KEGG   Phanerochaete carnosa: PHACADRAFT_173451
Entry
PHACADRAFT_173451 CDS       T03128                                 
Name
(RefSeq) hypothetical protein
  KO
K10739  replication factor A2
Organism
pco  Phanerochaete carnosa
Pathway
pco03030  DNA replication
pco03420  Nucleotide excision repair
pco03430  Mismatch repair
pco03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pco00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PHACADRAFT_173451
   03420 Nucleotide excision repair
    PHACADRAFT_173451
   03430 Mismatch repair
    PHACADRAFT_173451
   03440 Homologous recombination
    PHACADRAFT_173451
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pco03032]
    PHACADRAFT_173451
   03400 DNA repair and recombination proteins [BR:pco03400]
    PHACADRAFT_173451
DNA replication proteins [BR:pco03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    PHACADRAFT_173451
DNA repair and recombination proteins [BR:pco03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     PHACADRAFT_173451
   MMR (mismatch excision repair)
     PHACADRAFT_173451
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     PHACADRAFT_173451
SSDB
Motif
Pfam: RPA_C tRNA_anti-codon RMI2 MarR_2 tRNA_anti_2
Other DBs
NCBI-GeneID: 18909633
NCBI-ProteinID: XP_007395669
JGI: Phaca1_173451
UniProt: K5VV13
Position
Unknown
AA seq 269 aa
MSQYNDYYSNKNEGGGFMASPGFDSPSSAVRRQNSQHALRPVTVKQLLSASQVHADAEFR
IDDMELGHITVVGQVVQVKSQTTNSTYTLDDGTGRYEARHWNDANAGEDDKGIKENTYIR
VMGTLKSFGGRNYINATHIRPCKDPHEPYYHTLEAMAVTLMFQRGPPSGSDQQNGHMLVQ
KAGTNGASAYTAQASKNGAHDQFAFLPELQRKIVNFILSQQSHTDGIHVSAIARAVGGDA
HAISSALDQLMDEGHVYTTCDESHFDVSV
NT seq 810 nt   +upstreamnt  +downstreamnt
atgagtcaatacaacgactactactcgaataagaacgagggcggaggcttcatggcgtcc
cctggattcgacagtccgtcaagtgcagttaggaggcaaaattcgcaacatgcgctgcgg
ccggtaaccgtcaagcagctcctgagtgcctcccaagtccacgcagatgccgagttcagg
attgacgacatggaacttggacacatcacagtcgtcgggcaggtcgtccaggtcaagagc
caaacgacgaacagcacgtatacgctcgatgacggcactggtcgctacgaggcgcgccac
tggaatgacgcaaatgcaggagaagacgacaagggaatcaaagagaacacatatattcga
gtgatgggcactctcaagtcgttcggcggcaggaactacatcaacgcgacacacatacga
ccttgcaaggatccacatgaaccatactaccacacattggaagcgatggccgtgacacta
atgttccaacgtggaccaccctcagggtctgaccagcagaacggccatatgcttgttcaa
aaggcaggtacaaacggcgcgtcggcatacactgcacaggcgtcgaagaacggcgcccac
gaccagttcgcgttcctgcccgaactacagcggaagattgtcaacttcatcctctcgcag
cagagccatacggacggcattcatgtcagcgccattgcacgcgcggttgggggagatgcg
catgccatcagctccgcgttggatcagctcatggatgagggtcacgtctatacaacctgc
gatgagagccatttcgatgtctccgtttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (36)   

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