KEGG   Phascolarctos cinereus (koala): 110196529
Entry
110196529         CDS       T05867                                 
Symbol
SMARCA1
Name
(RefSeq) LOW QUALITY PROTEIN: probable global transcription activator SNF2L1
  KO
K11727  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 1 [EC:5.6.2.-]
Organism
pcw  Phascolarctos cinereus (koala)
Pathway
pcw03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:pcw00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    110196529 (SMARCA1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pcw03036]
    110196529 (SMARCA1)
Chromosome and associated proteins [BR:pcw03036]
 Eukaryotic type
  Chromatin remodeling factors
   NuRF complex
    110196529 (SMARCA1)
   CERF complex
    110196529 (SMARCA1)
SSDB
Motif
Pfam: SNF2-rel_dom SLIDE HAND Helicase_C ResIII DEAD HDA2-3 DBINO Myb_DNA-binding ERCC3_RAD25_C CHDII_SANT-like TPR_15 UBA_2
Other DBs
NCBI-GeneID: 110196529
NCBI-ProteinID: XP_020825492
UniProt: A0A6P5ITT7
Position
Unknown
AA seq 1038 aa
MELQQSGPGTRAEEEPGPSTAREAGAVPGDRGEEEEEEKNDPPFQLKPPPKACRPEKEID
SEYEEKMKTDRAKRFEFLLKQTELFAHFIQPAAQKSPTSPLKVKVGRPRVKRDEKQCLLS
AGDYRHRRTEQEEDEELLSESRKTSNVCVRFEVSPSYVKGGTLRDYQVRGLNWMISLYEN
GVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRA
VCLIGDKDARAAFIRDVMMPGEWDVCVTSYEMVIKEKSVFKKFNWRYLVIDEAHRIKNEK
SKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGD
QKLVERLHAVLKPFLLRRIKAEVEKSLPPKKEVKIYLGLSKMQREWYTRILMKDIDILNS
AGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDTHLVNNSGKMVALDKLLSKLKE
QGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIDTFNAPNSTKFIFML
STRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEDRI
VERAEIKLRLDSIVIQQGRLIDQQSNKLAKDEMLQMIRHGATHVFASKESELTEEDITTI
LERGEKKTAEMNERLQKMGESSLRNFTMDTETSLYNFEGEDYREKQKLSMMEWIEPPKRE
RKANYAVDAYFREALRVSEPKVPKAPRPPXQPNIQDFQFFPPRLFELLEKEILYYRKTIG
YKVPRNPELPNSAQAQKEEQKKIDEAEPHTAEETEEKEKLLTQGFTNWNKRDFNQFIKAN
EKYGRDDIDNIAREVEGKSPEEVIEYSAVFWERCNELQDIERIMAQIERGEARIQRRISI
KKALDAKIARYKAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKMGFDKENVYEELRQCV
RNAPQFRFDWFIKSRTAMEFQRRCNTLISLIEKENMEIEEKERAEKKKRGVKGPMTQKRK
AEPAAESSGKKDAKKVKS
NT seq 3117 nt   +upstreamnt  +downstreamnt
atggagctgcagcagtccggccccgggaccagagcggaggaggagccgggaccgtccaca
gctcgggaggcgggagcggtccccggggaccggggggaagaggaggaagaggagaaaaat
gaccctccttttcaactgaaaccacctcctaaagcttgcagacctgaaaaggaaattgat
tccgaatacgaagagaagatgaaaacagaccgagcaaaaagatttgaatttctactgaag
cagaccgagctttttgctcatttcattcagcctgcggcccagaagtcgccaacatcgcca
ctgaaggtgaaagtgggccgtccccgagtgaagcgcgatgaaaagcaatgccttctttca
gctggggattaccgccacagacggacggagcaagaagaagacgaggaactgttgtctgag
agccgaaaaacgtcaaatgtttgtgtccgatttgaagtatctccttcatatgtgaaagga
ggaacgctgcgagattatcaggttaggggcctgaactggatgatttccctctatgaaaat
ggagttaatggcattctggcagatgaaatgggtcttggaaaaactctacaaacgattgcg
