KEGG   Phoenix dactylifera (date palm): 103701784Help
Entry
103701784         CDS       T03274                                 

Definition
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DEAH12, chloroplastic-like
  KO
K12818  ATP-dependent RNA helicase DHX8/PRP22 [EC:3.6.4.13]
Organism
pda  Phoenix dactylifera (date palm)
Pathway
pda03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pda00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103701784
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pda03041]
    103701784
Enzymes [BR:pda01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     103701784
Spliceosome [BR:pda03041]
 Complex C
  Other components
   Step II factors
    103701784
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Helicase_C OB_NTP_bind IBR HA2 zf-C3HC4_2 DEAD AAA_22 zf-RING_UBOX zf-C3HC4 Helicase_RecD SLS zf-RING_2 AAA_30 ABC_tran AAA_19 ABC_tran_CTD MNE1 AAA_29
Motif
Other DBs
NCBI-GeneID: 103701784
NCBI-ProteinID: XP_008782178
UniProt: A0A2H3XDF6
Position
Unknown
AA seq 1736 aa AA seqDB search
MRRGAYPHRCLARPAFRPERPLFWQERPPFRPQPLPHPRRWQQPPEPRPCFVVVLLCSPS
TQKGLSSSYIRDLLVSCPSTPENFLYFQGPVVGKLVFRCWADALEAAVYLWGRRLDGAHL
LTAEIESSTGLLPSQRAEEESRLRALFTGHIRGLLECAAVRRCEGKIEQVDNEIKKVSGM
LMKPNRLASFGKMQDTRRSLEAEKEQLESRLVEFRAAMECLIAYLSEQQEVCEEEEGKFE
IFKLQGELDWSRIHHLMERECRRFEDGLPLYACRRKILSHVFSNQVLVLIGETGSGKSTQ
LAQYLADAGLAADGSILCTQPRKIAAISLAQRVGEESYGCYADNFVVSHPTYSSSKEFNS
RLMFMTDNCLLQHCMNDMSLSGISYIIVDEAHERSLNTDLLLALIKKKLLERLDLRLIIM
SATADAGKLAEYFYGCYTLYVMGRNFPVEIKYIPDISVNTICTTTLTHTSGIYASYVCDV
IKMVRIIHKTEGDGSILAFLTSQMEVEWACENFHDPSAVVLPMHGKLSYEEQSRVFQKYS
GKRKVIFSTNVAETSLTIQDVKYVVDSGMVKESRYEPGNGMNVLKVGRISQSSASQRAGR
AGRTAPGKCYRLYSECDFYSMKTHQEPEIRKVHLGIAVLRILALGSKNMQDFEFVDAPSP
QAIDMAMQNLIQLGAVTNNADVFELTDTGRSLVKLGIEPRLGKIILDCFGCGLRKEGLVL
AAVMANASSIFCRVGSDEDKYKADRLKVPFCHRYGDLFTLLSVYKKWEDKHENKSKWCWQ
NSINAKSMRRCQETVVELEKCLQHELNIIIPNYWLWDPDEPTFHDQILKKIILSSLAENV
AMYSGCDRLGYEVALTGQHVQLHPSSSLLMFSQKPNWVVFGEILSISNQYLVCVTAVDSE
SLCVIQPPLFDIQQLESRRMQMNVITGVGSNLLKRFCGKHNQNLQRIISHIQKVCMDDRI
GIDVDFGKSEIQIFASAKDMEKACSIVNDALEYETKWLRDECVEKCLFPGRPGSSPPVAL
FGSGAEIKHLELDKRHLTVEISHPNAHAIDDKEVLLMVDQCVSGIANYHKYAGNGQEGTD
KWGKITFLSPGAAENAVAKLNEVEFHGSLLKAVPVRAVDNKMHPFSAVRARVCWPRRPSK
GVALITCARGEAELIVRDCFALVVGGRYVNCQVSTKYKNCVFVTGLPRDVSKPELYDAFL
TSTKRKILDIHLLRGEAIPNPPGATCAEALVREISAFMPKKNFRDHSFQVEVFNPEPKDY
MMKALITFDGSLHLEAAKALDHIEGKVLPGCLSWQTIQCEHVFHSHLSCPARVYFVIKKQ
LDSLLESFQRQKGVSYSLEKNDNGSCRVKISANATKTIADLRRPLEQLMKGKTVSHPSLT
PTVLQLLLSRDGMALLKAVERKSGTHILYDRQNLNVKVFGPPKEVAAAEQNLVQSLLSLH
EDRQLEIRLRGRNLPPXLMKEVVQRFGPDLQGLKEMVPGAELTLNTRSHIIGVQGHNSLK
QKVEEVISEVALSVDHGWMAEQPLETSCPICLCELWEPYRLEACGHDFCRSCLVDQLEST
IRSRDSFPICCTKEGCNKLILLVDLRSLLPSQRMEELFRASLGAFVASRSGSYRFCPSPD
CPSVYQVATQDARGGHFACGACLVETCTKCHLEYHPFISCGRYKEYKKDPDLSLVEWRKG
