KEGG   Phanerochaete carnosa: PHACADRAFT_144527
Entry
PHACADRAFT_144527 CDS       T03128                                 
Name
(RefSeq) hypothetical protein
  KO
K12604  CCR4-NOT transcription complex subunit 1
Organism
pco  Phanerochaete carnosa
Pathway
pco03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pco00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PHACADRAFT_144527
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pco03019]
    PHACADRAFT_144527
Messenger RNA biogenesis [BR:pco03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     PHACADRAFT_144527
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     PHACADRAFT_144527
SSDB
Motif
Pfam: Not1 CNOT1_CAF1_bind DUF3819 CNOT1_TTP_bind CNOT1_HEAT DUF167
Other DBs
NCBI-GeneID: 18908627
NCBI-ProteinID: XP_007396074
JGI: Phaca1_144527
UniProt: K5UZY2
Position
Unknown
AA seq 2112 aa
MDNPANPNIHTIVKAQIVFLLSTLTEDNFERNQVEIRSLSEQHGLETYLHFIRRLIVHSS
SRISASSSPASLDPSSALTFRLLMEEVQRLARDPFLADRFRDGVDKGEGEAFRNFDLLRF
MDRVGLRPLERLVLASSIAAAPTRRELSGMSVNIIRMEFENAVLSLCQHPSFDQADLSPN
QVAKLMSNLLSEAPTDGPILDATQRQALIMAAQTKYGPEIIMPILQRILPTIHLQQNTTL
VQLMIQLGPEMTCDPDIALAVLARFGMTENSPPQDEQVVEIISQLARLAAEGPISVDVGA
LVHVLARLNQNLNWANAIHAFDRPDRHGVETSTLKLLIAILLSCPLESEHHAVSGFWQIW
NNSLYQLRLLDALLSLPSDTFNFVTLPGRRIVSTDDIPATSPSIKALAANVQVHTWNSLD
LFEVLVGLADSESLEVRNFVREMLDKAVKISAEIVQMGLLQVAGLPWGEIRLEYSQRLLT
MFLAGHPNHQLVFMRIWQIEPKYLLNSLREFYEENPLNITRILDVAQDLKILDHLLDCKP
FAFALDVAALASRREYLNLDKWLADNVTAHGADFLHGVIGFLDSKMESEKSTRVSDPAVE
SRTMPLSPQTITIFLRVLRANSNLMHESDVDYCLEVRNACLQIHPRLMNLMPGTDVEPGF
TVVTYSQEVEAEVDSIYKQMYDEHNTIDEVIALLQRNKNSNNPRDHEIFSCMLHFLFDEY
KFFQSYYPPRELAMTGYLFGSLIQYQLVDYIPLGVAIRYVLDALNCPPETNLFKFGLQAL
VRFESRLPEWQPLCQALLKIPHLLDARPELVNILGRAIAMGGEGQNNTADLRTLPGGTIP
EAPSAFTAVRLDLTDGSPESPAEEVSDKILFIVNNLAPSNFDAKLTEMKEQFQEQHSRWF
ANYLVDQRVSTEPNNHQLYLRFLDALNIKALFNFVLHETFVKSAQLLNSEKTLQVASERT
VLKNVGAWLGSITLARDRPIKHKNLSFKDLLIEGFDNGRLIVAIPFVCKTLEPCARSKVF
GPPNPWLMAVISLLAELYHYAELKLNLKFEIEVLCKSLDIDLEAVQATTILRNRPLSDSG
PQLPEYPSNIDSLPMGGYDPARMQSDGQVIALSGARASDQRALDAHIENILASVLPMVVI
NPALAPLNTNQSFKRAIQVAVERSIREIIMPVVERSVTIAGISTRELVLKDYVTEQSEEK
LRHAGRLMSQKLAGSLAQVTCKEPLRGNLASHLRVVLTEFGFAEIVSEEIITLVVNDNVD
IACQAIEKAAMDRAALEVDEAFASHFEARRRHREQRPGQPFWDPAIPASSQFSAILPDPL
RIRPMGVQPIQAAVYEDFATDGKRRTGVISRPGSTVSYTHNDPLSSIYNPSPAPDAVQGR
TLLSHVDIMDRFTALIKDLESVLPQLPIQSLTALPPNHEIRQLLREILFLAASSADHQRT
PLLMSQKIVQLLYKSSMQLGREIYVALLDKLCHSFEEVAKEAINWLIYAEDERKFNVPAT
