KEGG   Plasmodium cynomolgi: PCYB_123350
Entry
PCYB_123350       CDS       T02490                                 
Name
(RefSeq) DNA-directed RNA polymerase III largest subunit
  KO
K03018  DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6]
Organism
pcy  Plasmodium cynomolgi
Pathway
pcy03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pcy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PCYB_123350
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pcy03021]
    PCYB_123350
Enzymes [BR:pcy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     PCYB_123350
Transcription machinery [BR:pcy03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Core subunits
     PCYB_123350
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4
Other DBs
NCBI-GeneID: 14694142
NCBI-ProteinID: XP_004223716
UniProt: K6UVZ2
Position
12:994608..1001546
AA seq 1969 aa
MAELWSEAVDMAELRSEAVDVAELRSEAVDVEGLRVKAVDVAELRTNAADVEGLRVKAVD
VEEFRTNAANVAELRRIIQRTSLRKGFVQDVKSNWEIKSLKFGIMNKEEIIKCSEVKILN
REMYKNNTGIPYPYGVLDLKLGAHKSNSLCETCNRNFMNCSGHFGYIELNYPLFHVGYYK
YIIYILYCICKVCSHILLSNEKLEFYTNLKRRTVEDKFFKKHIFKKILNSCKKVTKCYRC
GYPQGVIKKIIKPSLDQFMKLKHVIKTKENGKMVIKEDDLNSLYVLNLFKNMNPYHIKLL
NVENPEKLLITALLVPPNTIRPSVIIDEHGTAEDDLTCILSEITQLNNTINNQCSNGYQT
NQFLGNVEFLQLQTTRFINSDSPAVSQLLATQNISKPGRGICQRLKGKEGRFRCNLSGKR
VDFSSRTVISPDPNISIDEVVIPEIIAMRLTYPEKVNRYNIEKLKKLIKNGTNTWPGANY
IIKKGCNGRSCSRGGGFSSQGDSIIDVVKRGNPAINKISLKYANKKFVIENLQVGDIVER
HLVNGDIVLFNRQPSLHRMSIMCHKARVMKYKTFRFNECVCSPYNADFDGDEMNLHVPQT
EEARAEALYLMNVKHNLITPKNGEVMIALTQDFLSASYVITNKDTFLDRDSFCLLCSYFS
DAKVDIELPVPAILKPKELWTGKQLISVLIKPNRKENTIINFELKEREYSTKNGDLKHMC
LNDSYVCFYKSELICGSLGKKVLGSSKYGLFYYLIHHNSSYVALKIMNRFSKLTSRYFTN
KGMTIGIDDVTPSDTLIQKKKDLLQAGYEKVNKEILLYNEKKMQIQPGCTLEETLEIKVK
NILDDLRNDAGKTCNQYLDHLNKPLIMFNSGAKGALINIAQMIACVGQQNVTGQRIQNGF
INRTLPHFNIHCKDSESRGFVQNSFYTGLNPTEFFFHTMSGREGLVDTAVKTAETGYMQR
RLMKALEDLSIHYDYSVRSCDKQIVQFIYGDDALNPSYVDNNNSYAHQFDKIFDHIISIS
SSNILLSYGKPDPKPNLAALAAFPAFPASPISRITHRVISKMSASDASPFIPMAHDEHFV
RMVMEKPERNPRWAPRPEAAAGEEEAAVEEDVEEDVEEDVEGRVKLEIEGSVWVAKQGQK
RTKQTKQTRQTKQTRQTRQTKQLTQPKRHHPEDDADEEATTQNNCVLPPHKYQSIARLVN
DYRNVVEIKTLIDKNQICVSESEKKLVRSMYNQMSKNVVKKIEIVNTVYRSEREKSRRSK
GQCQGETNCTSVRDAVGGDTTSADAQGYASASSAHAQGYAPNRRKKRNAQPHSGTNGSHD
RDEVPRLYESKQYKQMIKNVIAFVSVFEYIEKKKQHYILLPYEVVQWTNFLLNYLSELMP
TNIYVHTKLSQRENPTHQERTKTMNIYMKEIKKWLIVKAINVYKFFKNKKGVDLMRRTDY
LDFVRAETYDSSYRYLFYDYPFINLKQLYLFIFFNVSKYFKYISAPGDAVGSISAQSIGE
PGTQMTLKTFHFAGVASMNVTLGVPRIKEIINASSTIQTPILNIPLQVKDNYNFALMMKS
KLEKTTIRDICLYIKEDYTSRGIFLSVKFNEELIHNLFLNINAYSIKEIIMRQSHINKIK
INKVVVEVVNEYKLHMSLKNGEFLFFQMESLKKGLLDLLIHGDKDIKRCIIKKEEVEVTD
DEVEGTGEGVEGTGEGVEGTGEGVEGTGEGVEGKKRPPTAHGDDANHTKGEEATEKERPE
KERPGKELLGKECPKEEKLRNIMEAFKMQIKEEMLKRDNPGGDEEGGEGEGEEELLINLD
TINIDSLNLEKGNALNYVLGLEGVDFKHIISNHVINVFQVLGIEAARVTIINEIKKCIEA
YSIDIDIRHIMLLADIMAFTGDILGINRFGIQKARHSTLMLASFEETNEHLFVSSFFKNR
DEINNISESIIVGKNIPIGTGAFQLLYDYKFNREERKLTLLERAQQEVP
NT seq 5910 nt   +upstreamnt  +downstreamnt
atggcggagttgtggagcgaagcggtggacatggcggagttgcggagcgaagcggtggat
gtggcggagttgcgaagcgaagcggtggatgtggaggggctacgggtaaaagcggtggat
