KEGG   Plasmodium cynomolgi: PCYB_063130
Entry
PCYB_063130       CDS       T02490                                 
Name
(RefSeq) DNA repair helicase
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
pcy  Plasmodium cynomolgi
Pathway
pcy03022  Basal transcription factors
pcy03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pcy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    PCYB_063130
  09124 Replication and repair
   03420 Nucleotide excision repair
    PCYB_063130
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pcy03021]
    PCYB_063130
   03400 DNA repair and recombination proteins [BR:pcy03400]
    PCYB_063130
Enzymes [BR:pcy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PCYB_063130
Transcription machinery [BR:pcy03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     PCYB_063130
DNA repair and recombination proteins [BR:pcy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     PCYB_063130
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C SNF2-rel_dom
Other DBs
NCBI-GeneID: 14691821
NCBI-ProteinID: XP_004221528
UniProt: K6UCW9
Position
6:927330..931078
AA seq 792 aa
MEDSGDHSSTNSHKRGVHKRSDILNEDYYARSEKRRKLKAAKKMGEEGEFPQNVKSKLKE
YYEMRFDKRVINLPFSTDSINIQQRGFHDYSKDMKLKKNHMNKPLWICSDGFIYLEMFNS
CSKQASDFLITIAEPICRPELIHEFQLTIFSLYAAISVGVTLDELLVNLDKFSKNFLPNE
LVHNITKSAESFGKAKLVLRENKYYIEATNKSELDYLLKNSIIKNARLYSSDNNSDHKIK
NMFTRNNNFQESKTGQGAADSSAPNIGAANNQSNFLSEAGSDRKPKDTYVTYEAPVLDTA
QLGFKISESEKQLMLQEKKNANENLNENSATSAEVYSFEVNCDKIEEVKQEALQTMQRPL
LMEYDFRRDKKNPNLICSLKSHVQIRYYQEKALRKMFSNGRSRSGIIVLPCGVGKTLTGI
TAASTIKKSSLFLTTSAVAVEQWKKQFEDFTNIHPRHIRILTSDYKFDLWPINEAGVLIS
TYTMLAYSGKRSEQSLKIVNDIRRREWGLLVFDEVQFAPAPSFRRINDIVKSHCKLGLTA
TLVREDLLIRDLQWIIGPKLYEANWVELQNKGFLAKALCKEIWCSMPSSFYKYYLKSNSF
IKRRLYTCNPRKLMMCEYLIKYHEQNNDKIIVFSDNIFALLHIAKTLNKPFIYGKLSPIE
RIAIINKFKNDSNINTILLSKVGDNAIDIPIANVVIQISFNFASRRQEAQRLGRIIRPKN
KANEKKNINDPDSFFYSLVSKDTIEMCYSDKRQRFLINQGYAYNVLSDNIVDFNKLNLGK
NSKLFVNAKTTE
NT seq 2379 nt   +upstreamnt  +downstreamnt
atggaggattcgggtgatcacagcagcacgaattctcacaagaggggggttcataaaaga
tcagacattttaaatgaggattactatgccagaagtgagaaaaggcgcaagctaaaggct
gccaagaagatgggcgaagaaggggagttcccccaaaacgtgaagagcaaactgaaggag
tactacgaaatgcgcttcgacaaaagagtgataaacctgccattcagcacagactcaata
aacatccaacagagggggtttcatgattacagtaaagacatgaaattaaaaaaaaatcac
atgaacaagccattgtggatatgctcagacggttttatatacttagaaatgtttaacagt
tgtagtaagcaggcatcggattttctcataacgattgcggaaccgatctgtagaccagaa
ttaattcacgaatttcagctaactattttttctttatatgcagccatatccgtgggggtt
accctcgatgagttgttagtaaacttggacaaattttcgaaaaactttttgccaaacgag
ttagtacataacattaccaaaagtgccgaatcgtttgggaaggcaaaattagtacttaga
gaaaacaagtactacattgaagctacaaataaatcagagttggattatctattaaaaaat
agcataataaaaaatgcaaggttgtattcaagtgacaataacagtgaccataaaattaag
aatatgtttacgcggaacaataattttcaggagagtaaaactggtcaaggtgcagctgat
agtagtgcacctaatattggtgcagctaataatcagagcaattttttaagcgaagctggc
agcgataggaagccgaaggatacctacgtgacgtacgaggcgcccgtcttggacactgct
cagctgggcttcaaaataagcgaaagcgaaaagcagctaatgctacaggagaaaaagaat
gcgaatgaaaatttaaacgagaattcagcaacgtcagctgaggtttattcatttgaagtg
aactgcgataaaatagaagaggtaaaacaggaggcattgcaaacaatgcagaggcctcta
ctaatggaatacgattttaggagagataaaaagaaccccaatttaatttgctcgttaaaa
agtcatgtgcagattaggtactaccaagaaaaggctttgagaaaaatgttcagcaatggg
aggagtaggtcgggcattatagttcttccctgtggtgtgggtaaaacgttgacaggaatt
acagctgctagtactattaagaagtcgtccctctttttaaccacatcagcggtagctgtg
gagcaatggaaaaagcagttcgaagatttcacaaatatacatccaaggcatataagaatt
ttgacttcggattataaattcgatttgtggccaattaacgaagcaggggtgttaatttcg
acatacaccatgttggcatactcaggaaaaaggagtgaacaaagtttgaagattgtaaat
gacataaggagaagagagtggggattactcgtttttgacgaggtgcagtttgccccagca
ccatcatttagaagaataaacgatatagtaaaatcgcattgtaagctgggtctaacagca
accctggtaagggaagatttgctgatcagggatttacagtggattattgggcccaagttg
tacgaagctaattgggttgaactgcaaaacaaagggttcttggcgaaagccttgtgcaaa
gaaatatggtgtagtatgcccagctcgttttataaatactatttgaagtcaaacagcttt
attaagagaagactctacacttgcaaccccagaaagctaatgatgtgtgaatatttaata
aaatatcacgaacagaataatgacaaaattatcgtttttagtgacaacatatttgccctt
ttgcacatcgcgaaaactttaaacaagccatttatatatgggaagctttctcctattgaa
agaatagcaatcatcaacaagtttaaaaatgactccaacattaatactattttgttgagt
aaagttggagataacgcaatcgacattcctattgcaaatgtggttattcaaatatctttc
aattttgcgtcgagaagacaggaggctcaaagattaggaagaattattaggccaaaaaat
aaagctaatgagaaaaaaaacattaacgacccggactccttcttttacagcctggttagt
aaagacaccatagaaatgtgctactctgataagaggcagaggtttctcatcaaccagggc
tatgcctacaacgtccttagtgacaacattgtcgattttaataaattaaatttgggcaag
aatagtaaattatttgtaaacgcaaaaaccacagagtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (20)   

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