KENIKDCPACGYTVEKVDGCDHIECKCGRHICWVCLEFFKSSDECYSHLRSEHQYY
NT seq 5211 nt NT seq  +upstreamnt  +downstreamnt
atgaggagaggcgcctacccccatcgctgcttggcgcggccggccttccggccggagagg
ccgcttttctggcaggaacggccgcccttccgcccccaacccctgccccacccgaggcgg
tggcaacagccgccggagcctcggccctgcttcgtcgtcgtcctcctctgctctccttcc
acccagaaaggcctctcctcgtcgtacatccgcgacctcctcgtctcctgtccttccacg
ccggagaacttcttatacttccagggccccgtcgtcgggaagcttgtctttcggtgctgg
gccgatgccctcgaggccgccgtctacctctggggccgccgccttgacggcgcccacctc
ctgaccgccgaaatcgagtcctccaccggtctcctcccatctcaaagggccgaggaggag
agccgcctcagggccctcttcactggccacatccggggccttctcgagtgcgcggcggtg
cggcggtgcgaggggaaaatcgagcaggtggacaatgagatcaagaaagtatcggggatg
ctcatgaagccgaatcggctggccagctttgggaagatgcaggacactaggaggagtctg
gaggcggagaaggagcagttggagagcaggttggtggagttcagggccgccatggagtgt
cttattgcttacctcagtgagcagcaggaggtctgtgaggaggaggaggggaaatttgag
atttttaagcttcagggtgaattagattggagcaggatccaccatttgatggaaagggaa
tgccggcggtttgaggatgggttgcccctgtatgcttgcagaaggaaaattcttagtcac
gtattctccaatcaggttttggttttgattggggagactggttctggaaagagtacccag
ttggcccaatatcttgccgatgcaggactagctgctgatggatcaattttgtgtactcag
cctcgaaaaattgcagccatatctttggcacaaagggttggggaggaaagctatgggtgc
tatgcagataacttcgtggtttctcatcccacctattcatcctctaaggagttcaattct
cggctaatgtttatgactgacaactgtctcctgcaacattgcatgaatgatatgagtttg
tctggtatatcatatatcattgtagatgaagctcatgaaagaagcttgaacactgatctt
cttttggcattgattaagaagaaactgcttgagaggttagatttacggcttataataatg
tccgcaactgctgatgcaggcaaacttgctgaatatttctatggttgctacaccctgtat
gtcatggggaggaacttccctgtcgaaataaaatatattcctgatatatctgtcaacact
atctgtaccaccactttgacgcacacttctggtatttatgcttcctatgtttgtgatgta
ataaagatggtgcgcataattcacaagacagagggagatggttctatccttgcatttcta
acttctcaaatggaagtggaatgggcttgtgagaattttcatgatccctctgcagtggtg
ctgccaatgcatgggaaactttcttatgaagaacaaagtcgtgttttccaaaaatactca
ggaaagagaaaagttattttttccactaatgtagccgagacttctcttaccatccaagat
gttaagtatgtggttgattctgggatggtaaaggagagcaggtacgaacctggcaatggc
atgaacgtgctcaaggttggcaggataagtcaaagttctgctagtcaacgagctggccgt
gcaggacggacagcaccaggcaagtgttacaggctttactcagaatgtgatttctattca
atgaaaacacatcaggaacctgaaattcgcaaggttcaccttggaattgctgttctgaga
attcttgctttgggcagtaagaacatgcaggattttgagtttgttgatgctccaagtccg
caggcaattgacatggctatgcagaatcttatccagttgggtgctgttactaacaatgct
gatgtctttgaacttactgatactggccggtctttagtgaaattgggtattgaaccacgg
ctggggaaaattattcttgattgctttggctgtggtttgagaaaggagggccttgttctt
gctgctgtaatggcaaatgctagcagcatattttgtagagttggcagtgacgaggataaa
tataaagcagaccgtcttaaagttccattctgccaccgttatggagaccttttcacgctg
ctctctgtttacaagaaatgggaagataaacatgaaaataagagtaagtggtgttggcag
aatagcattaatgctaagtcaatgagaaggtgtcaggagactgtagtggaattggaaaag
tgtcttcaacatgaactcaacattatcattccaaattactggttatgggatccagatgag
cccactttccatgatcaaatattgaagaagattatactttcatcccttgcagagaatgta
gctatgtattctggatgtgatcgacttggttatgaggtggctctgacaggtcaacatgtg
