KEGG   Pseudomonas chlororaphis subsp. aurantiaca: JM49_26615
Entry
JM49_26615        CDS       T03338                                 
Name
(GenBank) DeoR faimly transcriptional regulator
  KO
K21021  diguanylate cyclase [EC:2.7.7.65]
Organism
pcp  Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp02025  Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:pcp00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    JM49_26615
Enzymes [BR:pcp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.65  diguanylate cyclase
     JM49_26615
SSDB
Motif
Pfam: GGDEF CHASE8 HAMP sCache_3_2 Cadherin_C_2
Other DBs
NCBI-ProteinID: AIS15118
UniProt: A0A3G7KT80
Position
complement(5806236..5807504)
AA seq 422 aa
MSLFKSPVRPTLRSVIGRGHLIVALLAISMASLSLTLLGVLALRVYADHNLHLIARSINY
TVEAAVVFNDSAAATEALALIASTEEVAEAQVLDARGRVLAHWERPETGLLSDLQMQIAR
AFLEKPITVPIMYQGQEIGSVALTGHGGSLLRFLLSGLVGIVLCIAVSAWVALYLARRQL
RGITGPLRSLADVAHAARRERAFDVRVPPAKIAELDNLGNDFNALLDELEAWQTHLQSEN
ETLAHQASHDSLTGLPNRAFFEGRLIRALRSASKLNERVAVLFLDSDRFKGINDNFGHAA
GDAVLMAVASRVRAQLREEDLVARLGGDEFAILLTPLHRIEDAERIAEKIIASMELPIAL
PGSTSVLTSLSIGIAVYPDHGTTPGALLNAADAAMYQAKRVSRGGQHTAGSEPPVVHVQS
RS
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgagcctcttcaaatcgcctgttcgccctaccttgcgttcggtcattggccgcgggcat
ctgattgtcgccctgctggccatttccatggccagcctgtccctgaccctgctcggggtg
ttggcattgcgggtgtatgccgatcacaacctgcacctgatcgcgcgttcgatcaactac
acggtcgaagcggcggtggtgttcaacgacagcgccgcggcgaccgaagccctggccttg
atcgcctccaccgaagaagtggccgaggcccaggtgctcgatgcccggggccgcgtgctg
gcccactgggagcgtccggaaaccggtttgctgagcgatctgcaaatgcagatcgcccgc
gcctttctcgagaagcccatcacggtgccgatcatgtatcagggccaggagatcggcagt
gttgccttgaccgggcatggcggcagcctgttgcgcttcctgctcagtgggttggtgggg
attgtcctgtgtatcgcggtgagcgcctgggtggcgctgtacctggcgcgccgtcagttg
cgcggcattaccgggccgctgcgcagcctggccgatgtggcgcatgccgcgcgccgcgag
cgggccttcgacgtgcgggtaccgccggcgaagattgccgagctggataacctgggcaac
gacttcaatgccttgctcgatgagctggaagcctggcaaacccatttgcagagtgaaaac
gaaaccctggcccaccaggccagccacgacagcctgaccgggttgccgaaccgggcgttt
ttcgagggccggctgatccgcgcgctgcgcagcgccagcaagctcaacgaacgggtcgcg
gtgctgtttctcgacagcgaccgcttcaagggcatcaacgacaacttcggtcacgccgcc
ggcgacgcggtgctgatggcggtggcatcgcgggtgcgggcgcagttgcgcgaggaagac
ctggtggcgcgcctggggggcgacgagttcgccattttgctgaccccgctacatcgcatc
gaggacgccgagcgcatcgccgaaaaaatcatcgccagcatggaactgccgatcgccttg
ccaggcagtacttcggtgctgacgtcgctcagtatcgggattgccgtctaccctgatcat
ggcaccaccccgggtgctctgctcaacgccgccgatgcggcgatgtatcaggccaagcgt
gtctctcgaggcgggcaacacaccgcggggtcggagccccccgtcgttcacgttcaatcc
aggagctaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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