VTLLRSGLVNLGQEDQQLAKFLYTEPKPSLLNFAAGLIRECLSSDPPVASQAQFAYTLEI
LTQLAQQGKANDEVLRLLEDLRGVRRPSTTAPDAGIARQPSVKPENDSLREKLFIWFQQW
VHIYQRSPLPEKSFVPFISQLTKQGILKAEDVSSFFFRVCMESSVNSYVKCVNSGEFDFA
FIALDAFSRLIVYMIKYHGDASGVNNEQAKVHYLTKILSIVVLVLANMHEEQGLLFSQKP
FFRFFSSLLNDLHAIESNLSVVYFPLLLAVSDTFSSLQPTFFPGFAFSWTSLISHRLFMP
KLLLSENREGWSTFYRLLLALFKFLTPFLKASDLQPATRDLYRGSLRLLLVLLHDFPEFL
SEYYFTLCDIIPPHCIQLRNVILSAFPPTIILPDPHLRNVKFDSIPEMGPIPPVLSDFSS
VLKAGDLRTYLDQYLLNRGSPSFLPSLKDHLLLSEGSTDRYNLSLMNALVMYIGVSSVAQ
AKARSGSSLFVASDPGVVALQYLATNLDVEGQHHLLSAMVLHLRYPNAHTHWFSSLMLHL
FYELKDDKFREIMTKVLLERFLVHRPHPWGALVTFIELLRNSKYDFWNHDFIRIAPEVTL
LLETVARSIFQS
NT seq 6339 nt   +upstreamnt  +downstreamnt
atggataaccccgctaacccgaacatacataccatcgtcaaagctcaaatcgtcttcctc
ttgtcgaccttaacggaggacaacttcgagcggaaccaagtcgaaatcagatccctctct
gaacaacatggccttgaaacctacctgcacttcatccgacgtctgatcgttcactcttcc
tcccgaatatccgcctcctcttcccccgcgtcgttggacccctcttccgccctcaccttt
cgcctgctaatggaagaagtgcaacgtctggcacgcgacccttttctcgcagaccgcttc
agagatggtgtcgataaaggcgagggggaggcattccgcaacttcgacctgttgcgtttt
atggacagagtgggtttacggccgctcgagcgactcgttctggcatcttccatcgcagcc
gctcctacgcgacgagagttgtccgggatgtcggtcaatatcattcgcatggagttcgag
aacgccgtcctctcgttgtgccagcacccatccttcgaccaagcggacttgtccccaaac
caggtcgcgaagctgatgtccaatctcctcagcgaggctccaaccgacggccccatcctc
gacgcgacccagcgacaagcgctcataatggcggctcagacgaagtatggcccggagatc
atcatgcctatcctgcagcgcatattgcccaccatccatcttcaacagaacacgaccttg
gtgcaactgatgattcagcttggaccggaaatgacctgcgatcctgatatcgcgttagcg
gtgttggctcgctttggaatgactgagaacagtccgccgcaggacgagcaggtggtggaa
attatttctcagttggcgcgcttggctgcagaggggcctatctcggtcgacgtgggcgcg
ctagtgcatgtcttggctcgtttaaaccagaacttaaactgggcgaacgcgatccatgca
ttcgaccgaccagatcgtcatggcgtggagacgtcgaccctgaagctactcattgccatt
ctccttagctgtcctcttgagtcagaacatcacgcagtttcaggtttctggcagatttgg
aacaattcgctttaccagctgcgcctcctagatgctctcctctctctgcctagcgacact
ttcaacttcgtgaccttgcctggtcgacgtatcgtctccaccgatgacatccccgcgact
agtccgagcatcaaggcgttggctgcaaacgtgcaggtgcacacttggaattcgctggat
ctattcgaggttcttgttggtttagcggactccgagtccttggaagtccgcaacttcgtc
cgggaaatgctagacaaggcagtcaagattagcgcagagattgttcaaatgggtctcttg
caggtggcaggtttgccctggggggagatccgacttgagtactcccagcgactgctcacg
atgttcttggcagggcatcctaaccatcagctggtgttcatgaggatctggcagattgag
ccgaaatatctcctaaactcgttgcgagagttctacgaggagaaccccctgaacatcact
cgcatcctagatgtggcgcaggatttgaagattttggatcatctcctcgattgcaagccg
tttgcgtttgctttggatgttgctgcgctcgcgtctcgccgcgaatacttgaatctcgac
aaatggcttgcggacaacgtgaccgctcatggtgctgacttccttcatggcgtcatcggc
