KEGG   Pectobacterium odoriferum: BCS7_00020
Entry
BCS7_00020        CDS       T03424                                 
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
pcv  Pectobacterium odoriferum
Brite
KEGG Orthology (KO) [BR:pcv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pcv03032]
    BCS7_00020 (gyrB)
   03400 DNA repair and recombination proteins [BR:pcv03400]
    BCS7_00020 (gyrB)
Enzymes [BR:pcv01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     BCS7_00020 (gyrB)
DNA replication proteins [BR:pcv03032]
 Prokaryotic type
  DNA Topoisomerases
   BCS7_00020 (gyrB)
DNA repair and recombination proteins [BR:pcv03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      BCS7_00020 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB GyrB_insert DNA_gyraseB_C Toprim GyrB_hook HATPase_c HATPase_c_3 DUF6865
Other DBs
NCBI-ProteinID: AIU86758
UniProt: A0A094RYG7
Position
3806..6223
AA seq 805 aa
MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGYCKDII
ITIHADNSVSVQDDGRGIPTGIHEEEGISAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSEKLKLVIHRDGKLHEQTYKHGVAQAPLAVTGETNRTGTTVRFWPSHETFTNVV
EFEYEILAKRLRELSFLNSGVSIRLIDEREKDKADHYHYDGGIKAFVDYLNRNKTPIHPN
VFYFSTVKDDIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNTYMDK
EGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKTAVESLMNEKLVD
YLMENPSDAKIVVGKIIDAARAREAARKARDMTRRKGALDLAGLPGKLADCQERDPALSE
LYLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIG
RDEYNPDKLRYHNIIIMTDADVDGSHIRTLLLTFFYRQLPEIVERGHVYIAQPPLYKVKK
GKQEQYIKDDEAMDQYQIALALDGATLHTNAQAPALAGEPLEKLVSEHYAVQKMIGRMER
RFPRAFLNRLIYQPTLAEADLGEREKVQAWAESLVSSLNANEVHGSTYSFVINHDEERSV
FEPALRVRTHGVDTDYPLGAGFVAGSEYRKLNQLGEKLRGLIEEDAYIERGERRQPVASF
EQALEWLVKESRRGLTVQRYKGLGEMNPDQLWETTMDPTSRRMLRVTVKDAIAADELFTT
LMGDAVEPRRAFIEENALKAMNIDI
NT seq 2418 nt   +upstreamnt  +downstreamnt
atgtcgaattcttatgactcctcaagtatcaaggtattgaaagggctggatgcggtacgt
aaacgcccaggtatgtatatcggcgatacggacgacggtaccggcctgcatcatatggta
ttcgaggttgtggacaacgctatcgacgaggcactcgctggctattgtaaagacattatc
atcaccatccatgctgataactcggtatcggtgcaggatgatggccgtggtattccaact
ggtattcatgaagaagaagggatctccgcggctgaagtcatcatgaccgtgctgcacgcg
ggcggtaagttcgatgataactcgtataaagtctccggcggcctgcacggcgtaggggtt
tccgtggttaacgccctgtcggaaaaactgaaactggttatccaccgcgacgggaaactt
cacgagcaaacctataaacacggcgtggcgcaggctccgctggcggttacgggtgaaacc
aacagaaccggtacgacggtgcgcttctggccgagccatgagacgttcaccaacgtggtg
gagttcgagtatgaaatcctggctaagcgtctgcgtgagctgtcgttcctgaactccggt
gtctccatccgcttgatcgacgagcgtgagaaagataaagccgatcattaccattatgat
ggcggcattaaggcgtttgttgattacctgaaccgtaacaagacgccaattcacccgaac
gtgttttatttctcgacggtgaaagatgacatcggcgtggaagtggcactgcagtggaac
gatggtttccaggaaaacatttactgctttaccaacaacattccacagcgcgacggtggt
acgcacctggccggtttccgtgccgcgatgacccgtacgctgaatacctacatggataaa
gaaggctacagcaagaaagccaaagtcagcgctaccggtgacgatgcgcgtgaagggctg
attgccgtcgtttccgtgaaagtgccggatccaaaattctcctcgcagaccaaagataag
ctggtttcttccgaagtgaaaacggcggttgaatcgctgatgaatgagaaactggtggat
tatctgatggaaaatccatcggatgccaaaatcgtcgtcggtaagattattgatgccgca
cgtgcccgtgaagcggcgcgtaaagcgcgtgatatgacgcgtcgtaaaggtgcgctcgat
ctggctggcctgccgggcaaactggcggactgtcaggaacgtgaccctgcgctgtctgaa
ctgtacctggtggaaggggactcagcgggcggctctgccaagcaggggcgtaaccgtaag
aaccaggcgattctgccgctgaagggtaaaattctgaacgttgagaaagcccgttttgac
aagatgctttcctcacaggaggtcgcgacgctgatcaccgcgctgggctgcggcattggc
cgcgatgaatacaacccggacaaactgcgctaccacaacatcatcatcatgaccgatgct
gacgtggatggttcacacatccgtaccctgctgttgaccttcttctatcgtcaattgcct
gaaatcgttgaacgtggccacgtgtatattgcgcagccgccactgtacaaggtgaaaaaa
ggcaagcaggaacagtacatcaaagatgatgaagcgatggaccagtaccagatcgcactg
gcgctggacggtgcaacgctgcataccaatgcacaggctcctgcgctggcgggtgaaccg
ctggagaaactggtttctgaacattacgctgtacagaagatgattggccgtatggaacgt
cgtttcccgcgagcgtttttgaaccgcctgatttatcaaccaacattggctgaagccgat
ttgggcgagcgtgaaaaggtgcaggcgtgggcggaatcgctggttagcagtctgaacgca
aacgaagtgcacggtagcacatacagctttgttattaatcacgatgaagagcgtagcgta
tttgaacccgcgctgcgcgtgcgtacgcacggtgtggataccgattatccgctgggcgca
ggctttgttgctggtagcgaataccgcaagttgaatcagttgggtgaaaaactgcgtggc
ttgattgaagaagatgcgtacatcgaacgtggtgaacgccgtcagccggttgccagcttt
gaacaggcgctggagtggttggtgaaagagtcacgccgtggtctgaccgtacagcgttat
aaaggtctgggtgaaatgaacccggatcagctgtgggaaaccacgatggatccgaccagc
cgccgcatgctgcgcgtgacggtgaaagacgcgattgcggccgatgagctgttcacgacc
ctgatgggtgatgccgttgaaccgcgtcgtgcgtttatcgaagagaacgccctgaaggcg
atgaatatcgatatctga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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