KEGG   Phascolarctos cinereus (koala): 110205362
Entry
110205362         CDS       T05867                                 
Symbol
COL5A1
Name
(RefSeq) collagen alpha-1(V) chain isoform X1
  KO
K19721  collagen type V/XI/XXIV/XXVII, alpha
Organism
pcw  Phascolarctos cinereus (koala)
Pathway
pcw04820  Cytoskeleton in muscle cells
pcw04974  Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:pcw00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    110205362 (COL5A1)
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    110205362 (COL5A1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:pcw00536]
    110205362 (COL5A1)
Glycosaminoglycan binding proteins [BR:pcw00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   110205362 (COL5A1)
SSDB
Motif
Pfam: Collagen COLFI Laminin_G_2 Laminin_G_3 Laminin_G_1
Other DBs
NCBI-GeneID: 110205362
NCBI-ProteinID: XP_020837577
UniProt: A0A6P5JTL4
Position
Unknown
AA seq 1836 aa
MDAHTRWKRRSWIRDCPLLVATFLLSAVWPSHAAQPADLLKVLDFHNLPDGITKTTGFCA
SRKSSKGPDVAYRVTKDAQLSAPTKQLYPASSFPEDFSILTTVKAKKGNQAFLVSIYNEQ
GIQQIGLEMGRSPVFLYEDHMGKPGPEDYPLFRGINLSDGKWHRIAISVQKKNVTLVLDC
KKKTTKFLDRSDHPIIDVNGIIVFGTRILDEEVFEGDIQQLLIIPDARAAYDYCEHYSPD
CDTAVPDTPQSQDPNPDEYYPEGEGDGETYYYEYPYYEDPDDPGKTPTPTKKPVEAAREA
TEVAEEQTPPPTDAPPVPETNEGDDKEDPNLGGSDYEYGPINEEYYTPPPYEDIYESVDS
PDQPTDPVGGAEIPTSTVIITNSTNTGPFPDPDPGRDDIDNDFAVETIKDLENYYDPYFD
PTISPSEIGPGMPANQDTIYEGIGGPRGEKGQKGEPAIIEPGMLIEGPPGPEGPAGLPGP
PGTAGPTGQVGDPGERGPPGRPGLPGADGLPGPPGTMLMLPFRFGGGGDAGSKGPLVSAQ
ESQAQAILQQARLALRGPAGPMGLTGRPGPVGPPGSGGLKGETGDMGPQGPRGVQGPPGP
AGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGSPGDDGE
RGDDGEVGPRGLPGEPGPRGLLGPKGPPGPPGPPGVTGMDGQTGPKGNVGPQGEPGPPGQ
QGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPGP
QGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGP
EGPKGRGGPNGDPGPLGPAGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGRGT
PGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDGPSGPPGERGPNGPQGPTGFPGP
KGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPGP
PGEQGLPGLAGKEGTKGDPGPAGIPGKDGPPGLRGFPGDRGLPGPVGALGLKGNEGPPGP
PGPAGSPGERGPAGAAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGIQGPVGL
PGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQGPPGPIGPQGPIGQPGPSGGDGEPGP
RGQQGLFGQKGDEGPRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGP
PGADGPQGPPGGIGNPGAVGEKGEPGESGEPGLPGEGGLPGPKGERGEKGESGPSGAAGP
PGPKGPPGDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGE
PGPSGPPGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGI
PGPVGEQGLPGSPGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGD
RGLPGPQGSSGPKGEQGITGPSGPLGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHPGP
PGPPGPPGEVIQPLPIQASRTRRNIDASQLLDDGNGENYMDYADGMEEIFGSLNSLKLEI
EQMKHPLGTQHNPARTCKDLQLCHPDFPDGEYWVDPNQGCSRDSFKVYCNFTAGGETCIF
PDKKSEGARITSWPKENPGSWFSEFKRGKLLSYVDSEGNPVGVVQMTFLRLLSASARQNI
TYNCYQSVAWQDATTGSYDKAIRFLGSNDEEMSYDNNPYIRALMDGCATKKGYQKTVLEV
