KEGG   Pectobacterium carotovorum subsp. carotovorum PC1: PC1_1006
Entry
PC1_1006          CDS       T00934                                 
Name
(GenBank) SMC domain protein
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
pct  Pectobacterium carotovorum subsp. carotovorum PC1
Brite
KEGG Orthology (KO) [BR:pct00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pct03400]
    PC1_1006
DNA repair and recombination proteins [BR:pct03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     PC1_1006
    Archaeal homologous recombinant proteins
     PC1_1006
SSDB
Motif
Pfam: AAA_23 SbcC_Walker_B AAA_29 ABC_tran AAA_21 nSTAND3 cobW SMC_N NTPase_1 AAA_22 MobB AAA_25
Other DBs
NCBI-ProteinID: ACT12055
UniProt: C6DB13
Position
complement(1173525..1177208)
AA seq 1227 aa
MKILSLRLKNLNALKGEWKIDFTQEPFSSNGLFAITGPTGAGKTTLLDAICLALYHETPR
LGQLSEKHNDLMTHNTSECLAEVEFEVKGVGYRAFWSQRRARNSPDGNLQTPKAELALIE
GGRILCEKITDKKNRVEQITGLDFGRFTRSMMLSQGQFAAFLNAQPKDRADLLEELTGTD
IYGLISERVYDKHRQALEALNMLQTRASSIQLLTDEQRQQVEVQLAERIQQEQQGNVERE
QALTTLRWFEQLTQQQTSVTHTQAQHTSAESAIQQARPQLDKLANSEPAEKLRPLHQEKE
RYRQASLTLAQQIEQLNGKLAAEQLALRTLHQQEEKAEQDVSEHKQIRQQQEQLINEQVV
PLDHRIATLEQQKNQQQNELAKTQARLHADDAKQTLVAAEQQQAKRQLEQIQSYRQQHAH
HQQWGELLPLWRTQFRQLRQLQDEHQKLNQKQAQHTAESTARQQEADKLAAQQREQQKVV
DAVRQQFTQHDETRQHQDTHQPLSTLHQRFNQLMDQQATCRQLATVSDQYQRLQVRKQQH
LAKLAEAQGHIDQSEILQKQQQSEHQQRSERLADLETIYRQEVHIVKLEAERQRLQAGEA
CPLCGSTEHPAIERYQALQPSETQRRLTALQQDVNQLTIALANTTAELNARLQQREQLQS
ELAQCDSEHQALLQHWQSVSERLQVTYSLEQQDEIAVWLTLREAEEQAIRQQIAAREQSQ
KLWQESKDLLTAAEALLRDLEQKIALNAQQQTSLDVTQEETTQSLQNAHQQITQQTQDIT
QTLATVGLLLPDTDTQDGWLAQRDSEWQNWKAKEQEQSRLTPLLATLESDLQHLRHSVSE
ATQHIQTQQQQLAQHLAQLNTSQQERKVLFGDKQITDVREQLQRTSQQRDDALRLAQSAR
QQTETALSRLTGELASTQQQYEQSTCQHESATERFTLALQQSTFVDETAFLHALLDEQER
QTLQEFKETLHQRLQQAATLRQQAEQALLEHQQKRPASLTEDATQEAIQQQLAALDDTLK
TNLRQQGEFQRQLSDDKQQRQNQQNLLNEIAQSQQKNDDWETLNSLIGSSKGDKFRKFAQ
GLTLDHLVYLANLQLSRLHDRYQLKRKPGGDLELLVMDTWQADAERDTKTLSGGESFLVS
LSLALALSDLVSHKASIDSLFLDEGFGTLDAETLDIALDALDNLNASGKTIGVISHVEAM
KERIPVQIKVQKVNGLGVSRLAPQYAV
NT seq 3684 nt   +upstreamnt  +downstreamnt
atgaaaatcctcagtctgcgcttaaagaacctcaacgcgctgaaaggcgaatggaagatc
gacttcacgcaggagcccttttccagcaacggcttatttgcgattaccggccccaccggc
gcgggaaaaaccacgctgctggatgccatatgtctggcgctttaccacgaaacaccgcga
ttgggtcagctttctgaaaagcataatgacctgatgacgcacaacacctccgaatgtctt
gcagaagttgaattcgaagtgaaaggcgtcggataccgcgccttctggagccaacgtcgg
gctaggaactcaccggatggtaatttacagacaccaaaggccgaactcgccctcattgaa
ggcggtagaattctgtgtgaaaaaatcaccgataaaaaaaatagagtagaacaaatcacc
ggactggattttggccgttttacacgatccatgatgttgtcgcaggggcaatttgctgcg
tttctcaacgcacaacccaaagacagagcggacctactggaagagctgaccggcacagat
atttacggactgatctccgaacgcgtctatgacaagcacaggcaggcgctcgaagcactg
aacatgctacagacgcgtgcatccagcattcagctgttgaccgatgagcagcgtcagcag
gtggaagtacagcttgccgaacggatccagcaggaacaacagggcaacgttgagcgtgag
caagcactgactacgctacgctggtttgagcaactgacgcagcagcaaacgtcggtaact
catacgcaggcgcaacacacgagcgccgaatccgccattcagcaggccaggccgcagctc
gataaattagccaatagcgaaccggcagaaaaactgaggccgctacatcaggaaaaagag
