KEGG   Phoenix dactylifera (date palm): 103697132
Entry
103697132         CDS       T03274                                 
Name
(RefSeq) exosome complex component RRP45A-like
  KO
K03678  exosome complex component RRP45
Organism
pda  Phoenix dactylifera (date palm)
Pathway
pda03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pda00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103697132
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pda03019]
    103697132
Messenger RNA biogenesis [BR:pda03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     103697132
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 103697132
NCBI-ProteinID: XP_008777152
UniProt: A0A8B8ZWN3
Position
Unknown
AA seq 448 aa
MEQRLANTWRMTVNEKKFIETALLSDLRVDGRRPFDYRKLTIKFGREDGSSEVQLGETHV
MGYVTSQLVQPYRDRPNEGTLAIFTEFSPMADPSFEAGRPGESAVELGRVIDRGLRESRA
VDMESLCVVAGKSVWAIRVDLHILDNGGNLIDAANIAALAALLTFQRPECTLGGENGQEV
IVHDPEVREPLPLIVHHLPVAVTFAIFDEGNIMVIDPTYKEEAVMGGRMTATLNSNGDVC
AVQKAGGEGVMSSVIMQCLRIASVKAADITSKIKDAVDAYNTERALRKVKRHPPSVALEV
SVPDVIMKENQVDELSRHRAQNLKDEPERSCSNDGTSIGVEISTSRGKNNAFIGGPSSWD
PYSKGISSCFIRSSQDLPGPLYLAKEQEEAKISQNSIESDPEAANTLSSGPVGASVASQQ
ANSPKSLKDAVKPKNRKKNKASSTSDMS
NT seq 1347 nt   +upstreamnt  +downstreamnt
atggagcagcgattagcgaatacttggcggatgaccgtcaacgagaagaagttcatagag
actgctctcctttccgatctcagagtcgacggccgccggccttttgattaccgtaaactc
accatcaagttcggcagagaggatggctcatcagaggtgcagcttggtgagacccatgtc
atgggctatgtgacttctcaactggtgcaaccttatcgagataggccaaatgaaggaaca
cttgccatatttactgaattttctcccatggctgatccttcattcgaggcagggcgtcca
ggggaatctgcagtagaactagggcgtgttatagatcgtggtctgagggaaagcagagcc
gtggatatggaatccttatgtgttgttgcagggaaatctgtatgggccatccgtgtggac
cttcacattctggataatggaggcaatctcattgatgctgctaatattgctgctttggct
gctctcttgacatttcaaaggcctgaatgtacactaggaggagaaaatggtcaggaagtt
attgttcatgatcctgaggttagggaaccactccctttgatagtccatcatctccccgtg
gcagtaacttttgcaatctttgatgaaggtaacatcatggtgatagatccaacttacaag
gaagaggctgttatgggaggaaggatgactgctacattgaactcaaatggcgatgtttgt
gctgttcaaaaggctggaggagagggtgtcatgtcaagtgtaatcatgcagtgtttgcgg
atagcctctgttaaagctgctgacatcacaagcaaaattaaggatgcagtagatgcatac
aacactgaaagagcattgcgaaaagtaaagcgtcatccaccatcagttgcacttgaagtc
agtgtaccagacgttataatgaaggagaaccaagttgatgagttaagtagacatagagcg
cagaatttaaaagatgagccagagagaagctgtagtaatgatggtactagcattggagtg
gaaattagtacttctagagggaaaaataatgcattcattggtggcccttcaagctgggat
ccgtactcaaagggtatttcatcatgttttattagaagttctcaagatttacctgggcct
ttatacttggctaaggaacaagaggaagcaaaaatcagtcaaaattcaattgaatccgat
cccgaggcagcaaatactttgagttctggccctgttggagcctcggttgcgagccagcaa
gctaactctccaaagagtctgaaagatgctgtgaaacccaaaaataggaagaaaaataaa
gcatcctcgactagtgacatgagctag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (2)   
   Pfam (2)   
All databases (24)   

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