KEGG   Phanerochaete carnosa: PHACADRAFT_255854
Entry
PHACADRAFT_255854 CDS       T03128                                 
Name
(RefSeq) hypothetical protein
  KO
K07466  replication factor A1
Organism
pco  Phanerochaete carnosa
Pathway
pco03030  DNA replication
pco03420  Nucleotide excision repair
pco03430  Mismatch repair
pco03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pco00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PHACADRAFT_255854
   03420 Nucleotide excision repair
    PHACADRAFT_255854
   03430 Mismatch repair
    PHACADRAFT_255854
   03440 Homologous recombination
    PHACADRAFT_255854
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pco03000]
    PHACADRAFT_255854
   03032 DNA replication proteins [BR:pco03032]
    PHACADRAFT_255854
   03400 DNA repair and recombination proteins [BR:pco03400]
    PHACADRAFT_255854
Transcription factors [BR:pco03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    PHACADRAFT_255854
DNA replication proteins [BR:pco03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    PHACADRAFT_255854
DNA repair and recombination proteins [BR:pco03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     PHACADRAFT_255854
   MMR (mismatch excision repair)
     PHACADRAFT_255854
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     PHACADRAFT_255854
SSDB
Motif
Pfam: Rep_fac-A_C REPA_OB_2 tRNA_anti-codon Rep-A_N Ssb-like_OB DUF223
Other DBs
NCBI-GeneID: 18916408
NCBI-ProteinID: XP_007395648
JGI: Phaca1_255854
UniProt: K5W851
Position
Unknown
AA seq 540 aa
MLATPLNELVENGQLTKNSIVVADEFSCNYVGENKGRLLIILRLTPLASPNEKIGSPTAI
QGAVGSNGKPISSAGGTPTPASAPKAAPKAAPQPAPAMHNNASNQQRHTFPIEGLSPYQN
NWTIRVKVTQKSDIRQYSNARGDGKLFSAVLMDDTGEIKATAFNNNVDEFYPKLEEGKIY
YISKGQVSLAKKKFNNVNNEYELGLQRGTIIEECRDGPVLNIHYKFIPLDQLMNTNPGDT
IDVLGIVKEMSDVTHLTSRQGNDLTKRELTIVDRSGASVRLTLWGKQADRYCESGEPIIA
WKSVKVGDFGGRSLSMLSSSSMEINPDIPDAHVLRGWYDTDGKVQDFQPQTSSAPRGSGG
AFNRDEIRLLDDVRSANLGGGDKPDFFSAHATIMHIKSDNIAYPACQNQGCNKKVIEQHD
GWRCEKCDKVFERPSYRYIMAMAVADHSGQVWFQCFNEAGVVIFDMTADQLVELKDRDDA
QYNKVLESAVGTTYNFTCRAKMESFQENNRVRYGVQKILPLDYKEEGNYLMKLLSSPWAQ
NT seq 1623 nt   +upstreamnt  +downstreamnt
atgctcgcgacaccgctcaacgagcttgtagaaaatggccagctcacaaagaactcgatc
gtggtcgctgacgaattctcgtgtaattacgtcggcgagaacaaaggtcgccttctcatt
atactccgcctcactcctctggccagcccgaacgagaagattggctcgcctacggccata
caaggcgcggtaggcagcaatgggaaacctatctcgtctgccggcgggacgccgacccct
gcttccgctccgaaagccgccccgaaagccgcccctcagcccgcacctgcaatgcacaac
aatgcgagcaatcagcagcgccacaccttccctatcgaaggtctcagtccttaccagaac
aactggacgatccgtgtgaaggttacgcagaagagcgatatccgccagtactcgaatgcg
cggggagatggcaagctcttcagcgccgttctcatggacgatacaggcgagataaaggca
accgctttcaataataacgtcgacgaattttatcccaagttggaggagggcaagatctac
tacatctcgaaaggtcaagttagtctcgcgaagaaaaagttcaacaacgtcaacaacgaa
tacgagcttggccttcaacgaggcaccatcatcgaagagtgccgtgacggaccagtactc
aacatccattacaagtttattccattggaccagctgatgaatactaacccgggagatacc
attgacgtgttgggtattgtgaaggagatgagcgatgtcacgcacctcacctctcgtcaa
ggcaacgatttgacaaaacgtgaattaactatcgtcgaccgctctggcgcatccgtacgt
ttaactctctggggcaagcaagcggaccgctactgcgagtcaggggagcctatcatcgct
tggaagagcgtgaaagtcggcgacttcggtggtcgcagcttgtcaatgctcagctccagt
agcatggagatcaatccggatattcctgacgcccatgtcctgagggggtggtatgacact
gacggcaaggttcaggatttccagccccagacgagctctgctccacgaggcagcggtggt
gccttcaaccgtgacgagattcgcttgttggatgacgtccgaagcgcgaacctcggtggc
ggagataagcctgacttcttctctgctcatgcgacgatcatgcatatcaagtcggataac
atcgcatacccagcgtgtcagaaccaaggctgcaacaagaaggtgatcgagcagcacgac
ggctggcgttgcgagaagtgtgacaaggtgtttgaaaggccttcctaccgctacatcatg
gctatggctgtcgccgaccactccggtcaggtgtggttccaatgcttcaatgaagctggt
gttgtcattttcgacatgactgccgatcagctcgtagaactcaaggatcgcgacgatgca
cagtataataaggtactcgaaagcgccgttggcacgacgtacaacttcacctgtagagcg
aagatggagagcttccaggaaaataaccgtgttcgctacggtgttcagaagattcttcct
ctcgactacaaggaagaaggcaactacctcatgaaacttctgagctcgccttgggcacag
tag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (32)   
   KEGG ORTHOLOGY (1)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (50)   

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