ttcctcgactcgaaaatggaaagcgagaagtcaactcgagtttccgaccctgctgtggaa
tctcgcacgatgccgctcagcccccagactataacaatcttcctccgcgtcctccgcgct
aattccaatctcatgcacgagagcgacgtcgactattgtctcgaagtccgtaatgcctgt
cttcagattcacccacgcctcatgaacctgatgcccggcacggacgtcgaacccggcttc
accgtcgtcacctactctcaggaggtcgaagcggaagtcgattcgatctacaagcagatg
tacgatgagcacaacacaattgacgaggttatcgccttgctgcaacgcaacaagaactcc
aataacccccgtgaccacgagatcttctcctgcatgctgcacttcctgttcgacgagtac
aagttcttccaatcgtactaccctcctcgcgagttggccatgacaggctatctgttcggg
tcgctcatccaataccaactggtagattacatccccttaggtgtagctatccgctacgtc
ttggatgccctgaactgcccgccagaaaccaacctcttcaaatttggtctgcaggctctc
gtcaggttcgagtctcgcctgcccgagtggcaacccctgtgccaggcgctcctcaagatc
ccgcatctcctagatgcgcgccccgagctcgtcaatattctcggacgggcgattgccatg
ggcggtgaaggccagaataataccgctgacttgcgcacgcttcctggtggcaccattcct
gaagcaccatcagctttcaccgccgttcgcctagacttaactgacggcagcccggagtcc
cctgctgaagaggtatccgacaagatactcttcattgttaacaaccttgccccttcgaac
ttcgacgccaagctgacggagatgaaggagcaatttcaagagcagcactctcggtggttc
gccaattaccttgtggaccaacgtgtcagtaccgagccgaacaaccaccaactgtacctt
cgcttcctcgacgctctcaatatcaaggcgctattcaacttcgtcctgcatgagactttc
gtgaagtccgctcaacttctcaactccgagaaaactcttcaggtggcttcagaaagaaca
gtcttgaaaaacgttggagcatggctcggtagcattaccttggcgcgcgatcgtcccatc
aagcacaagaatctatccttcaaagacctcttgattgaaggtttcgataacggacgcctc
atcgtagcgattccgtttgtctgcaaaactctcgagccatgcgctaggtctaaggttttc
gggccgccgaacccgtggttgatggcggtcatttcactcctcgcagagttataccactat
gctgaactcaagctcaacctcaaattcgagatcgaggtgctttgtaagagtctcgacatc
gacctcgaggcagtccaggcgacgactattcttcgtaaccgtccgctttccgattctgga
ccgcagctgcctgagtaccctagtaacattgattcgctgcccatgggagggtacgatccg
gcccgcatgcagtccgacggtcaggtcatcgctcttagcggcgcccgtgcctctgatcag
cgtgctctggatgcgcacatcgagaacatcttggcgagtgtgctacctatggtggtcatc
aatcccgctttggcgcctttgaacaccaaccaatctttcaagcgtgcgatccaggtggcc
gttgagcgttcgattcgcgagatcatcatgccggttgttgagcgttctgtcacgatcgcg
ggcatctctactcgtgaacttgtcctcaaggattatgtgactgaacagagcgaagaaaag
ctgcgtcacgctggccggctcatgagccagaagcttgcaggaagcttggcccaggtcacc
tgcaaggagcctttgaggggaaaccttgctagccatctccgcgtggttttgaccgaattc
ggcttcgctgagattgtctctgaggaaattatcaccctcgttgtcaacgacaacgtcgac
attgcatgccaggccatcgagaaagcagcaatggatagggccgccctcgaagttgatgag
gcattcgcctcgcacttcgaagccaggaggcggcaccgcgagcaacgccctggacagccg
ttttgggaccctgccatccctgcctcgtcgcagttttccgctatcttgcccgaccccctg
cgtatccggccaatgggcgtacagcccatccaggcggccgtttacgaggactttgccacg
gatgggaagcggcgcacaggcgtgatcagtcgccctggctccacagtgtcttacactcac
