KEGG   Pectobacterium carotovorum subsp. carotovorum PC1: PC1_0914Help
Entry
PC1_0914          CDS       T00934                                 

Definition
(GenBank) exodeoxyribonuclease V, beta subunit
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
pct  Pectobacterium carotovorum subsp. carotovorum PC1
Pathway
pct03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pct00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    PC1_0914
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pct03400]
    PC1_0914
Enzymes [BR:pct01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     PC1_0914
DNA repair and recombination proteins [BR:pct03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     PC1_0914
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 AAA_30 ResIII AAA_11 HAD_SAK_2
Motif
Other DBs
NCBI-ProteinID: ACT11964
UniProt: C6DAF6
Position
1057054..1060638
Genome map
AA seq 1194 aa AA seqDB search
MNSAAPQSLDVMTLPLLGERLIEASAGTGKTYTLAALYLRLLLGLGKQAAYPRPLLVEEI
LVVTFTEAATEELRERIRARIHALRIACLRKSAQGEESEKPKDASLTQLLAEISDHRDAA
DVLLAAERQMDEAAIYTIHGFCQRMLSTNAFESGVLFEQVLIEDEQPLRRQACADFWRRY
CYPLPVEVARIVGLEWKGPENLLADLAPYLHGEAPAFRLMPEEDETLQSRHDKIVATIDA
YKQRWLASAADLEALISASGVDKRSYSSKHLPNWLQKVTLWAEQQPTLDYQLPKDLVRFS
QQALIEKTKKGEPPVHALFEETDRLLATPLSLRDLVIVRALSAIRESVSEEKRQRAELGF
DDLLSRLDVALQQPGGERLASAIRERYPVAMIDEFQDTDPQQYRIFRTLYVGQPQCGLLL
IGDPKQAIYAFRGADIFTYMHARGEVAAHYTLGTNWRSSHQMVHGVNRLFERLEYPFIFQ
NIPFLPVKPAESKRGLVFEVAGKPQPALQFWLTGSEPIGIGDYQQRMARQCAAQIRDWLA
ASQRNEAWLVTDDSQRLVKASDMSVLVRSRREASLIRDALSRLSIPSVYLSNRDSVFSTP
EASDMLWLLQAVLAPEQERTLRSAMATALMGLDAGQVDALGQSETAWDALVDEFAGYRAL
WRQKGILPMLRALMSRHQLAENLLASAEGERRLTDILHIGELLQDASATLDSEHALVRWL
SQQIVQPNPQAENQQLRLESDRHLVQIVTIHKSKGLEYPLVWLPFISHFRVQDQGIYHDR
ESYQAVLDLQNHEESQTLAEEERLAEDLRLLYVALTRSIYHCSVGVAPIQRSRKKDGSSD
MHQSALGYLLQRGKEAEAATLVSELEGMVGDGVALTPLQATEEQRWQPDRPELAELRARH
IERQLRDGWRVTSYSGLQQHGSAGAQDLVPRLDIEAIGERQEGDETQLTPHTFPRGASPG
TFLHSLFETLDFTQPVDDGWLAEQLQLQGFEAHWQPVLKAWMNTLLQTPLNEQGITLSAL
DNADKQAELQFYIPIEAPIQAAQLDRLAKHHDPLSARCPALSFQQVKGMLKGFIDLVFRW
EGRYYLLDYKSNWLGPDASAYTQTAMMQSMAEHRYDLQYQLYTLALHRYLRHRIADYDYE
RHFGGVFYLFLRGVEESHPGNGIFACRPSAEFVFGLDTLFKGKTPDDADTGIPS
NT seq 3585 nt NT seq  +upstreamnt  +downstreamnt
atgaacagcgccgcgccgcaatcattagacgtcatgacgttgccgctcctgggggagcgg
ctgattgaggcgtcggccggaacagggaaaacctatacgctggcggcgctctacctgcgc
ctgctactggggctgggtaagcaagccgcttacccacgtccgctgctggtcgaggaaatt
ctggttgtgacctttacggaggcggcgaccgaagaactgcgggaacgtattcgagccaga
atccacgccttacgcatcgcctgcctgcgtaaaagtgcgcagggtgaagagtcggagaag
cctaaagatgcttcgctaacacaactgctggcggagatttctgaccatcgcgatgcggcc
gatgtcttgctggctgccgaacgacaaatggacgaggcggcgatctacacgatccacggt
ttctgccagcgtatgctcagtaccaatgcgtttgagtctggtgtgctttttgaacaggtg
ctgatagaagatgagcagccgctgcgccgtcaggcctgcgccgacttttggcgtcgttat
tgctatccgttgccggtagaggtcgcacgtattgtcggtctggagtggaaagggccggaa
aacctgctggccgatctggctccctatctgcacggtgaagcgcctgcatttcgcttgatg
ccagaagaggacgaaacgctgcagagtcggcacgataagatcgtggcgacgatcgacgcg
tataaacaacgctggctggcgtcagcagcggatctggaagcgttgattagtgcttctggt