gtggcggagttgcggacaaacgcggcggacgtggaggggctacgggtaaaagcggtggat
gtggaggagttccggacaaacgctgcgaacgtggcggagctgcggaggataatccaacgc
accagcctgcggaaggggttcgtgcaagacgtaaagagcaactgggaaataaaaagtctc
aaattcggaatcatgaacaaggaagaaataataaaatgctcagaggtgaaaattctaaac
agagaaatgtacaaaaacaacacaggtattccatatccgtatggagtcctggatctgaag
ttaggagctcacaaaagtaactccctgtgtgaaacttgtaatcgaaattttatgaactgt
tcaggtcattttggatacattgaattaaactatccacttttccatgtgggatactataag
tacatcatctacatcctctactgcatatgtaaagtatgttcacatatcctactgagtaat
gagaagctggagttttatactaatctgaagagacgtacagtagaggataaatttttcaaa
aaacacatttttaaaaaaattctgaacagttgtaagaaagtaaccaagtgttatcgatgt
ggatatccccaaggagtaataaaaaaaattattaagcctagtttagatcaattcatgaaa
ttaaaacatgtaattaaaacgaaggaaaatggaaaaatggtaataaaagaggatgatttg
aatagtctttacgttttgaatctcttcaaaaatatgaatccatatcatatcaaactttta
aatgtagaaaatccagagaaactactcataacagccttgttggtacctcctaacacgatt
agaccatctgttataattgatgaacatggcacagcagaggatgatttgacatgcattctt
tcagaaatcacacaacttaataacaccattaataatcaatgtagtaatggataccaaact
aatcaattcctaggcaatgtagaatttttgcaattacagactacaagatttattaatagt
gattcccctgctgtgtctcaattactagctactcaaaatatttcaaaacctggtagaggt
atctgtcagagacttaagggtaaagaaggtagatttagatgcaacctttctggtaaaagg
gtagacttctcaagtagaaccgttatttcaccggatccgaatatctctatagatgaggta
gtcattcctgaaattattgctatgagacttacctatccagagaaggtaaatcggtataac
atcgaaaagttgaagaaacttataaagaatggaacgaatacgtggcctggggcaaattac
attattaagaaagggtgcaacgggaggagttgctcaaggggcggcgggttctcctcgcag
ggggattccatcatcgacgtggtgaagcgaggcaaccccgccatcaacaaaatcagcctc
aagtacgcgaacaaaaagtttgttatagagaatctgcaagtaggagacatcgtggagaga
cacctagtaaatggagacatcgtgttgttcaatcggcagccatccctccatcgaatgtct
atcatgtgtcacaaagcgagagtcatgaaatataagacgtttcgattcaacgaatgtgtt
tgctctccttacaatgcggacttcgatggggacgaaatgaatttacatgtaccccaaaca
gaggaagcaagagcagaggctctatatctgatgaatgtaaagcataatttgattactcca
aaaaatggagaagtgatgattgcattgacgcaggatttcctttcagcttcgtacgtcatc
acaaataaggatacctttctggatagggattccttctgtttactatgctcctacttctca
gatgcaaaggtggatatagagttacctgtcccggctatcctaaaaccgaaggaactttgg
acaggtaagcaattgataagcgtactcataaaaccaaacaggaaagaaaacacaataatt
aatttcgaattgaaggagagggaatactcaacgaaaaatggagacctcaagcatatgtgt
ctaaacgattcttatgtgtgtttctataagtctgaattaatttgtggttctttaggaaaa
aaagttttgggttcttctaaatatggtctattctactacctcatccatcataactcatcc
tacgttgctctaaaaattatgaaccgtttttcaaagctcactagtagatacttcacaaac
aaaggaatgactataggtattgatgatgtaactccatcggatactctaattcagaagaaa
aaggatctcctacaagcaggttacgaaaaggtgaacaaagaaatccttctctataatgaa
aagaaaatgcaaatacaaccaggatgtactttagaagaaactctcgaaattaaggtaaaa
aatattttagatgatttacgaaatgatgcagggaagacatgtaatcaatatttagatcat
ttgaataagcctctaattatgtttaattctggagctaaaggagctctcatcaatattgct
caaatgattgcttgtgttggacaacagaatgttacaggtcagaggattcaaaacgggttc
attaataggaccttacctcatttcaatattcattgtaaggactctgaaagtagggggttc
gttcaaaactccttctacacaggtcttaatccaactgagtttttttttcataccatgtct
ggtagagaagggcttgtggacacagctgttaagactgcagaaacggggtacatgcagagg
agactcatgaaggcactcgaggatttgtcaattcattacgactactcagtgcggtcttgt
gacaaacaaattgtgcaatttatttatggggacgatgcactgaacccgtcttatgtagac
aacaataattcgtatgctcatcagtttgataaaattttcgatcacattatttccatttcg