caacttcatccatcaagttcattgctaatgtttagccagaaaccaaactgggtagttttt
ggggaaattttatcaatctcaaatcaatatttggtttgtgtaactgcagtggactctgaa
agcttgtgtgtgatccagcctcctttgtttgatattcaacagttggagagccggaggatg
cagatgaatgtgatcactggagttggcagtaatctgcttaaaaggttctgtggcaagcat
aatcaaaacctacagaggattatttcacatattcagaaagtttgcatggatgaccgcatt
ggtattgatgtcgactttggaaaaagtgaaattcaaatatttgcatcagcaaaagatatg
gagaaggcttgtagcattgtcaatgatgccttggagtatgaaacaaaatggttgagggat
gaatgtgtcgagaaatgcttatttcctggcaggcctggtagttctcccccggtggcactg
tttggctcaggtgctgaaattaagcatctagaacttgacaagagacatctaaccgtggaa
atatcccatccaaatgctcatgctatagatgataaggaagttcttttgatggttgaccaa
tgtgtgtctggaatagctaactatcataaatatgccgggaatggacaagagggaacagat
aaatggggcaagataacatttcttagtcctggggctgcagaaaatgctgttgccaagctg
aatgaggtagagtttcatggttccctgttgaaagctgttcctgtaagggcagttgacaat
aagatgcatccattttctgcagttagagccagagtttgttggccacggaggccaagcaaa
ggagttgcacttattacgtgtgctagaggggaggctgaattgattgtcagggactgcttt
gccttggtggttggaggtaggtatgtaaactgtcaggtcagcacaaaatacaaaaattgt
gtatttgtaacaggacttccaagagatgtatcgaaaccagaattatatgatgcttttttg
acttcaacaaagaggaaaatccttgacattcacttgttgagaggagaagcaatacccaac
cccccaggtgctacttgtgcagaagcacttgttagagaaatttctgcttttatgcctaaa
aagaattttcgtgaccatagtttccaggttgaagtgttcaaccctgaaccaaaggattat
atgatgaaagctttaatcacatttgatggcagccttcaccttgaggcagcaaaggctttg
gatcacattgaggggaaagtactgcctggttgtctctcatggcagacaatacagtgcgaa
catgtgtttcacagccatctatcttgtcccgctcgtgtctattttgttattaagaaacaa
ctggattctctacttgaaagcttccagcgacagaagggtgtgtcctatagtttggaaaag
aatgataatggttcttgtcgagtgaagatatctgccaatgccacaaaaactatcgcagat
ttgaggaggcctctggagcagttgatgaaaggcaagaccgtaagccatccaagcctcact
ccaactgtgcttcagctactcttgtcccgggatggcatggccctattgaaagctgtggag
cggaagtctggaactcacattctgtatgacaggcagaacctaaacgtcaaagtgtttgga
cccccaaaggaggttgctgcagctgagcagaatttggtgcaatcgctgctatccctccac
gaggacaggcaactcgaaatccgtcttcgaggtcgcaacctccccccanacttgatgaaa
gaagtggttcagagatttggaccagatcttcaggggctgaaggaaatggtgcctggggct
gagctgactctcaacacccgaagccacatcatcggtgttcaaggacacaacagtctgaag
caaaaggtggaagaggtgatctctgaggtggcactatctgtcgatcatggttggatggct
gagcagccgttggaaacctcttgccccatttgcctgtgtgagctgtgggagccttacagg
cttgaagcctgtgggcacgatttctgtcggagctgcttggtcgatcaactggagtccacc
atcaggtccagagatagcttccccatctgttgcaccaaggagggttgcaataagctcatc
ctgctcgtggacctgcggtctcttctgccatctcaaagaatggaagagcttttcagggcc
tctttaggggccttcgtggcttccaggagcgggtcctaccggttctgtccctcacccgac
tgcccgtctgtctatcaggttgccactcaggacgcacggggtggacattttgcttgtggg
gcttgcttggtggagacatgcaccaagtgccatcttgagtaccaccctttcatatcttgt
gggagatacaaggagtacaagaaggacccggacctgtcactagtggagtggcgcaagggg
aaggagaacataaaggactgccccgcctgtggttacacagttgagaaggtcgatggctgc
gaccacattgagtgcaagtgtgggagacacatctgttgggtgtgcttggagttcttcaaa
agcagtgatgagtgctatagtcaccttaggtctgagcaccagtactactaa

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