KEGG   Phascolarctos cinereus (koala): 110223176
Entry
110223176         CDS       T05867                                 
Symbol
CPSF4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4 isoform X1
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
pcw  Phascolarctos cinereus (koala)
Pathway
pcw03015  mRNA surveillance pathway
pcw05164  Influenza A
Brite
KEGG Orthology (KO) [BR:pcw00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    110223176 (CPSF4)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    110223176 (CPSF4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pcw03021]
    110223176 (CPSF4)
   03019 Messenger RNA biogenesis [BR:pcw03019]
    110223176 (CPSF4)
Transcription machinery [BR:pcw03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     110223176 (CPSF4)
Messenger RNA biogenesis [BR:pcw03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     110223176 (CPSF4)
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 zf-CCCH_3 Torus zf-CCCH_2 zf-CCHC zf-CCCH_4 zf-C3H1 zf-CCHC_3
Other DBs
NCBI-GeneID: 110223176
NCBI-ProteinID: XP_020864196
UniProt: A0A6P5M7P0
Position
Unknown
AA seq 269 aa
MQELIASVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPSCKFMHPRFELPMGTTEQPP
LPQQTQPQAKQNNNPPLQRSSSLIQLTSQNSSPNQQRTPQVIGVMQSQNNNVGNRGPRPL
EQVTCYKCGEKGHYANRCTKGHLAFLSGQ
NT seq 810 nt   +upstreamnt  +downstreamnt
atgcaggagctcatcgcgagcgtggaccacatcaagttcgatctggagatcgcggtggag
cagcagctgggggcgcagcctctgcccttccccggcatggacaagtcgggggctgctgtc
tgtgaattttttttgaaagctgcctgtggaaaaggggggatgtgcccgttccgtcacatt
agtggcgagaagactgttgtgtgcaaacactggcttcgaggactgtgcaagaagggagac
cagtgcgaattcctgcacgagtatgatatgaccaagatgcctgagtgttacttctactcc
aaattcggggagtgcagtaacaaagaatgtccctttctccacattgacccggaatccaag
atcaaagattgcccttggtatgaccgaggcttctgcaaacatggtcctctctgcaggcac
aggcataccagaagagtcatttgtgtgaattaccttgtcggattctgtccagaagggcct
tcctgtaaattcatgcaccctcgatttgaattgcccatggggaccacagaacagccaccc
ctgcctcaacagacacagcctcaggcaaagcaaaataacaatccaccattacaaaggtcg
tcctccttgatccagttaacgagtcagaactcttctcccaatcagcagagaaccccgcag
gtcattggggtcatgcagtctcaaaacaacaacgtgggcaacaggggaccccggccgttg
gagcaggtcacctgttacaagtgtggcgaaaaaggacattatgccaacagatgcaccaaa
ggacatttggcttttctcagtggacaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (9)   
   Pfam (9)   
All databases (25)   

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