KEGG T04637: PcP3B5

Pseudomonas citronellolis: PcP3B5_12750

Entry

PcP3B5_12750      CDS       T04637

Symbol

recB

Name

(GenBank) RecBCD enzyme subunit RecB

K03582

exodeoxyribonuclease V beta subunit [EC:3.1.11.5]

Organism

pcq Pseudomonas citronellolis

Pathway

pcq03440

Homologous recombination

Brite

KEGG Orthology (KO) [BR:pcq00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    PcP3B5_12750 (recB)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pcq03400]
    PcP3B5_12750 (recB)
Enzymes [BR:pcq01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     PcP3B5_12750 (recB)
DNA repair and recombination proteins [BR:pcq03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     PcP3B5_12750 (recB)

SSDB

Motif

Pfam:

UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 AAA_25 AAA_30 AAA_11 AAA_12

Other DBs

NCBI-ProteinID:

AMO74751

Position

1371758..1375438

AA seq 1226 aa
MSRELRALEFPLHGSRLIEASAGTGKTFTIALLYLRLVLDHGGELAFGRPLSPPEILVVT
FTDAATQELRERIRARLGEAASCFAEPALQHDALLVELRASYPEQRWPGCARLLRLAAEW
MDEAAVSTIHSWCYRMLREHAFDSGSLFTQDLITDQSELLAEVVRDYWRRNFYPLPAPAA
KVVGDIYKGGPEALARLLQPLLAQQEAGFRYADQPLSAPGSLRELLEETGAFYARLDELE
QQARAAWAADAQGLRQLLIDLRPQLNGNSYRNKDDDAVFEGWLQALEAWSLGGVAPENLH
RFGQTRIKVKGKTPVPEHAALQAIDAWLEAAEQQPDIAPQLLLHALGEVSRALEAEKQRR
AELGFDDLLARLDRALAGPGGEHLAERIRLQFPVALIDEFQDTDPLQYRIFERIYRIADN
PRDCGLFMIGDPKQAIYAFRGADIHTYLRARAATAGRHYTLGTNYRSTLAVVEAVNHCFA
FAEGHERGAFRFAAQGDNPVPFQAVAAKGRDERLLIDGEEAAALTLWQLENDGQVVGSRL
YREQMAAGAASAIRHWLSLAQQGRAGLYQADGTGRALRPADIAILVRGRSEAEAVRAELA
ARRLASVYLSDRDSVFDSPEAGDLLHWLRACAEPGNDALLRSALATRTLGLGWQTLERLN
QDEQFWEGMLMRFRDYRSQWQQQGVLPMLRRLLADFELPARLLRRADGERSLTNLLHLAE
WLQREAAELDGEHALLRVLAEQLASPSSEEILRLESDADLIKVVTIHKSKGLEYPLVLLP
FICSWKELDGKSQTPPSFQGEDGKVIELARGKDLAEAAYRLANDERLGEDMRLLYVALTR
ARHALWLGVAPLVAGNAKNPELHKGAFGYLLGGGAAIALDGFAGCLQALGGGCPGIRIEP
VPAVDATAYDEARAGLLGQAREPQRRVAEKWWIASYSALATLDAEGDAPAPASEPISAEE
ATLREGDADSAAAELAQAAPAAGSLHAFPRGPNPGSFLHGLLEWAADEGFAAVAEQPEAL
RDLIARRCQLRGWEAWIEPLAQWLPAFLQAELAVPGAAPVQLAALASYQKEMEFWFAVKP
TDSTRLDAAVRAHVLPGEARPALQPTQLGGMLKGFIDLVFEHEGRYYVADYKSNWLGPDA
AAYTAPALRAAVLEHRYDLQYALYLFALHRLLKARLADYDYDRHVGGALYLFLRGGEHGV
FHECPPKALMEALEALFSQHAEEVPA