gtcgataaacgcagctacagcagtaagcatctacccaactggctacagaaagttacgctg
tgggcagagcagcagccgacgctggattaccaactgccgaaggatctggtacggttttcc
cagcaagcgctcattgaaaagacgaagaaaggggaaccgcccgttcatgccctctttgag
gaaacagaccggctacttgccacaccgctgtcgctgcgtgatttagtgattgtgcgtgca
ctgtcggcaatccgggagtcagtgagtgaggaaaagcggcagcgtgcagagctagggttt
gacgatctgctgagccgtctggatgttgcgttgcaacagccgggtggggaacggcttgcc
agcgccattcgcgaacgctatccggtggcgatgatcgatgaatttcaggataccgacccc
cagcaataccgtatttttcggacgctgtatgttgggcagccgcagtgtgggctgctgttg
atcggtgaccctaagcaggctatttatgcgtttcgcggtgcggatatttttacctatatg
cacgcgcgcggagaagtggctgcacattatacgctgggcacgaactggcgatcgtcacac
cagatggtacatggcgttaatcgtctatttgaacgcctcgaatatccttttatttttcaa
aacatcccgttcctaccggtcaagcctgccgaatctaagcgcggtttggtgtttgaggtt
gccgggaagccgcagcctgcactgcaattctggctaaccggttcagaaccgattggcata
ggggattaccagcagcggatggcgcgccagtgtgcggcgcagattcgtgactggctcgcc
gccagccagcgtaatgaagcctggttggttaccgatgattcccagcgtttggtcaaggca
tccgacatgagcgtgctggtgcgtagccgacgtgaagcctcgctgattcgtgatgcgctg
agccgtttgtctataccttcggtgtatctgtccaatcgcgacagcgtattcagtacgccg
gaagccagcgatatgttgtggttgttgcaggcggtgctggctccagagcaggagcgcacg
ttacgcagcgcgatggcgacggctctgatggggttggatgctgggcaggttgatgcatta
gggcaaagtgaaaccgcgtgggatgcgctggtagatgagtttgcgggttatcgcgcgttg
tggcgtcagaaaggcatactgcccatgctgcgcgcactgatgagtcgccatcaattggcg
gagaacctgctggcgagcgcggaaggggaacgccgtctcaccgatattctgcatatcggt
gagttgttgcaggatgcctcggcaacgctcgacagtgaacacgcgctggtgcgctggcta
tcgcaacagattgttcagccgaatccgcaggcagagaaccagcaactgcgtctggaaagc
gatcgccatctggtgcagatcgtgacgatccataaatcgaaagggctagaatatccgctg
gtgtggctgcctttcattagccacttccgcgtgcaggatcaggggatttatcacgatcgc
gagagctatcaggccgtgttggatctgcaaaatcatgaagaaagccagacgctggcggaa
gaagagcggctggcggaagatttacgtttgttatatgtcgcgctgacccgttctatttat
cactgtagcgtcggcgtcgcaccgattcagcggtcacgtaagaaagacggcagcagcgat
atgcaccagagcgcgctgggttatttactccagcgtggtaaagaagctgaggctgccacg
ttggttagcgagctggaaggcatggtcggtgacggtgtcgcattaacaccgttacaggca
acggaagaacagcgctggcagccggatagaccagaattggcggagctacgggctcgccac
attgaacgtcagctacgcgacggctggcgagtcaccagctattcagggcttcagcaacat
ggttccgcaggcgcgcaggatctggttccgcgtctggatattgaggcgataggcgagcgt
caggaaggggatgaaactcaactgacgccgcatacgttcccgcgcggcgcgagtccgggg
acgtttttacatagcctgtttgaaacgctggatttcactcaacccgttgatgatggctgg
ttggccgagcagttgcagctacagggatttgaagcccactggcaaccagtgttgaaggcg
tggatgaatacgcttttgcagacgccgcttaacgaacaggggattacgctatcggcgctg
gataatgcagataagcaggctgaattgcagttctatatcccgatcgaggcaccgatacag
gcggcgcagttggatcggctggcaaagcatcacgatccgctatctgctcgctgtccggca
ctctcttttcagcaggtgaaaggtatgctgaaagggtttatcgatctggtgttccgctgg
gaagggcgctattacctgctggactacaaatccaattggcttggccctgatgccagtgcg
tacacccagacagccatgatgcagtcgatggccgaacatcgctatgacctgcaatatcag
ctctacacgctggccttgcatcgctatctccgtcaccgcattgcggattacgactatgag
cgccattttggcggcgtgttttatctgtttttacgcggcgttgaggaatctcaccccggc
aatggcatctttgcttgtcgtccctccgctgaatttgttttcgggcttgatacgctcttc
aagggaaaaacgcctgacgatgctgatacaggaattccctcatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (19)   

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