tctagcaacattctgctctcctatgggaagcccgacccgaagcccaatttggccgctttg
gccgcttttcccgccttccccgcctcccccatttcgcgcatcacccaccgggtgatctcc
aaaatgagcgcctcggacgcttcgcccttcatccccatggcgcacgacgagcacttcgtg
aggatggtcatggagaagccggagcgcaaccccaggtgggcgcctcgcccagaagcagcg
gcgggggaagaagaagcagcagtggaagaagacgtggaagaagacgtggaagaagacgtg
gaagggagagtcaaactggaaatagaaggcagcgtatgggtcgccaagcaggggcagaag
cggacgaagcagacgaagcagacgaggcagacgaagcagacgaggcagacgaggcagacg
aagcagctgacgcagccgaagcggcaccaccccgaggatgatgccgatgaagaggcgact
acccaaaacaactgcgtcctgccgccacacaaatatcagtctattgcacgactcgtaaat
gattatcgaaacgtagttgagataaaaacactgatagataaaaatcagatctgcgtgagt
gagtcggaaaagaaactcgtacgaagtatgtacaaccagatgagcaaaaacgtagtgaag
aaaatcgaaattgttaatacggtgtaccggtccgagagggaaaaatcgcgtaggagtaag
gggcagtgtcagggcgagacgaattgcacgagcgtgagggacgcggtgggtggagacacc
actagtgccgatgcgcagggttatgcctccgccagtagtgcacatgcgcagggttatgcc
cccaacaggaggaagaaaagaaacgcacagccgcacagcgggacgaatggcagccacgac
agggatgaagtgccccggctgtacgaaagcaaacagtacaagcaaatgataaaaaacgta
atcgcattcgtgagtgtattcgagtatatcgaaaagaagaagcaacactacattctcctg
ccatatgaagtggtgcagtggaccaattttcttctgaactacctctcagagttgatgcca
acaaatatatacgttcataccaaactatctcaaagggaaaatccaactcatcaggaaagg
accaagacaatgaatatctacatgaaggaaattaaaaagtggttaatagtgaaggccatc
aatgtgtataaattctttaagaacaagaagggggtggatttgatgagacgaactgattac
ctcgactttgtccgtgcagagacgtatgactcatcatatcgataccttttttatgactat
ccctttataaacctgaagcagttgtatttgtttattttttttaatgtttcaaagtatttt
aagtatatctctgctccgggggatgccgtggggtccatttcggcacagtccattggggag
cccggcacgcagatgacgctcaagacgtttcacttcgcaggcgtggccagcatgaacgta
accctaggtgtgccaagaatcaaagaaattataaacgcgtcgagcactattcaaacaccc
atattgaatatccctctacaggtgaaggataattataactttgcactcatgatgaaatcc
aaattggaaaaaactacaataagagatatatgtctctacataaaggaagactacacaagt
cgagggatcttcttatctgtgaagtttaacgaggaactaattcataacttatttttaaac
ataaatgcgtatagcattaaggagataataatgagacagagtcatattaacaaaataaaa
attaacaaagtagttgtagaggtggtaaatgagtataagttacacatgtcgttgaaaaat
ggagagtttttattttttcaaatggagtctctgaagaagggactgctggatctgctcatt
catggggataaggatataaagcggtgtatcattaagaaggaggaggtggaggtcacggac
gatgaggtggagggaacgggtgaaggggtggaaggcacaggtgaaggggtggaaggcaca
ggtgaaggggtggaaggcacaggtgaaggggtggagggaaaaaaacgcccccctactgcc
catggcgacgacgctaaccacacgaaaggagaagaagccaccgagaaggaacgccccgag
aaggaacgccctgggaaggaactccttggaaaggaatgccccaaggaggagaagctgcga
aacatcatggaagcctttaaaatgcaaataaaggaagaaatgctaaaaagggacaaccca
ggaggggatgaagaaggaggagaaggagaaggagaagaagaactgcttatcaacctagat
acgataaatatcgactcgttaaacttagaaaaaggaaacgcgctgaactacgtcctgggg
ttggaaggagtagactttaaacacatcatttccaaccacgtgattaatgtttttcaagtg
ctgggcatcgaagccgccagagtcaccatcatcaatgaaataaagaaatgtatcgaggcg
tacagcatagacatcgatatcaggcacatcatgctgctggcggatatcatggccttcacg
ggagacatccttgggataaaccgcttcggcattcagaaggccaggcacagcacgctcatg
ctggcatccttcgaagagaccaacgaacaccttttcgtttcctcgttttttaaaaataga
gacgaaattaataatatcagtgagagtatcattgtgggaaaaaatattccgattggcacg
ggtgccttccagctcctctacgactacaagttcaaccgagaggaaaggaagctcaccctt
ctggaaagggcgcagcaggaagtgccgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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