NT seq 3681 nt +upstreamnt +downstreamnt
atgagccgcgaactgcgcgccctggaattccccctgcacggcagccgcctgatcgaggcc
agcgccggcaccggcaagaccttcaccatcgccctgctgtacctgcgcctggtgctcgac
cacggcggcgaactggctttcggccggccgctgagcccgccggaaatcctcgtggtgacc
ttcaccgacgccgccacccaggaactgcgcgaacgcatccgcgcgcgcctgggcgaggcc
gccagctgcttcgccgagccggcgctgcagcacgacgcgctgctggtggagctgcgcgcc
agctacccggagcagcgctggcccggctgcgcgcgcctgctgcgcctggccgccgaatgg
atggacgaggccgccgtgtcgaccatccacagctggtgctaccgcatgctccgcgagcac
gccttcgacagcggcagcctgttcacccaggacctgatcaccgaccagagcgaactgctc
gccgaagtggtgcgcgactactggcggcgcaacttctacccgctgccggcgccggcggcg
aaggtggtcggcgacatctacaagggcggccccgaggccctggcgcgcctgctgcagccc
ttgctggcgcagcaggaggccggcttccgctatgccgaccagccgctgagcgcgcccggc
tcgctgcgcgagctgctggaggaaaccggcgccttctacgcgcgcctggacgaactggag
cagcaggcccgcgccgcctgggccgccgacgcccagggcctgcgccaactgctgatcgac
ctgcgcccgcagctcaacggcaacagctaccgcaacaaggacgacgacgccgtcttcgaa
ggctggctgcaggcgctggaagcctggagcctgggcggcgtggcgccggaaaacctccac
cgcttcggccagacgcggatcaaggtgaagggcaagacgccggtgcccgagcacgccgcg
ctccaggccatcgatgcctggctggaggccgccgagcagcagccggacatcgccccgcaa
ctgctgctgcacgccctgggcgaagtcagccgcgccctggaggcggagaagcagcgccgc
gccgaactgggcttcgacgacctgctggcgcgcctggaccgcgccctggccggccccggc
ggcgagcacctggccgagcgcatccgcctgcagttcccggtggcgctgatcgacgaattc
caggacaccgatccgctgcagtaccgcatcttcgagcgcatctaccgcatcgccgacaac
cctagggattgcggcctgttcatgatcggcgaccccaagcaggcgatctacgccttccgc
ggcgccgacatccacacctacctgcgcgcccgcgccgccaccgccgggcgccactacacc
ctgggcaccaactaccgctcgaccctcgccgtggtggaggcggtgaaccactgcttcgct
ttcgccgagggccacgaacgcggcgccttccgcttcgccgcgcagggcgacaacccggtg
ccgttccaggcagtggccgccaagggccgcgacgagcgcctgctgatcgacggcgaggaa
gccgcggcgctgaccctctggcagctggagaacgacggccaggtggtcggcagccggctc
taccgcgagcagatggccgccggcgccgccagcgccatccgccactggctgagcctggcc
cagcagggccgcgccgggctgtaccaggccgatggcacgggccgcgcgctgcgtccggcg
gacatcgccatcctggtgcgcgggcgcagcgaggccgaggcggtgcgcgcggaacttgcg
gcgcggcgcctggccagcgtctacctgtccgaccgcgactcggtgttcgacagccccgag
gccggcgacctgctgcactggctgcgcgcctgcgccgagccgggcaacgacgccctgctg
cgcagcgccctggccacccgcaccctgggcctgggctggcagaccctggagcggctgaac
caggacgaacagttctgggaaggcatgctcatgcgcttccgcgactaccgcagccagtgg
cagcaacagggcgtgctgcccatgctgcggcggctgctggccgacttcgaactgccggcg
cggctgctgcggcgggccgacggcgagcgcagcctgaccaacctgctgcacctggccgaa
tggctgcagcgcgaggccgccgagctggacggcgagcacgccctgctgcgggtgctggcc
gagcagctggccagcccgtcgagcgaggaaatcctccgtctggaaagcgacgccgacctg
atcaaggtggtgaccatccacaagtccaagggcctggaatacccgttggtgctgctgccg
ttcatctgcagctggaaggagctggacggcaagagccagacgccgcccagcttccagggc
gaggacggcaaggtgatcgaactggcgcgcggcaaggacctggccgaggcggcctaccgc
ctggccaacgacgaacgcctaggcgaggacatgcgcctgctctacgtggccctgacccgc
gcccgccacgccctgtggctgggcgtggcgccgctggtggcgggcaacgcgaagaacccc
gagctgcacaagggcgccttcggctacctgctcggcggtggcgcggccatcgccctggac
ggcttcgccggctgcctgcaggccctgggcggcggctgccccggcatccgcatcgagccc
gtgccggcggtggacgccacggcctacgacgaggcccgcgccggcctgctcggccaggcc
cgcgagccgcagcggcgggtggcggagaaatggtggatcgccagctattccgcgctggcc
accctggacgccgaaggcgacgccccggcaccggccagcgaacccatcagcgccgaggaa
gccaccctgcgcgaaggcgacgccgacagcgccgcggccgaactggcccaggccgcgccg
gccgccggcagcctgcacgccttcccgcgcgggcccaaccccggcagcttcctccacggc
ctgctggaatgggccgccgacgagggcttcgccgccgtggcggagcaacccgaggcgctg
cgcgacctgatcgcccggcgctgccagctgcgcggctgggaagcctggatcgagcccctg
gcgcagtggctgccggccttcctccaggccgaactggcggtgcccggcgcggcgccggtg
caactggcggcgctggccagctaccagaaggaaatggagttctggttcgccgtgaaaccc
accgacagcacccgcctcgacgccgcagtgcgcgcccacgtgctgcccggcgaggcgcgc
ccggcgctgcagccgacgcagctgggcggcatgctcaagggcttcatcgacctggtcttc
gaacacgaggggcgctactacgtggccgactacaaatccaactggctcggccccgacgcc
gccgcctacaccgcgccggccctgcgcgcggcggtgctggagcaccgctacgacctgcag
tacgcgctctacctgttcgccctgcaccgcctgctcaaggcgcgcctggcggactacgac
tatgaccgccacgtgggcggcgcgctctacctgttcctgcgcggcggcgagcacggcgtg
ttccacgaatgcccgccgaaggcgctgatggaggcgctggaagcgctgttcagccagcac
gccgaggaggtgccggcatga

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

Download RDF

DBGET integrated database retrieval system