KEGG   Phanerochaete carnosa: PHACADRAFT_266254
Entry
PHACADRAFT_266254 CDS       T03128                                 
Name
(RefSeq) hypothetical protein
  KO
K10881  26 proteasome complex subunit DSS1
Organism
pco  Phanerochaete carnosa
Pathway
pco03050  Proteasome
pco03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pco00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    PHACADRAFT_266254
  09124 Replication and repair
   03440 Homologous recombination
    PHACADRAFT_266254
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pco03019]
    PHACADRAFT_266254
   04131 Membrane trafficking [BR:pco04131]
    PHACADRAFT_266254
   03051 Proteasome [BR:pco03051]
    PHACADRAFT_266254
   03400 DNA repair and recombination proteins [BR:pco03400]
    PHACADRAFT_266254
Messenger RNA biogenesis [BR:pco03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     PHACADRAFT_266254
Membrane trafficking [BR:pco04131]
 Exocytosis
  Tethering complex
   Exocyst complex assembly proteins
    PHACADRAFT_266254
Proteasome [BR:pco03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    non-ATPase subunits
     PHACADRAFT_266254
DNA repair and recombination proteins [BR:pco03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     PHACADRAFT_266254
SSDB
Motif
Pfam: DSS1_SEM1
Other DBs
NCBI-GeneID: 18919348
NCBI-ProteinID: XP_007402835
JGI: Phaca1_266254
UniProt: K5WEK8
Position
Unknown
AA seq 106 aa
MSDKASSSKTEAAPPTKIIEPHKDDDHPAALGVLEEDDEFEEFPVADWDDSQTDLAHLGG
AAPGAAKSGGDKLWEDNWDDDDVEDDFSVQLRNELAKKNGTDAMQH
NT seq 321 nt   +upstreamnt  +downstreamnt
atgtcagacaaggcatcctcatctaagacggaggcggccccgcctactaagatcatcgag
cctcacaaggacgatgaccaccctgcagcacttggcgtactcgaggaggatgacgagttc
gaggagttcccggtggcagactgggacgactcgcagacagacctcgcacacctcggcggc
gctgctcccggagcggccaagtctggcggtgacaagctctgggaagataactgggatgat
gacgacgtcgaggacgatttcagtgtgcaactaaggaacgagctcgcgaagaagaatggc
accgatgcgatgcaacactag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (21)   

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