KEGG   Proteus columbae: F1325_10960
Entry
F1325_10960       CDS       T06419                                 
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
  KO
K01439  succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
Organism
pcol  Proteus columbae
Pathway
pcol00300  Lysine biosynthesis
pcol01100  Metabolic pathways
pcol01120  Microbial metabolism in diverse environments
pcol01230  Biosynthesis of amino acids
Module
pcol_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pcol00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    F1325_10960 (dapE)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:pcol01002]
    F1325_10960 (dapE)
Enzymes [BR:pcol01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.18  succinyl-diaminopimelate desuccinylase
     F1325_10960 (dapE)
Peptidases and inhibitors [BR:pcol01002]
 Metallo peptidases
  Family M20
   F1325_10960 (dapE)
SSDB
Motif
Pfam: Peptidase_M20 M20_dimer Peptidase_M28 Peptidase_M18 DUF6172
Other DBs
NCBI-ProteinID: QHN10952
UniProt: A0A6I7DAE7
Position
2292353..2293483
AA seq 376 aa
MSCPVIELAQQLISRPSISPDDQGCQQLIIDRLAPLGFTIERMPFGETENLWACRGGEGE
TLAFAGHTDVVPTGDLDLWDNPPFEPSIRDGLLYGRGAADMKGSLAAMIVAAERFVRSYP
DHRGRLAFLITSDEEAKAADGTVKVVQSLMSRGERLDYCLVGEPSSQHHLGDMVKNGRRG
SITANLIIQGVQGHVAYPHLAENPIHLASPFIQELVNTVWDEGNEFFPATTMQIANIHAG
TGSNNVIPGELFIQFNFRFSTAITDEEIRQRTEALLQKHQLRYQLEWSLSGQPFITGQGK
LLEAVRYSVKHYTNLEPELSTSGGTSDGRFIAQMGAQVVELGPVNATIHKVNECVNAADL
QQLSRIYQRVMEQLIL
NT seq 1131 nt   +upstreamnt  +downstreamnt
atgtcctgtcctgttattgagcttgcacaacaactgatttcgcgtccctcaatcagccct
gatgatcaaggttgtcagcaactgattatcgataggcttgcccctcttggttttacgatt
gaaagaatgccttttggtgaaactgaaaatctctgggcttgtcgtggtggtgaaggcgaa
acactagcctttgctggtcatactgatgttgtaccaacaggtgatcttgatttgtgggat
aacccgccttttgaaccatctattcgtgatggtctgttatatggacgcggtgcggcggat
atgaaaggctcgcttgccgccatgattgtcgctgctgaacgttttgttcgctcttatcct
gatcaccgtggacgactggcctttttaattacatcggatgaagaagccaaagccgcagac
ggcacggttaaagtcgtacaatctttaatgtcgcgtggcgaacgtctcgactattgcctt
gtgggtgagccttcaagccaacatcatttaggcgatatggtaaaaaatggtcgtcgaggc
tcaataacagcaaatttaattattcaaggtgtgcaaggtcatgtcgcttaccctcacctt
gcggaaaatcctattcatcttgcctccccttttatccaagagctcgttaatactgtttgg
gatgaaggcaacgagtttttcccagcaactacaatgcaaattgccaatatccatgcaggt
acaggcagcaataatgtgatccccggtgagctgtttattcaatttaatttccgctttagt
actgccattacagatgaagaaattcgccaacgtacagaagcgttactacaaaagcatcaa
cttcgctatcagttggaatggtctttatctggccagccttttattaccggccaaggtaaa
ttacttgaagctgtccgttactccgttaagcattacaccaatttagagccagagctttcc
accagtggaggcacttctgatggtcgatttattgcccaaatgggcgcgcaagttgtcgaa
ttaggccctgttaatgcaacaattcataaagttaatgagtgtgttaatgcggcagattta
caacagcttagccgaatttatcagcgggttatggagcaacttattttatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (23)   

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