KEGG   Pseudomonas chlororaphis subsp. aurantiaca: JM49_16805
Entry
JM49_16805        CDS       T03338                                 
Name
(GenBank) chromosome segregation protein SMC
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
pcp  Pseudomonas chlororaphis subsp. aurantiaca
Brite
KEGG Orthology (KO) [BR:pcp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pcp03400]
    JM49_16805
DNA repair and recombination proteins [BR:pcp03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     JM49_16805
    Archaeal homologous recombinant proteins
     JM49_16805
SSDB
Motif
Pfam: SbcC_Walker_B AAA_29 AAA_21 SMC_N nSTAND3 ABC_tran MMR_HSR1 cobW AAA_22 AAA_25 RsgA_GTPase
Other DBs
NCBI-ProteinID: AIS13249
Position
3712230..3715871
AA seq 1213 aa
MKILAIRLKNLASLAGPFEIDFSAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LNNIGRETKVPEVDSEMLTSDPRTLLRRGTGSGYAEVDFVGIDGHRYRARWETNRARDKA
NGKLQASKQSLHDLDSNQLLASQKRDYEQLIEAKLGLNFEQFTRAVMLAQSEFSAFLKAD
DKERSELLEKLTNTSIYSQLGRRAFIKNKEADEVHKTLKAQASGITPLEPEARAELDQRF
DTAQQQLKAQQAQLKQLELQHGWLKELQQLQDQQQNAAEQLQQAQTAWEGLASERTRLTR
LEQLAPQRHQFARQVELNQQLTPLREQIRQQRQQQGAEQQRQGELEQQLATAQAALLAAQ
EQQGTSAPLLREAFAEQSTLAHLGKTCGEAGELKDTLQQASEQGQQAIQAMLEQQRLVGE
RLQQIAEQLEHSSHLAPLSDAWNAYRDRLQQLMLAGNRLNKGQEELPGLQQRAASAAQQL
AAQRDELQVLYSEAGAEPHAVAEQLQILSDLLQDNRKQQRAFEELARLWASQQELDKRGA
ELADKLQTAARQREELNRIGLQSKAELTVAEQTLTVTQQLLERQRLARSASVEELREQLQ
DDQPCPVCGSHEHPYHQPEALLQSLGRHDESEEANARKAVDELKEKLAELRSQVGGLIAQ
QKEFLQQQEQLASQQQALAPSIEAHPLAAALLDQDAGKRDAWLNQQLSQLNQSIQQDEQR
QGALLKLQKDAARLQQQLQAAIEASQEATQQLTQQQQQLGADRQRLEEELSAFATLLPAD
TLEALRSDPAATFMQIDQQVMQRLEQLDQQKEEQQEQQQRQLALDKEQDRQQTRVQQLQA
AQEQFNTLAEQQQAARNKLAQLLGEHASAEQWQQHLEQAVEQARAADVQANQQLQEVRSL
LVQLGAELQGKAERLLGLEAEQQALGSKIADWRQQHPELDDGGLEQLLSLDDQQVAALRQ
QLQEREKAMEQAKVLVTEREQRLHSHQAQHDGQLDAEQLASALSELHNQLAASEQLSAEL
RAQQTEDQRRQDANQALGEQIAQAYAEWQRWARLNALIGSASGDTFRKIAQAYNLDLLVH
HSNAQLRQLVRRYRLKRGGSMLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQV
RRQGNGLSTLEVK
NT seq 3642 nt   +upstreamnt  +downstreamnt
atgaagattctggccatccgcctgaagaacctggcctccctggccggcccctttgaaatc
gacttcagcgccgagcccctggccagcgccgggctgttcgccatcaccgggcccaccggc
gccggcaagagcaccctgctcgacgccctgtgcctggcgctgttcggcgccgtgccgcgg
ctgaacaatatcggtcgcgaaaccaaggtgccggaggtggacagcgagatgctcaccagc
gacccgcgcaccctgctgcggcgtggtactggcagcggttacgccgaggtcgacttcgtc
ggcatcgacggccatcgctaccgcgcgcgctgggaaaccaaccgcgcccgggacaaggcc
aatggcaagctgcaggccagcaaacagagcctgcacgacctggacagcaatcaactgctg
gccagccagaaacgcgactacgaacagttgatcgaagccaagctggggctcaacttcgag
cagttcacccgcgcggtgatgctggcccagagcgagttcagcgccttcctcaaggccgac
gacaaggaacgcagcgagctgctggaaaagctcaccaacacctcgatctacagccagcta
ggccgtcgtgccttcatcaagaacaaggaagccgacgaggtccacaagaccctcaaggcc
caggccagcggcatcacccccctggagcccgaggcccgcgccgagctggaccagcgtttc
gataccgcccagcagcagctcaaggcccagcaggcgcagctcaagcaactggagttgcaa
cacggctggctcaaggaactgcagcagttgcaggaccagcagcaaaacgccgcagagcaa
ctgcaacaggcacaaacggcctgggaaggcctggccagcgagcggaccaggctgacccgc