ttgcttggctatctgaaacactatcggaacattcctgggcctcacatggttttggttccc
aaatcaactttacacaactggatgaatgaatttaaacgctgggtaccctctctgcgggct
gtttgtctcattggggacaaggatgcaagagccgctttcattcgtgacgtaatgatgcca
ggagagtgggatgtttgtgtcacatcctatgaaatggtaattaaagaaaaatccgtgttc
aaaaagtttaattggcggtacttagtcattgatgaagcccacagaatcaagaatgaaaaa
tccaagctttctgagattgttcgggagtttaagaccacaaaccggttgttactaactgga
acgccattgcaaaataatctgcatgagctctgggcattactcaatttcttgttgcctgac
gtcttcaattctgcagatgattttgattcctggtttgacactaaaaattgtcttggtgat
caaaagcttgtggaaagactacatgcagttttaaaaccatttttgttacggcgtataaaa
gctgaagtagaaaagagcctacctcctaaaaaggaagtaaaaatttaccttggcctaagt
aagatgcaaagggaatggtacacgcggatcctgatgaaagatattgacattttaaattcg
gccggaaagatggataaaatgcgcctgctgaatattctcatgcaattgcgaaagtgctgt
aatcatccctacctgtttgatggtgctgaacctggcccgccgtatacaactgacacccat
cttgtcaataacagtggcaaaatggtggctttggataaactcttgtcaaaactcaaagaa
caggggtcaagagtcctcatttttagccagatgacacgattactggatatcctggaggat
tattgcatgtggcggggttatgagtactgtcggcttgacggccagacaccgcatgaggaa
agagaggaagctatagatacctttaatgctcctaacagtaccaaattcatttttatgctg
agtacaagggctggaggtcttggaattaatttggccactgcggatgtggttatattatat
gattcagactggaatccacaggttgatctgcaagctatggatcgagctcatcgtattggt
cagaagaagccagtacgggtgttccggcttattactgacaacaccgttgaagacaggatt
gtagaaagagcagagataaaattgaggcttgactctattgtaatacagcaaggtaggctc
attgatcaacagtctaacaagttggcaaaagatgagatgcttcagatgatccgtcatgga
gccacgcatgtttttgcttccaaagaaagtgaactgacagaggaagacattacaactatt
ttagagagaggagaaaagaagactgcggaaatgaatgaacggctgcagaaaatgggggag
agctctcttagaaatttcaccatggacaccgaaacaagtttgtacaactttgagggtgaa
gattatagagaaaaacaaaagctcagcatgatggagtggatagagcctccgaagcgagag
cgcaaggccaattacgcagtggatgcctatttcagggaggctttacgtgttagtgagccg
aaagttccaaaggccccccgaccaccanaacaaccaaatatccaagattttcagttcttt
ccaccacgtttatttgagcttctggaaaaagaaattctttattatcggaagactataggt
tataaggtgccaaggaatcctgaactccccaattcagcccaggctcagaaagaggagcag
aagaagattgacgaagctgagcctcacacggctgaggagactgaggagaaagaaaaactt
ctcacccagggattcacaaactggaacaaacgagattttaaccagtttattaaagctaat
gagaagtatgggcgtgatgatatagataatattgcccgagaggtggagggaaaatcacct
gaggaggtcattgaatattcagctgtgttttgggagcgttgtaatgagctacaagatatt
gaaagaatcatggctcagattgaacgaggagaagctagaattcagcgacggatcagtatc
aagaaagccctggatgccaaaatagcaagatacaaggcaccatttcatcagctgcgcatt
cagtatggaaccaacaaagggaagaactacactgaagaggaagatagatttttgatttgt
atgctccataaaatgggctttgacaaggaaaatgtgtatgaagagttacggcagtgtgtg
cgcaatgctcctcaatttcgatttgattggtttatcaaatcaagaactgccatggaattc
cagaggcgctgtaatactctcatatcattgattgaaaaagaaaacatggaaattgaagaa
aaagaaagagcagaaaaaaagaaacgtggagtaaaagggccaatgacccagaaaagaaag
gcggagccagctgctgagagctctggcaagaaggatgccaagaaggtgaaatcttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (13)   
   Pfam (13)   
All databases (23)   

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