KEGG   Proteus columbae: F1325_00020
Entry
F1325_00020       CDS       T06419                                 
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
pcol  Proteus columbae
Brite
KEGG Orthology (KO) [BR:pcol00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pcol03032]
    F1325_00020 (gyrB)
   03400 DNA repair and recombination proteins [BR:pcol03400]
    F1325_00020 (gyrB)
Enzymes [BR:pcol01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     F1325_00020 (gyrB)
DNA replication proteins [BR:pcol03032]
 Prokaryotic type
  DNA Topoisomerases
   F1325_00020 (gyrB)
DNA repair and recombination proteins [BR:pcol03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      F1325_00020 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB GyrB_insert DNA_gyraseB_C Toprim HATPase_c GyrB_hook DUF6865 HATPase_c_3
Other DBs
NCBI-ProteinID: QHN08953
UniProt: A0A6I7D3S8
Position
3630..6044
AA seq 804 aa
MSNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGFCDEII
VTIHSDNSVSVRDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSEKLELTIHRDGNIHQQIYRHGVPDDRLKVIGDTEKSGTFVRFWPSLETFKGET
EFQYEILAKRLRELSFLNSGVSIRLIDKRDNREDHFHYEGGIKAFVEYLSRNKTPIHQNV
FYFSTEKDNIGVEVAMLWNDGFQENVYCFTNNIPQRDGGTHLVGFRTAMTRTLNNYMDKE
GFNKKSKISATGDDAREGLIAVISVKVPDPKFSSQTKDKLVSSEVKTAVETLMNEKLVEY
LLENPNDAKIVVGKIIDAARAREAARKAREMTRRKGALDLGGLPGKLADCSERDPAFSEL
YLVEGDSAGGSAKQGRNRKTQAILPLKGKILNVEKARFDKMLASQEVATLITALGCGIGR
DEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIIERGHIFIAQPPLYKVKKG
KQEQYIKDDDAMDEYLMSIALDGAALYVSEHAPAMHGEQLEKLVVDYHAAHKIIRRMERI
YPLSMLNSLVYHSTLTEDALSDKAKVEEWMSGLVNRLNEAEDQGSTYSYTIAQNDENRLF
EPVLRIRTYGVDTDYKLDYDFIHSSEYQRITHLGDIIGNLIEEGAFIERGERRQPISSFE
EALEWLTKESRRGLAVQRYKGLGEMNPEQLWETTMNPDTRRMMQVTVKDAIATDELFTTL
MGDAVEPRRAFIEENALKAANIDI
NT seq 2415 nt   +upstreamnt  +downstreamnt
atgtcgaatacatatgactcctcaagtatcaaagtattaaaagggctggatgcggtgcgt
aagcgcccggggatgtatatcggggatacagatgatggaaccggtctgcatcacatggtc
ttcgaggtggtcgacaacgcaatcgacgaagccctcgcgggtttctgtgatgagataatt
gtcactatccattcagataactccgtctctgttcgagatgatggtcgtggaattccaacc
ggcattcacccagaagagggtgtctcagcagcagaggttattatgaccgttctgcatgcg
gggggtaaattcgatgataactcctataaagtctctggtggacttcatggtgtaggggtt
tctgttgttaatgcgttgtctgaaaaacttgaactgacaatccatcgtgatggaaatatc
catcaacaaatttatcgtcatggtgtgcctgatgatcgcttaaaagtgattggcgatact
gaaaaatcagggacatttgtacgcttctggccaagtcttgaaacctttaaaggtgagact
gaattccagtatgagatcctagcaaaacgtcttcgtgagttgtcattcttaaactcaggc
gtttctattcgtttaattgataaacgtgataaccgagaagatcatttccactatgaaggc
ggtattaaagcattcgttgaatacttaagccgtaacaaaacgcctattcatcaaaacgta
ttctatttctcaacagaaaaagacaatattggtgttgaagtggcaatgttgtggaatgac
ggtttccaagagaacgtttattgctttaccaacaatattccacaacgtgatggtggtact
cacttagttggtttccgtactgcaatgacacgtacgttaaacaactatatggataaagaa
ggttttaataagaaatcgaaaatcagtgcaacgggtgatgacgctcgtgaaggcttgatt
gcggttatctctgttaaagtcccagatcctaaattctcatcacaaacaaaagataaactg
gtttcttcagaagtgaaaacagcggtagaaacgctgatgaatgagaaactggtggaatat
ctgttagaaaacccaaatgacgcgaaaatcgttgtcggcaaaattattgatgctgctcgt
gcgcgtgaagctgcacgtaaagcgcgtgaaatgactcgtcgtaaaggcgcattagattta
ggtggcttaccgggtaaattagcggactgttctgaacgtgatcctgctttctctgaactg
tatttagtggaaggggactctgcgggtggctctgcaaaacaagggcgtaaccgtaaaaca
caggctattcttccgttaaaaggtaaaatcctaaacgttgagaaagcgcgctttgataaa
atgttggcatctcaagaagttgcaacgttaatcactgcattaggttgtggtatcggtcgt
gatgaatataacccagataaactgcgttatcacagcattatcatcatgacggatgcggac
gtcgatggttctcacattcgtactctgttactgaccttcttctatcgtcaaatgccagaa
attatcgaacgtggtcatatctttattgctcagccaccactttacaaagtgaagaaaggt
aaacaagagcaatacatcaaagatgatgacgcaatggacgagtatctgatgtcgatcgct
cttgatggtgcagcactgtatgtgagcgaacacgcacccgcaatgcatggcgagcaactt
gaaaaactggttgttgattaccatgcagcgcacaaaattattcgtcgtatggagcgtatc
tatccacttagcatgttaaacagcttggtgtatcactcaacgctgacagaagatgcgtta
tctgataaagccaaagttgaagagtggatgagtggcttggttaaccgcttaaacgaagcc
gaagatcaaggcagtacttatagctacaccatcgctcaaaatgatgaaaatcgtctgttc
gaacctgtattacgtattcgtacttatggtgtggatacagactacaaattggattatgac
tttatccacagtagcgaatatcaacgcattacgcatttaggtgacattatcggtaaccta
attgaagagggtgcgtttattgagcgaggtgaacgtcgtcagccaatttcaagttttgaa
gaagcacttgagtggttaacaaaagaatcacgtcgtggtcttgctgtacagcgttataaa
ggtcttggtgaaatgaacccagagcaattatgggaaaccaccatgaatccagatacacgc
cgtatgatgcaagtcaccgtgaaagatgcgatcgcaactgatgaattatttaccacctta
atgggtgatgcagttgaacctcgtcgtgcctttatcgaagagaatgcgctgaaagcggca
aatattgatatctag

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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