ctggagcagctggcgccgcaacgccatcagttcgcccggcaggtggaactgaaccagcaa
ctgacgccgctgcgcgagcagatccggcaacagcgccagcaacaaggcgcagagcaacaa
cgccagggcgaactggagcaacaactggccacggcccaggccgcattgctcgccgcccag
gaacagcaaggcaccagcgccccgctgctgcgcgaggcctttgccgagcaaagcaccctc
gcccacctgggcaagacctgcggcgaagccggcgagctcaaggacacactgcaacaggcc
agcgagcaaggccagcaggcgatccaggccatgctcgaacagcagcggctggtgggcgaa
cgcctgcagcagattgccgagcagctggaacacagcagccatctggcgccgctgagcgat
gcctggaacgcctaccgcgatcgcctgcaacagctgatgctggccggcaaccggctgaac
aagggccaggaagaactgcccggcctgcaacaacgggccgccagcgcggcgcagcaactg
gccgcgcaacgcgatgagttgcaagtgctgtacagcgaagccggtgccgagccccatgcg
gtggccgaacagttgcagatcctcagcgacctgctgcaggacaaccgcaagcaacagcgc
gccttcgaagaactggcgcggctgtgggccagccagcaggagctggacaagcgcggcgcg
gaactggcggacaagttgcagaccgcggcgcgccagcgcgaagagctgaaccggatcggc
ctgcaaagcaaggccgagctgacggtcgccgaacagaccctgacggtgacccagcaactg
ctggaacgccagcgcctggcacgcagcgccagtgtcgaagagctgcgcgaacagttgcag
gacgatcagccctgcccggtctgcggcagccacgagcacccctaccatcagcccgaggcg
ctgttgcagagcctgggtcgccacgacgaaagcgaagaagccaacgcacgcaaggcggtg
gatgaactcaaggaaaagctcgccgaactgcgcagccaggtcggcggcctgatcgcccag
cagaaggaattcctccagcaacaggagcaactggcaagccagcagcaggccctggcaccg
agtatcgaagcccatccgctggcggcggcgctgctcgaccaggacgccggcaagcgcgac
gcctggctgaaccagcaactgagccagctgaaccagagcatccagcaggacgaacagcgc
caaggcgccctgctgaaactgcaaaaggacgccgcgcgcctgcaacaacaactgcaggcg
gcgatcgaggccagccaggaagccacgcaacagctgacccagcagcaacagcagctgggc
gcggatcgccagcgcctggaggaagagctgtcggccttcgccaccctgctgccggccgat
accctcgaagccctgcgcagcgacccggccgcgacctttatgcagatcgaccagcaggtc
atgcagcgcctggagcagctcgaccaacagaaggaagagcaacaggagcagcaacagcgc
cagctggccctggacaaggaacaggaccgccagcagacccgcgtgcagcaactgcaagcc
gcccaggagcagttcaataccctggccgagcaacagcaggccgcccgcaacaagctcgcg
caattgctgggcgaacacgccagtgccgagcagtggcagcaacatctggaacaggccgtg
gaacaggcgcgcgccgccgatgtgcaggccaaccagcagttgcaggaggtccgcagcctg
ctggtgcagctgggcgcggaactgcaaggcaaggcagaacgcctgctgggcctggaagcc
gaacagcaggcgctgggcagcaagatcgccgactggcgccagcagcacccggagctggac
gacggcggcctggaacagttgctcagcctcgacgaccagcaggtcgccgcgttgcgccag
caactgcaagagcgcgaaaaggcgatggaacaggccaaggtcctggtcaccgaacgcgag
caacgcctgcacagccatcaggcccagcacgacggccagctcgacgccgaacaattggcc
agcgccctgagcgaattgcacaaccagctggccgccagcgaacagctgagcgccgaactg
cgcgcccagcagaccgaggaccagcgccggcaagacgccaaccaggcgctgggcgagcag
atcgcccaggcctacgccgaatggcaacgctgggcgcggctcaatgccttgatcggctcg
gccagcggcgacaccttccgcaagatcgcccaggcctacaacctcgacctgctggtgcat
cactccaacgcgcaactgcgccagctggtgcggcgctatcgcctcaagcgcggcggcagc
atgctcggcctgctggtgatggacacggaaatgggcgatgaactgcgctcggtgcattcg
ctgtccggcggcgagaccttcctggtgtccctggcgctggccctgggcctggcgtccatg
gcctccagcacgctgaagatcgagtcgctgtttatcgacgaaggtttcggcagcctcgat
ccggaatccctgcaactggcgatggacgccctcgacggtttgcaggcccagggccgcaag
gtggcggtgatttcccacgtgcaggaaatgcacgagcggattccggtgcagatccaggta
cggcgccagggcaacggcctgagcaccctggaggtgaaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (11)   
   Pfam (11)   
All databases (17)   

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