cgctatcggcaggcgtccctgaccctcgcccagcagattgaacaactcaacggcaagctg
gccgcagaacagctggcgttaagaacgttacatcagcaagaagaaaaagcggaacaggac
gttagtgagcacaagcagatacgacaacagcaagagcaactgatcaacgagcaggttgta
ccacttgaccatcgcattgctactctggaacagcaaaaaaaccagcagcagaacgaactg
gcaaaaacgcaggctcgcctgcacgccgacgacgctaaacaaacactggtcgcagcggaa
caacagcaggctaaacggcagcttgaacagatccagtcttaccgccagcaacacgcacat
catcagcagtggggagagctgttgcctctgtggcgcacccagtttcggcagttgcgccag
ttacaggacgagcaccagaagctgaaccagaaacaggcacagcatacggcagagtcgacg
gcacggcagcaagaagccgacaagctggcggcacagcagcgtgaacaacaaaaagtcgtt
gatgctgtacgccagcagttcacgcaacacgatgaaacgcggcaacatcaggacacgcat
cagccactttccactctgcaccagcgctttaatcagctcatggatcagcaggcgacatgt
cgacaactcgccaccgtcagcgaccaataccagcgccttcaggtgcgcaagcagcaacat
ctcgccaaactcgctgaggcacaaggccatatcgaccagtcagaaatattgcagaaacag
cagcagtctgaacatcagcaacgcagcgagcgtctggccgatttggaaacgatatatcgg
caggaagtgcatatcgttaagctggaagccgaacggcaacggctacaggccggagaggcg
tgcccgctgtgtggctcaaccgagcaccccgctatcgagcgctatcaggcactacaaccg
tctgaaacccaacggcgtctgacggcgttacagcaggatgtaaaccagttaaccatcgcg
ctggcgaataccactgctgaactgaacgcacgcttacagcagcgggaacagctgcaatcg
gaacttgctcaatgtgatagcgaacatcaggctctgctgcaacactggcaaagtgtcagt
gagcgcttacaagttacctactcgctggaacagcaggacgagatagccgtctggcttaca
ctgcgtgaagccgaagaacaggccattcgacagcagattgccgcgcgcgagcagtcgcaa
aaactgtggcaggaaagtaaggatttactgactgccgcagaagcattattacgggatctc
gaacagaaaatcgcgctgaatgcccagcaacaaacttcgctagacgttacgcaggaagaa
acgacgcagtcgctgcaaaacgcacaccaacagatcacgcaacagactcaggacatcacg
caaacgctggcaacggtggggcttcttttgccagacactgacacacaggatggctggctg
gctcagcgtgacagcgaatggcaaaactggaaagccaaagagcaggagcagtctcgctta
acccctctgttagccacgctggaaagcgatcttcaacatctgcgtcacagcgtaagcgag
gcaacacagcacatccaaacgcagcaacagcagttggcacagcacctcgcgcagctcaac
acaagccaacaagagcgaaaggtgctatttggggacaagcaaatcaccgatgtgcgcgaa
cagctacaacgaaccagccagcagcgtgatgatgcactcaggctcgcgcaatcagcccgt
cagcaaaccgaaacggcgttaagccgtctgacgggagagctggctagcacgcagcagcaa
tatgaacagagcacgtgccagcatgagagtgcaacagaacgctttactctggcgttgcag
caaagcactttcgttgatgaaaccgcctttctccatgcactgcttgatgagcaggaacgt
caaacgttgcaggaattcaaggaaacgctgcatcagcgcttgcagcaagcggcgacactg
cgccagcaggctgaacaggcgctacttgaacatcaacaaaaacggccagcatccctgacg
gaagacgctacgcaagaggcgatacagcagcagttggccgcgctggatgacacgctgaaa
actaacttgcggcagcagggggaattccagcgtcagttatctgacgacaaacaacagcgc
cagaaccagcagaatttacttaatgagattgcccaaagccagcaaaagaatgacgactgg
gagacgttaaactcgctgatcggctccagtaaaggggataaattccgcaaatttgctcag
gggctgaccttggatcatctggtctatctcgccaatctccagctttcacgcctgcacgat
cgctatcagctcaaacgtaagcccggtggcgatctggaacttctggtgatggatacctgg
caggcggacgccgagcgcgacacaaaaacgctatccggcggcgaaagttttctggtcagt
ctgtcattggcgctggcgctgtccgacctggtcagccataaagccagtatcgactcgctg
tttctggatgaaggctttggcacgctggatgccgagacgctggatatcgcactggatgcg
ctggataacctgaacgcctcgggtaaaaccatcggcgtcattagccatgttgaagccatg
aaagagcggattccggtacagatcaaagtgcagaaggttaacgggctcggcgtcagcagg
ctggcgccgcagtacgccgtttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (19)   

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