KEGG   Phascolarctos cinereus (koala): 110192401
Entry
110192401         CDS       T05867                                 
Symbol
SF3B3
Name
(RefSeq) splicing factor 3B subunit 3
  KO
K12830  splicing factor 3B subunit 3
Organism
pcw  Phascolarctos cinereus (koala)
Pathway
pcw03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pcw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110192401 (SF3B3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pcw03021]
    110192401 (SF3B3)
   03041 Spliceosome [BR:pcw03041]
    110192401 (SF3B3)
   03036 Chromosome and associated proteins [BR:pcw03036]
    110192401 (SF3B3)
Transcription machinery [BR:pcw03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     110192401 (SF3B3)
Spliceosome [BR:pcw03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    110192401 (SF3B3)
 Complex B
    110192401 (SF3B3)
 Complex C
   U2 SnRNP specific factors
    110192401 (SF3B3)
Chromosome and associated proteins [BR:pcw03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    STAGA complex
     110192401 (SF3B3)
    TFTC complex
     110192401 (SF3B3)
SSDB
Motif
Pfam: MMS1_N CPSF_A
Other DBs
NCBI-GeneID: 110192401
NCBI-ProteinID: XP_020819191
UniProt: A0A6P5IA96
Position
Unknown
AA seq 1217 aa
MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGAEKQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVVRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG
DDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNSGEKLEFLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRT
PPEVSKKLEDIRTRYAF
NT seq 3654 nt   +upstreamnt  +downstreamnt
atgttcctgtacaacttgaccttgcagcgagccactggtatcagctttgccattcatggc
aacttctcagggaccaaacaacaagagattgttgtgtctcgagggaagattttggagctg
ctccggcctgaccccaacactgggaaggtgcacacgctattgactgtggaagtgtttggt
gttatcagatccctcatggccttcaggttgacaggtggtacaaaagattacattgtcgtt
ggcagtgactcaggccgaattgtcatcctggagtatcagccatccaagaacatgtttgag
aagatccatcaggaaacttttggcaagagtgggtgccgccgaattgtacctggacaattc
ttagctgttgatcccaaaggcagagctgtcatgattagtgccattgaaaagcagaaattg
gtttacattcttaacagagatgctgctgcccggcttaccatttcctcccctttggaagcc
cacaaggccaatactttggtttatcatgtggttggagtagatgttggatttgaaaatccc
atgtttgcttgtctggagatggattatgaggaagcagacaatgatccaacgggagaagcg
gcagccaatacccagcaaaccctcactttctatgagttagatctagggctaaaccacgtg
gtgcgaaaatacagcgagcccttggaggagcacggcaacttcctcatcacagtgcctgga
ggctcagatggcccaagtggtgtattgatctgctctgaaaactatatcacctataagaac
tttggtgatcaacctgatatcagatgtcccattcctaggaggcggaatgacttggatgac
cctgagagaggaatgatttttgtctgctctgccacccataagaccaagtctatgttcttc
tttttggcacaaactgagcaaggagacattttcaaaatcactttggagacagatgaagac
atggttactgagatccgactgaagtattttgatactgtccctgtggctgctgctatgtgc
gtgctcaaaacaggcttcctctttgtggcatccgaatttggaaatcattacctgtatcaa
attgctcatcttggcgatgatgatgaagagcccgagttctcctcggccatgcccctggaa
gaaggagatacgttcttcttccagccccggcctctcaagaacttagtgttggtggatgag
ctggatagtctctcccctattctcttttgtcagattgctgatcttgccaatgaagacacc
ccacagctgtatgtagcttgtggcaggggcccacgatcttctctaagggttttaagacat
ggactagaggtgtcagaaatggctgtctctgagctgcctggtaaccccaatgctgtctgg
actgtccggcgtcacattgaagatgaatttgatgcctatatcatcgtgtctttcgtgaat
gccaccctggtactttctattggagagactgtagaagaagtgacagattctggcttcctg
ggtaccactccaaccttgtcctgttccttgttaggagatgatgctttggtgcaggtatat
ccagatggcatccggcacatccgagcagataagagagtaaatgagtggaagaccccggga
aagaaaactattgtgaagtgtgcagtaaaccagcggcaggtggtgatcgcactgacagga
ggagagctagtctactttgagatggatccttcaggacagctgaatgagtacactgaacga
aaggagatgtctgcagacgtggtatgcatgagtttggccaacgtgcctcctggggagcaa
cgctctcgtttcctggctgtggggctggtagacaacactgttcgaatcatctctttggac
ccttcggactgcctccagccactgagcatgcaggccctcccagcccaaccagagtcgctg
tgtattgttgagatgggcggggccgagaagcaagatgagctaggggaaagggggtccatt
ggcttcctctatctaaacatcgggcttcagaatggtgtgctgttaaggactgtcctagac
cctgtcactggtgatctgtctgacacccgtacgagatacttgggctctcgccccgtgaag
cttttccgagtccggatgcagggccaggaagcggttttggctatgtcaagtcgctcgtgg
ctgagctattcttaccagtcccgctttcatctgacgcctctgtcctatgagaccctggaa
tttgcatctgggtttgcatctgagcagtgtcctgagggcattgtggccatctccaccaac
actttaaggattttggctttggagaagctcggtgctgtcttcaaccaggtagcatttccc
ctgcagtacactccaaggaagtttgtcatccaccctgagagcaacaaccttatcatcatt
gagaccgatcacaacgcctatactgaggccacaaaagcacagaggaagcagcagatggca
gaggaaatggtagaagcagcaggggaagatgagagagagttggcagctgagatggctgct
gccttcctgaatgaaaatctcccagaatccatctttggagcccccaaagcaggcaatgga
cagtgggcttctgtggtccgggtaatgaatcccatacaaggaaacacactggatcttgtc
cagctggaacagaatgaggctgcttttagtgtggcagtatgccgattctcaaatactggt
gatgattggtatgtgctggtgggtgtagccaaagacctcattctgaatccccgctcggtg
gctggaggctttgtctatacctataaactcgtgaacagtggagagaaactggagtttttg
cacaagacaccagtggaagaggtccctgcagccattgccccattccagggcagggtattg
attggtgtggggaagctgttgcgtgtctatgacctcgggaaaaagaagttgctccgaaaa
tgtgagaataagcacattgcaaactacatctctggcattcagacaattggacaccgggtc
atcgtgtctgatgtccaggagagcttcatctgggtcaggtacaagcgcaatgaaaaccag
ctcatcatctttgctgacgacacctatccccgctgggtcacaacggccagcctcttggac
tatgatactgtggctggggctgacaagttcggcaacatttgtgttgtgaggctcccacct
aataccaatgatgaagtggatgaagacccgacaggaaacaaggccctgtgggaccgggga
cttctcaatggtgcctcacaaaaggcagaagtaatcatgaattatcatgtgggggagaca
gtactttccttacagaagaccacactgatcccaggaggctcagaatctcttgtctacact
accttgtcaggcgggattgggatccttgtgcctttcacatcccatgaggatcatgacttc
ttccagcatgtggagatgcacctgcggtctgagcatcctcctctctgcggaagggaccac
ctcagcttccgttcctactacttccctgtgaagaatgtgattgatggggacctttgtgaa
cagttcaactcaatggagcccaacaaacagaaaaatgtatcagaagaattggacaggaca
ccacctgaggtctcaaagaagctagaagacatccgtacccgctatgctttctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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