDIGRRPGADNAMAD
NT seq 3480 nt   +upstreamnt  +downstreamnt
ttggccgccacgcgtaccgcgtcgaagaacaccagcgccatttcgccccagtcgggacga
atttcattcgccaagattcacgagccgttggaagttcccaaccttctcgatcttcaggtc
gagtcgtttaactggctcgttggcaacgagatatggcagtcccgtgtggacgccgccctt
gcagaggggcgtaccgacattaataccaagtccgggctcgaggagattttcgaggagatc
tctccgatcgaggactactcccagacgatgtccctgtctttccgggatcaccgtttcgaa
gatcctaagcacagcgttgacgagtgcaaggaccgcgacaccacctacgcagccccactg
ttcgtgactgcggagttcatgaacaatgagaccgaggagattaagtctcagacggtcttt
attggtgactttccgctcatgacctccaaaggcaccttcattatcaacggcactgagcgt
gtcgtggtgtcccagttggtgcgttcccccggtgtctactttgaaaagactgccgacaag
acctccgacaaggacatctttacctgtaaggtgatcccgtcgcgtggcgcctggctcgag
ttcgagatcgacaagcgtgacaccgtcggcgtccgtctggaccgtaagcgcaagcagaac
gtgaccgtcttccttaaggccctcggttggactgccgaccggatcctcgaggagttcggc
actcatgagtcgatccgtcagacccttgagaaggaccatggcgtcgagactcaggatcaa
gctctccttgacatctacaagaagctgcgtcctggcgagccgccgtcccgtgacgccgcg
cagcagctgctcgagaattactacttcaacccgaagcgctacgacctggccaaggttggt
cggtacaagatcaacaagaagctcggtctgtccctgcccttcgatcagcaggttctgacg
gtcgacgacatcgtcgctgctatccacttcgtgtgcgccctgcacgagggcaccgcgatt
ctgccgcgggagggacaggacgacatcgtcgttgagcccgacgacattgaccatttcggt
aaccgtcgtttgcgtaccgtcggcgagctgatccagaaccagttgcgtaccggtctgagc
cgtatggagcgcgtcgtgcgtgaccgcatgactacgcaggacattgaggccatcaccccg
cagactttgattaacatccgcccagtgacggcggcgatcaaggagttcttcggaacctcc
cagctgtcgcagttcatggatcagaacaacccgctggccgagatgacccacaagcgtcgc
ctgtcggccttgggccccggcggtttgtctcgtgaccgtgccggcatggaggtccgtgac
gttcacccgtcgcactacggtcgtatgtgcccgattgagacccctgagggtccgaacatt
ggtctgattggttcgctggcttccttcgctcgcgtcaatgcttttgggttcatcgagacc
ccataccgcaaggtcgttgacgggcatgttaccgatgaggtcgtctacctgaccgctgac
gaagaggatcgtcacgtcattgcccaggccaacgcgaagcttgatgacgatggccatttc
gccaacgatcgtgtgctggtgcgccagcgccacggtgaggccgacgaggttcccagctcc
gaggtcgactacatggatgtgtccccgcgccagatggtgtcggtggcgtctgctctcatc
ccattcctcgagcacgacgatgcttcccgagccctcatgggcgcgaatatgcagcgtcag
gctgtgccgctggtgcgcactgaggctccattcgtcggaaccggtatggaataccgttgt
gcggttgacgtcggtgatgtcactcttgctgagaaggccggttcggtgctgtcggtgagc
gctgaccttatcgacatcgcctgcgacgacggcacttaccagacctacaagctggaaaag
ttccgccgctcgaatgccggtacctgcattaatcagcgtccgctggtcaaggtggggcag
cgcgttgaggttggcaccccgctggccgacggcccgtcgaccgacaacggcgagcttgcc
ctcggtcgcaatatgttggccgcattcatgccttggcaaggcctcaactatgaggacgcc
atcattctgtcccagcggatcgtctctgatgacgttctcacctcgatccacatcgaggag
cacgaggtcgacgctcgtgataccaagctgggtgctgaggagattactcgggatattccg
aacgtttccgaggatatgctggccaaccttgacgagaacggcatcgtgcgtatcggtgca
gaggtcggcactggcgacatcctggttggcaaggtcactccgaagggcgagaccgagctg
acccctgaggagcgtctgctgcgcgcgatcttcggtgagaaggcccgcgaggtccgtgat
acttcccttaaggttcctcacggcgaggaaggcactgtcatcggggtgcgcatcttcgac
accgagaacggtgacgagttggcgccgggcgttaaccagatggttcgcgtctacgtcgcc
cagaagcgcaagatctccatcggtgacaagctggccggacgccacggtaacaagggcgtc
atctcgaagattctacctgtcgaggacatgccgttcctgccggacggcacccctgtcgac
atcatcctcaacccgttgggtgtgccctcccgaatgaacgtcgggcaggttcttgagatg
cacctgggctggatcgctcactccggctgggatatcacccaggccgagggtgattgggcc
gagcgtctgcgcgaggttggcctcattgatattcctgaggaatcccgtctggccaccccg
gtattcgacggtgccaccgagcaggagatcaccggtttgctgcagtacggccacccaacc
cgcgatggcgagatgctcgttgacaccgacggtaaggcgaccctcttcgatggccgtacc
ggcgagcccttcccctcgaaggtgggcgtcggctacatgtacatgctgaagctgcaccac
ctggttgacgacaagatccacgcccgttccaccggcccgtactcgatgatcacccagcag
ccgcttggcggtaaggcccagttcggtggtcagcgattcggtgagatggaagtgtgggcc
atggaggcctatggcgccgcttgggctttgcaggagctgctcactatcaagtccgatgac
gttccaggccgtgtcaaggtctatgaggcgatcgtcaagggcgagaacattcctgagccg
ggtatccctgaatccttcaaggtgctcgtcaaggagatgaagtcactctgcctgaatgtg
gaggtgctcaactcggagggccaagagatcgacttgcgcggctctgaggaagacacccgg
tctggtctgggtatcgacattgggcgtcgtcctggtgccgacaacgctatggccgactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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