KEGG   Pectobacterium carotovorum subsp. carotovorum PC1: PC1_4027
Entry
PC1_4027          CDS       T00934                                 
Name
(GenBank) type VI secretion system effector, Hcp1 family
  KO
K06887  uncharacterized protein
Organism
pct  Pectobacterium carotovorum subsp. carotovorum PC1
Brite
KEGG Orthology (KO) [BR:pct00001]
 09190 Not Included in Pathway or Brite
  09194 Poorly characterized
   99997 Function unknown
    PC1_4027
SSDB
Motif
Pfam: T6SS_HCP
Other DBs
NCBI-ProteinID: ACT15042
UniProt: C6DHG9
Position
complement(4547225..4547704)
AA seq 159 aa
MSSIIYLELTGDKQGLISSGCSTLQSIGNRSQIGHEDQIQVLSLNHSMSHADNLSCHPVE
IIKLIDKSSPLLGVSTSSNEKLSANFFLYRINAAGQLELFYVIKLTDARIVDISCSYPHS
INDNDVMPYEKVLLKYNSISWEHKVAGTSGYSIWNDSGI
NT seq 480 nt   +upstreamnt  +downstreamnt
atgtcgagtattatctatttagagttgacgggtgataagcaaggattaatttcttctggc
tgttcaacattacagtcaattggtaatagaagccaaattggtcatgaagatcagattcag
gtgttaagtttaaatcactcaatgagtcatgctgataatctatcttgtcatcccgttgaa
ataattaaacttatcgataaatcgtcaccattgcttggtgtttctacctcttccaatgaa
aagctaagtgcaaatttctttttgtataggataaatgccgctgggcaattagagttgttt
tatgtcattaaattaacagatgcccgcattgttgacatttcttgtagttatccgcattcg
attaatgacaatgacgtaatgccatatgagaaagttttattaaagtataactccatatca
tgggaacacaaagttgcgggaacatcaggttatagtatctggaatgatagtggtatttag

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (7)   

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