aacgaccctctctcgtccatctataacccttctcccgcgccagatgcggttcagggcagg
acgttactgtcacatgttgacatcatggataggttcactgcgctgattaaagaccttgag
agcgtccttcctcagcttccgattcagtcgttaactgctttgccacctaaccacgagatt
cgccagctccttcgcgaaatccttttcctggcagccagctcagcagatcaccaacgcacc
ccgctgttaatgtcgcagaagattgttcagcttctgtacaaaagcagcatgcagctcggg
cgcgagatttatgtcgctttactggacaagctgtgccactcgttcgaagaggtagcaaag
gaggccattaactggttgatatacgccgaggacgagcgcaagttcaatgtccctgccact
gtcaccctacttcgcagcggtctcgtcaatctcggccaagaggatcaacagctcgccaag
ttcctatacactgagcccaagccgtcgttgctcaattttgctgctggtctgattcgcgaa
tgcttgtcgagtgacccaccggtcgcttcgcaggctcagttcgcttacactttggagatc
ctgacacaactcgctcagcaaggaaaggctaatgacgaggtgttgagacttcttgaagac
ctgcgtggcgtgcgccgtccttccaccacggcacctgacgcaggaatcgcgcggcagccc
tcagtgaagcctgagaacgactcgctcagggaaaagctgtttatctggttccaacaatgg
gtccacatctaccagcgctccccgttacctgaaaaatctttcgtacctttcatcagccag
ctgacgaagcagggaatcctgaaggccgaggacgtctcttcgttcttcttccgagtctgc
atggagtcgagcgtcaacagctatgtgaaatgcgtcaattctggagagttcgacttcgcc
ttcatagctctcgatgctttctcgagactcatcgtgtacatgatcaagtatcacggtgat
gcttcgggcgtgaacaacgagcaggcaaaggtgcactacctcaccaagattttgtctatc
gtcgtcctggtgttggcgaacatgcacgaggagcagggactcttgttttcccagaagccc
ttcttccgcttcttctccagcctcttgaacgatcttcatgcgattgagagcaatctcagc
gtcgtatacttcccgctcctgctagccgtcagtgacactttcagctcgctccagcctacc
ttcttcccgggtttcgcattctcctggacgagcttgatttcgcaccggctgttcatgcca
aagttgctactatccgagaatcgcgagggttggtctaccttctacaggctgttgcttgcg
ctgttcaagttcttgactcccttcctgaaggcttccgacctgcagcctgccactcgggac
ctctaccgtggttctcttcgacttctacttgtcctgctacacgacttccccgaattcctc
agcgagtattacttcacgctttgtgacataatccctccccactgcatacaactgcgcaac
gtcattctcagcgcgttcccacctacaatcatcttacccgaccctcacctccgtaacgtt
aagttcgattccatcccggagatgggcccgataccccctgtgttgtcagacttctcctcg
gtcctcaaggccggagacctccgcacctatctggaccagtatctattgaaccgtggttcc
ccgtccttcctgccctcgctcaaggaccaccttcttctctccgaaggttcgaccgacaga
tacaacctttcgctcatgaacgctctcgtcatgtacatcggtgtatcctccgttgctcag
gcgaaggccaggagcggcagctcgctcttcgtagctagtgacccaggtgtagtcgcactg
cagtaccttgctaccaaccttgacgtcgaaggtcaacatcaccttttgagcgccatggta
ctgcacttgcgctaccccaatgcgcacacgcattggttcagctcgctcatgctgcacctc
ttctacgagctcaaggacgataagttcagggagatcatgacgaaggttctcctcgagcgc
ttcctcgtccaccgccctcacccttggggagcattggtcacgttcatcgagctactcagg
aactcaaagtacgacttctggaaccacgacttcattcgcattgcacctgaagtaacgctt
ttgctcgaaactgtcgcaaggtccattttccaatcctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (47)   

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