NSPKVEQVPIVDIMFNDFGEASQKFGFEVGPACFMG
NT seq 5511 nt   +upstreamnt  +downstreamnt
atggacgcccacacacggtggaaacggcgaagctggatacgcgactgcccgctcctggtc
gccaccttcctcctctccgccgtctggccgagccacgcagctcaaccagcagatctctta
aaggtattagatttccacaatttgcctgatgggataacaaaaacaacaggtttctgtgca
agcagaaaatcttccaaaggaccagatgttgcttaccgagttacaaaagatgctcaactc
agtgcacccaccaagcagctgtatcctgcttcatcatttcctgaggacttctccattcta
accactgtaaaagccaaaaaaggcaaccaggccttcctggtctccatttataatgagcag
gggatccaacagattggcctggagatgggcaggtctcccgtcttcctctatgaggaccac
atggggaaacctggaccagaggactatccactcttcaggggcattaacttatcagatggc
aagtggcacagaatagctattagtgttcaaaagaaaaatgtgactttggtattggactgt
aaaaagaagacaaccaagttcttggaccggagtgaccaccccatcattgatgtcaatggg
atcattgtatttggcaccaggatcctggatgaggaagtgtttgagggtgatatccagcag
ctccttatcatccctgacgccagagcagcttatgattactgcgaacattacagcccggat
tgtgatactgctgttccagacaccccacagtctcaggaccccaacccagatgaatattat
ccagaaggagagggagatggtgagacatattactatgaatatccgtactatgaagaccct
gatgacccaggaaaaaccccgacccccactaaaaagcctgttgaagctgctagagaagcc
acagaagttgctgaggagcagactccacccccgacagatgcaccaccagttcctgaaacc
aacgaaggggacgataaggaggacccaaacctgggagggagtgactacgagtatggaccc
atcaacgaggaatactacacaccacccccttatgaggatatctatgagagcgttgatagt
cctgaccagcccaccgaccctgttggaggagctgagattcccaccagcactgtgatcatc
accaactccaccaatactggaccatttccagacccagatccaggcagagatgacatagat
aatgattttgctgtggaaactattaaggaccttgaaaattactatgatccctattttgat
cccaccatctccccatcagagattggaccagggatgcctgcaaaccaagatacaatctat
gaagggattggaggaccccgaggtgagaaaggacaaaagggagagcctgcaatcattgag
ccaggaatgcttattgaaggcccccctggcccagaaggccctgctgggcttccaggacct
ccagggactgctggaccaacaggtcaagtgggtgatccaggagagaggggtcctcctggc
cgcccaggccttcctggagctgatggtctgccaggacctccagggaccatgcttatgctg
cctttccgatttggagggggcggtgatgcagggtcaaaaggaccattggtctcagcccag
gagtcacaagctcaagccattctacagcaggccaggttggcactaaggggtccagcaggc
ccaatgggtcttaccgggagaccaggtcctgtgggtcctcctgggagcggtggtttaaag
ggagagacaggagatatgggacctcagggtcctcgtggtgtccaaggcccacctggacca
gcaggaaagcctgggagaaggggacgagctgggagtgatggtgctaggggaatgcctgga
caaactggacccaagggtgaccgtggttttgatggattggctggtttgcctggagagaag
ggacataggggtgatcctggtccttcaggtcccccaggttctccaggagatgatggtgaa
agaggtgatgatggagaggttggacccagaggtctacctggagagcctggacctcgtggt
ttgcttggaccaaagggcccacctggcccacctggaccccctggtgtaacgggcatggat
ggacaaactggcccaaagggaaatgtgggtcctcagggtgaacccggccccccaggacaa
cagggtaatccaggtgcccagggtcttccaggtcctcagggtgcaattggtccaccagga
gaaaaaggccccttaggtaaacctgggcttccaggaatgcctggcgcagatggacctcct
ggacatcctggcaaagaaggccctccaggggagaaaggtggtcagggcccacctggtccc
cagggtccaatcggatatccgggccctcgaggagtcaagggggcagatggtatccgtggt
ttgaaaggcaccaagggtgaaaagggtgaagatggctttcctggatttaaaggtgacatg
ggcattaagggagaccgaggtgagattgggccacctggacctagaggagaagatggccca
gaaggcccaaaaggtcgtggtggtcctaatggggacccaggcccccttggtcctgctgga
gaaaagggaaaacttggagtcccaggcttaccaggctacccaggaagacaaggtccaaag
ggttctattggatttcctggcttccctggagcaaatggagagaagggtggaaggggaaca
cctggaaaaccaggaccgagaggacaaagaggtccaacgggcccacgtggtgaaagaggt
