KEGG   Pseudomonas chlororaphis subsp. aurantiaca: JM49_10725
Entry
JM49_10725        CDS       T03338                                 
Name
(GenBank) type IV secretion protein Rhs
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
pcp  Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pcp00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    JM49_10725
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pcp02044]
    JM49_10725
Secretion system [BR:pcp02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   JM49_10725
SSDB
Motif
Pfam: Phage_GPD DUF2345 T6SS_Vgr Phage_base_V DUF6484 Bac_rhamnosid-like_N MBG_3 DUF3540
Other DBs
NCBI-ProteinID: AIS12139
Position
2325922..2328420
AA seq 832 aa
MRQRDLRFTFSVPSGRMEFEVVAFTLEEAISEPYRLTLELASDNPAIDFAQVLDQPALLT
IWQGSTAVRHVHGLVSSFTQGKTGFRRTRYRVVVEPQLARLGLSSNWRIFQQKSVPEILK
SVLAEHGILDYQQNTHTEHLPREYCTQAGDTDLYWFDRLSTEEGLFYYFKSDATSHTLIQ
SDKLYVQERIQGEPVLYSTQPAGDAERPVLYAFSYTENVRTAEQTQRDYTFKRPAFNQQQ
RLVGEDLEHQAPHYERYDYPGRYKASAAGKPFTENRLRGHRRDAQVAMVEGDDPRLIPGL
SFQLTGHPREDFNRWWRSVRITHRGVQHASQQEESADAEMGVSYDFTAEIIPEQMEWRPV
PLPRPRIDGPQIASVVGPEGEEIHTDEFGRVKVQFPWDREGKDNEFSSCWIRVSQNWAGA
DWGHMAIPRIGQEVIVDYLDGDCDQPIITGRTYRASNMPPYQLPNHKILSTIKSKEYKGS
RANELRIDDTTKEISAALMSDHGSTALHLGYLTHPRPDGGAPRGEGFELRTDEHGALRAA
KGLLLSTEEQLNANGGHLNRAVAVQVLEAALQLAKDLGDYAADHEGVGHDTAPQKTLSDA
VRDLGHGANDESGKTNGGNPAIALSGQAGIAAVSPNSITLAAGEHIDSVAQQNQQLTSGQ
KFVVNAGTDLGLFAQSGEMRHIAHQGPMLVQAQKNNIRVEADQSVEVSASKQHVLIAAKE
HITLMCGGAYLTLKGGNIELGMPGNFTVKAAKHSLVGPAHASTTFNTWSQTPFNERVRVV
RNGKPLPNYRYALTRSDGARLEGITDGDGWAEMQQSLTTEGYEFHLLGPGET
NT seq 2499 nt   +upstreamnt  +downstreamnt
atgcgtcaaagggatttgagattcaccttctccgtgccgtccggccggatggagttcgag
gtcgtagcgttcaccctggaagaagccattagcgagccttatcggctgacgctcgaactg
gccagtgacaaccccgccatcgattttgcccaggtcctcgatcagccggcgttgctgact
atctggcaaggctccacggctgtccgccatgtccacggtttggtctccagcttcacccag
ggcaaaaccggctttcggcgtacccgctaccgcgtggtggtcgagccgcagcttgcccgg
cttggcctgagttccaattggcgcatcttccagcagaaaagcgtgcccgaaatactcaag
tcggtgttggccgagcatggcatcctggactatcagcagaacacccataccgagcacctg
cctcgcgaatactgtacccaggcgggggacactgacctttactggttcgacaggctttct
acggaagaaggtttgttctactacttcaaatccgacgcgacctctcacacgctgatccag
agcgacaagctctacgttcaggaacgcatccagggtgagccggtgctgtacagcacgcag
ccggctggagacgctgaacggcctgtgctgtacgcgttcagctacacggaaaacgtccgc
acggccgaacagactcagcgcgactacaccttcaagcgtcccgcgttcaaccagcaacag
cgcctggtcggcgaggacctggaacaccaggctccacactatgagcgctacgactatcca
ggacgctacaaggccagtgcagccggtaaacccttcactgaaaaccgcctgcggggccac
cgtcgagatgcccaggtcgcgatggtcgaaggtgacgatccgcgcctgattccaggcctt
tccttccaactgaccggccacccccgggaagatttcaaccgctggtggcgatcggtccga
atcacccacagaggcgtgcagcacgccagccagcaagaagagtccgccgacgctgaaatg
ggcgtgagttacgacttcaccgccgagatcattcccgagcaaatggagtggcgcccggta
cctctgcccaggccccgtatcgacgggccgcagatcgccagcgtggtgggcccggaaggc
gaggagatccacaccgatgagtttggccgggtaaaggttcagttcccctgggatcgggaa
ggcaaggacaacgagttcagctcctgctggatccgggtatcacagaactgggccggtgct
gactggggccatatggcgatcccgcgaattggccaggaagtcatagtcgactacctcgat
ggcgactgtgaccaaccgatcatcaccggccgcacttaccgtgcgagcaacatgccgccg
tatcaactgccgaatcacaagatcctcagcaccatcaagagcaaggaatacaaaggcagc
cgcgccaacgaactgcgtatcgacgacaccaccaaagagatcagcgccgcgctgatgagc
gatcacggcagcaccgcactgcacctggggtacctgactcacccgcgccccgacggtggc
gcgccgcggggtgaaggtttcgagctgcgtaccgacgagcatggtgcgttgcgcgcggcc
aaggggctgttgctcagcactgaagagcaattgaatgccaatggtgggcatctgaaccgg
gcggttgctgttcaggtattggaggcggctctgcagctggccaaggacttgggtgactat
gctgcggaccatgagggtgtaggtcatgacaccgcgcctcaaaagacgctcagtgacgcg
gttcgcgatctggggcatggggccaacgatgaatcgggcaaaaccaacggtggtaacccc
gccattgccctgagtggtcaggccggtatcgctgccgtgtctcctaacagcatcaccctg
gcggctggcgagcatatcgacagcgtggcccagcagaaccagcaactgacgtcagggcag
aagtttgtggtcaacgccggcaccgacctggggttgttcgcgcaaagtggcgagatgcgc
catatcgctcaccaggggccaatgttagtgcaggcccagaagaacaacatccgcgtagag
gcggatcagagcgtggaagtcagcgcgagcaagcaacacgtgctgattgcggcaaaggag
cacatcacgctgatgtgtggtggtgcctaccttaccctcaagggcggcaacatcgagctg
ggcatgccaggcaactttaccgtcaaggcggccaagcacagtctcgtcggaccggcacac
gcgtccaccaccttcaatacctggtcccagacgccttttaatgagcgtgttcgtgtggtg
cgtaacggcaagccgctacccaattatcgttatgcgctcacgcgtagtgatggcgctagg
ttggaaggcatcactgatggtgacggttgggctgaaatgcagcagagcctcacgacagaa
ggttatgagttccacctgcttggccctggtgagacatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (15)   

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