KEGG   Phascolarctos cinereus (koala): 110216713
Entry
110216713         CDS       T05867                                 
Symbol
CNOT6
Name
(RefSeq) CCR4-NOT transcription complex subunit 6 isoform X1
  KO
K12603  CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
Organism
pcw  Phascolarctos cinereus (koala)
Pathway
pcw03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pcw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    110216713 (CNOT6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcw03019]
    110216713 (CNOT6)
Enzymes [BR:pcw01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     110216713 (CNOT6)
Messenger RNA biogenesis [BR:pcw03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     110216713 (CNOT6)
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     110216713 (CNOT6)
SSDB
Motif
Pfam: Exo_endo_phos LRR_8 LRR_4 LRR_1
Other DBs
NCBI-GeneID: 110216713
NCBI-ProteinID: XP_020854280
UniProt: A0A6P5L7K5
Position
Unknown
AA seq 552 aa
MPKEKYDPPDPRRMYTIMSSEEAANGKKSHWAELEISGKVRSLSSSLWSLTHLTALHLSD
NSLSRIPSDIAKLQNLVYLDMSSNKIRSLPAELGNMVSLRELHLNNNLLRVLPFELGKLF
QLQTLGLKGNPLTQDILNLYQEPDGTRRLLNYLLDNLAVATEQPPPRSWIMLQEPDRTRP
TALFSVMCYNVLCDKYATRQLYGYCPSWALTWEYRKKAIMQEILSCNADIISLQEVETEQ
YYSFFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQL
AMANSEGSEAMLNRVMTKDNIGVAVLLELRKELIEMSSGKPHLGTEKQLILVANAHMHWD
PEYSDVKLVQTMMFLSEVKNIIDKASRSLKSSALGELGTIPLVLCADLNSLPDSGVVEYL
STGGVETNHKDFKELRYNESLTNFSCNGKNGTTNGRITHGFKLKSAYENGLMPYTNYTFD
FKGIIDYIFYSKPQLNILGILGPLDHHWLIENNISGCPHPLIPSDHFSLFAQLELLLPFL
PPVNGIHLPGRR
NT seq 1659 nt   +upstreamnt  +downstreamnt
atgcccaaagaaaagtacgatccacctgacccccggaggatgtacacaattatgtcctca
gaggaagcagccaatgggaagaaatcacactgggcagagcttgaaataagtggaaaagta
agaagcttaagctcatctttatggtcactgacccacttgacagctttgcatctcagtgat
aattctttatcccgcattccttcagacattgccaagcttcaaaatttggtttatctggac
atgtcctctaataaaatccgtagtttaccagcagaactcggaaacatggtgtcactcagg
gaactccatttaaataacaacctgttacgagttctaccttttgagctgggaaaactgttt
cagttacagactttaggtctaaaaggaaatccacttacacaagatatattgaacctctat
caggaaccagatgggacaagaaggctactgaactatttgcttgataatttggcagtggca
acagaacaaccacctccaagatcttggattatgctacaagaaccagacagaacaaggcca
actgctttgttttctgtcatgtgctacaacgttctttgtgataagtatgcaacccggcag
ttatatggctattgtccatcatgggcacttacttgggagtacagaaaaaaagccattatg
caggaaatcttgagctgcaatgccgacatcataagtcttcaggaggttgaaactgaacag
tattacagtttttttctggtagagctaaaggaacgcggctataatggattctttagtcca
aaatctagagctaggacaatgtcagaacaggaaagaaaacatgttgatggttgtgcaata
ttcttcaagacagaaaaattcacattggttcagaaacacactgttgaattcaatcaacta
gcaatggcaaattcagaagggtctgaagctatgctgaacagagttatgacaaaagataac
attggagttgcagtgctactagaacttcgaaaagaattgattgaaatgtcatctggaaag
ccacatcttggaacagaaaagcagcttattcttgttgctaatgcacatatgcattgggat
cctgaatattctgatgtgaaattggtacaaactatgatgttcctctctgaagtaaagaac
attattgacaaagcctctcggagtctcaagtccagtgcactaggagaacttggaaccatt
ccacttgtgctgtgtgcagatctcaattctttaccagactctggtgttgtagaatacttg
agtactggtggagtagaaacaaatcataaggatttcaaagaactaagatacaacgaaagt
cttactaacttcagctgtaatgggaaaaatggaacgacaaatggaaggattacacatggt
ttcaagttaaagagtgcctatgagaatggcctaatgccttatacaaattacacatttgat
ttcaagggtattattgactacatcttctactctaaacctcagctgaacatcctaggcatt
cttggacctctggatcaccattggctaatagagaacaatataagcggctgtccacaccca
ctcatcccttctgaccacttctcactttttgcacaactggagctcttactacccttcctg
cccccagtcaatggtatccaccttcctggcaggaggtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (4)   
   Pfam (4)   
All databases (20)   

Download RDF
DBGET integrated database retrieval system