ccaagagggatcactggtaaacctggacctaagggcaattctggtggtgatggcccatct
ggtcctcctggagaacggggacctaatggacctcaaggacccacaggatttcctggacca
aaaggccctcctggtcctccagggaaggatggacttcccggtcacccgggacagagaggt
gaaactggcttccaaggcaagactggtcctccaggcccgccaggtgttgttggcccccag
ggccccactggagaaactggcccaatgggagaacgtggtcatcctggcccacctggccct
ccaggtgagcagggtcttccaggccttgctggaaaggaaggaactaagggtgatccaggc
cctgctggcatccctgggaaagatggtcctccaggcttgagaggattccctggtgatcga
ggtctccctggcccagtgggagccctcggattgaaaggcaatgaaggtcctcctggtccc
ccaggtccagcgggatctccaggtgaaaggggcccagctggtgctgctggaccaattggc
cttcctggcagacctggaccccaaggcccacctgggcctgctggtgagaaaggtgcccct
ggtgagaaaggtcctcaagggccagctggccgagatggaattcaaggtcctgtagggctc
cctggcccagcaggtcccgtgggcccacctggagaagatggagataagggtgagattgga
gagccagggcagaagggaagcaaaggagacaaaggtgaacagggcccaccaggtcctata
ggtcctcaaggccccattggacagcctggcccctctggaggtgatggagagccaggtcca
cggggccagcaaggtctttttgggcagaaaggtgatgaaggtccaagaggttttcctggt
cccccagggccagttggattgcagggcttaccaggacccccaggtgagaaaggagaaacg
ggagatgtcggtcagatgggccctcctggtccccctggtccccgaggaccatctggccct
ccaggagctgatggtccccaaggtcctccaggaggaataggaaatcctggagcagtggga
gaaaagggtgagcctggtgaatctggtgaacctggccttccaggtgaaggtggtctcccg
ggacccaaaggagaaagaggagaaaagggtgaatcaggtccgtccggtgctgcaggacct
cctgggcccaaaggccctcctggtgatgatggaccgaaaggcagccctggccctgttggt
ttccctggtgatcctggtccccctggagaacctggtcctgcgggtcaagatggtccacca
ggtgataaaggagatgatggtgaacctggtcaaactggatccccaggccctactggtgaa
ccagggccatctggacctccaggaaaaaggggtcctcccggaccagctggccctgaagga
agacaaggagagaaaggagccaagggtgaagctggcttggagggcccacctggaaagact
ggtccaattggtccccaaggtgcaccaggaaagcctggtcctgatggccttcgagggatt
ccaggccctgtgggagaacaaggtctaccaggatctcctgggccagacggtccccctggc
cccatgggtcccccaggccttccaggtctgaagggagattcaggtcccaaaggtgaaaag
ggtcatccaggtttgattggtcttattggacctcctggtgagcagggtgaaaaaggtgac
cgaggtcttcctggacctcagggttcatcaggtcctaaaggagaacagggtataactggt
ccttctggtccccttggtccccctggacctcctggtttaccaggccctcctggtcccaaa
ggtgctaaaggttcttcgggtccaacaggtcccaaaggagaggccggccaccctgggcct
cctggtccacccggtcctccaggtgaagtcattcagccattgcccattcaggcttctagg
acccgacggaacattgatgccagccagttgcttgatgatggtaatggtgagaactacatg
gattatgccgatggtatggaagagatctttggctcactcaactctttgaaactggaaatt
gagcagatgaagcatcccttaggtactcagcacaatcctgctcgtacctgcaaagacttg
cagctctgccaccctgacttccctgatggtgaatattgggttgacccgaaccaaggatgc
tccagggattctttcaaagtttactgcaatttcacagctggtggagaaacttgcatcttc
cccgataagaaatcagaaggagccagaattacttcctggcccaaggaaaacccaggctcc
tggttcagtgaattcaagcgtggtaaactgctctcctacgtggactcagaggggaatcca
gtcggagtggtacagatgacattcctcaggctcctcagtgcttctgcacgtcagaacatc
acttacaactgctaccagtcagtcgcctggcaagatgccaccacgggcagctatgacaaa
gccattcgcttcttgggctccaatgatgaagagatgtcctatgacaacaacccttacatc
cgagctctcatggatggctgtgcaacaaagaaaggctaccagaagacggttctcgaagtc
aactcccccaaagtggaacaagtacctattgtggacattatgtttaatgacttcggtgaa
gcctcacagaaatttggattcgaagtgggaccagcttgcttcatgggttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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