KEGG   Phanerochaete carnosa: PHACADRAFT_102664
Entry
PHACADRAFT_102664 CDS       T03128                                 
Name
(RefSeq) hypothetical protein
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
pco  Phanerochaete carnosa
Pathway
pco03030  DNA replication
pco03410  Base excision repair
pco03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:pco00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PHACADRAFT_102664
   03410 Base excision repair
    PHACADRAFT_102664
   03450 Non-homologous end-joining
    PHACADRAFT_102664
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pco03032]
    PHACADRAFT_102664
   03400 DNA repair and recombination proteins [BR:pco03400]
    PHACADRAFT_102664
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pco04147]
    PHACADRAFT_102664
DNA replication proteins [BR:pco03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    PHACADRAFT_102664
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     PHACADRAFT_102664
DNA repair and recombination proteins [BR:pco03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     PHACADRAFT_102664
Exosome [BR:pco04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   PHACADRAFT_102664
SSDB
Motif
Pfam: XPG_N XPG_I 5_3_exonuc
Other DBs
NCBI-GeneID: 18907234
NCBI-ProteinID: XP_007399595
JGI: Phaca1_102664
UniProt: K5VKB4
Position
Unknown
AA seq 384 aa
MGIKGLTAIIAEHAPNAIKEHEIKTLFGRKVAIDASMSIYQFLIAVRQKDGELLTNDAGE
TTSHLMGFFYRTIRMVDNGIKPLYVFDGKPPELKSGVLSKRFERREEAKEDEEEAKETGT
TEDVDRFSRRQVKVTREQNEECRRLLTLMGVPWVVAPSEAEAQCAELARGGKVYAAGSED
MDTLTFNSAILLRHLTFSEARKAPISEINLEKVLEGLEMSMSQFIDLCILLGCDYLEPIK
GVGPKSALKLIREYGGLAEVVEHLREKCGGISVPDEWPWEEAKKLFEKPDVTPASEVEIE
WKGPDVEGLVDFLVKEKGFNEDRVRKGAEKLTKGVAAKQQGRLDGFFKAPAKAEKKEKKD
EDKKPAKGKSKGDAKGTKRKVGCL
NT seq 1155 nt   +upstreamnt  +downstreamnt
atgggcatcaaaggcctcaccgccatcatcgcagaacacgcaccgaatgctatcaaagaa
catgagatcaagaccctcttcggccgcaaggtcgccatcgacgcgtccatgtccatatac
cagtttctcatcgctgtcaggcaaaaggacggagagctcctgacgaacgacgcgggtgag
acgaccagtcacctcatgggttttttctaccgcacgatacgaatggtggacaacggaatc
aagccgctgtatgtatttgacggaaaacccccagagctcaagtccggagtcctgtcgaaa
cgtttcgagaggagagaggaagcgaaggaagatgaggaggaagcaaaggagacaggtacg
acggaggacgtggacaggttctcgagacggcaagtcaaagtcacacgagaacagaatgag
gaatgccgaaggctccttacgctgatgggcgtcccatgggtagtggcaccgtcagaagct
gaagcacagtgtgctgagcttgcgcgtggcggcaaggtctatgcagctggctcagaagac
atggatactctcaccttcaactccgctatcctcttacgacatctcaccttctccgaggcg
cgcaaggctcctattagcgaaataaacctcgagaaggtccttgaaggccttgaaatgagc
atgtcacaattcattgacctctgtattctccttggctgcgactacctcgagcccatcaag
ggtgtcgggcccaaatccgcgttgaaactcatccgcgaatacggcgggcttgccgaagtt
gtcgagcacctccgcgagaagtgtggtgggatctcggtgccggacgagtggccctgggag
gaggcaaagaagctattcgagaagccggacgtcacgcccgcgagcgaggtcgagatcgag
tggaaggggcctgacgtcgagggcctcgtcgacttcctcgtgaaggaaaagggcttcaac
gaggaccgtgtgcgcaaaggcgcggagaagctcacgaagggcgtcgcagcgaagcagcag
ggccgcctcgacgggttcttcaaagcaccggcgaaagcagagaagaaagagaagaaggat
gaggacaagaagccggcgaagggcaagagtaagggagacgccaaggggacgaagcgcaag
gtcggttgcctctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (30)   

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