KEGG   Pseudomonas chlororaphis PCL1606: PCL1606_29880
Entry
PCL1606_29880     CDS       T03768                                 
Name
(GenBank) ATP-dependent exonuclease
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
pcz  Pseudomonas chlororaphis PCL1606
Pathway
pcz03420  Nucleotide excision repair
pcz03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pcz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    PCL1606_29880
   03430 Mismatch repair
    PCL1606_29880
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pcz03400]
    PCL1606_29880
Enzymes [BR:pcz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PCL1606_29880
DNA repair and recombination proteins [BR:pcz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     PCL1606_29880
   MMR (mismatch excision repair)
    Other MMR factors
     PCL1606_29880
SSDB
Motif
Pfam: UvrD-helicase Viral_helicase1 AAA_19 UvrD_C_2 UvrD_C CIS_tube
Other DBs
NCBI-ProteinID: AKA24439
UniProt: A0A0D5Y0D9
Position
3252414..3253232
AA seq 272 aa
MGFDFEGRPFQFAKGKTRFMDSGNRVYACELGKLAFELMEATPALLRRLECIYDEILIDE
VQDLASFDWEVLEVLLGSKIDVRMVGDVRQAVLSTNPRGQKNKKFGYAASLEWFRDKEAK
GLLTIAYATITYRCRAEIATFSDTIFEATWGFPGTTSENLDETGHDGVFLLHTQHVDKYV
RQFRPQCLRHSVSSAKHLNLDFQNFKGVKGTTFDRVLLAPTVNIESFIKKGTPLEATAAA
AFYVAATRARQSLAIVIDKVGTSTLPVWAPSP
NT seq 819 nt   +upstreamnt  +downstreamnt
atgggcttcgatttcgaagggcgaccgttccagttcgccaaaggcaaaaccaggttcatg
gactcaggaaatcgggtgtatgcctgcgaactcggcaagcttgcctttgaactcatggag
gcgacgccggcgctcctgcgaaggctcgagtgcatctacgacgaaatactgatcgatgaa
gtccaagatctagccagcttcgattgggaagtcctggaagtcctgcttggctctaaaatc
gatgtgcggatggtgggagatgtcaggcaggctgttttatctacaaatccccgaggccag
aagaacaagaaatttgggtacgccgcgtcgctcgaatggtttagagataaagaggctaag
gggttactcaccattgcctatgcgaccatcacctaccgatgcagagccgagattgcgacg
ttttccgataccatcttcgaagccacgtggggcttccctggcactacctcggagaacctc
gatgagactgggcatgatggcgtgttccttctccatactcagcatgtcgataagtacgtc
cgccaatttagaccgcagtgtctaaggcattcggtcagctcggcgaagcacctcaatctg
gattttcagaacttcaaaggggtgaaaggtacgacgtttgaccgagtattgctcgcaccc
accgtcaacatcgaaagcttcatcaagaagggcacacctttggaggccacggctgcagcg
gcgttttatgtcgcggcgacacgtgctcgacaaagtctggccatcgtcatcgacaaggtt
ggtacatccacgctgccagtatgggctccatcgccttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (21)   

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