KEGG   Phoenix dactylifera (date palm): 103702323
Entry
103702323         CDS       T03274                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA topoisomerase 1 alpha-like
  KO
K03163  DNA topoisomerase I [EC:5.6.2.1]
Organism
pda  Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:pda00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pda03032]
    103702323
Enzymes [BR:pda01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     103702323
DNA replication proteins [BR:pda03032]
 Eukaryotic type
  DNA Topoisomerases
   103702323
SSDB
Motif
Pfam: Topoisom_I_N Topoisom_I Topo_C_assoc RodZ_C DUF896
Other DBs
NCBI-GeneID: 103702323
NCBI-ProteinID: XP_008782916
UniProt: A0A8B7BPT7
Position
7:complement(3958385..3971462)
AA seq 949 aa
MAVHSCIKQVIYDDGDDDDGPAVFKRSNSASKQKQLNSASKKSTSQRCDSSLGKLRSEKS
VTNYGNSNFQKNKITSTVKAASEKSESMVAGSNSRIADQSKHFAEHKLASNSKETAHLDN
ICADAESSDDSDDDKPLSHRLNAASMVFHRNNSMHADSSEHKLATSSKDKMDLDKPCNKS
EDSDDSDDDKPLSSKFSSSVVVEKSSSSHAKKVFESPRHTSLSSQKLKERTKEDSDDSED
DEPLLSRFQPKSAGGASTKISDDDEKPLASKVKPNGSVKKGTSNELRFSKGANKRPLGDT
NNRIDSSIKKAKVSDSSYHAKVKQEVVEKKPGTDDNDHIPIAQRIKSGSSDNKSSTNKVM
KKITCSPFKKDSKKMKKAMKNSKFSKSLKVPPGSGGGQKWTTLEHNGVIFPPPYKPHGVR
MLYNGQPVDLTPEQEEVATMFAVMKDTDYATKPKFIENFWNDWKQILGKNHVIKKFELCD
FTPIYEWHQRQKEKNKQMSAEEKKALKEDKLKQEEKYMWAVVDGVKEKVGNFRVEPPGLF
RGRGEHPKMGKLKKRIRPSDITINIGKGAPIPECPIPGERWKEVKHDNTVTWLAFWNDPI
NLKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIHNIRANYTRDFTSKDAAKRQIAVAT
YLIDKLALRAGNEKDDDEADTVGCCTLKVENVVLVPPNKLQFDFLGKDSIRYFNTVEVEP
PVYKAIGEFRTARKSHGSKKSGGDDLFDLLDTSKLNAHLKELMPGLTAKVFRTYNASITL
DDILNRETKDGTLPEKIAVYQHANKEVAIICNHQRSVSKSHDAQMSRLNGKIADIKAQRE
ELKVDLSRARKGKPPLKDGEGKPKRIMSPQVLEKKVAQIDAKIEKMELDKKIKEDLKTVA
LGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPTFRF
NT seq 2850 nt   +upstreamnt  +downstreamnt
atggctgttcatagttgcatcaaacaagttatctatgatgatggtgatgatgatgatggg
cctgcagtttttaaaagatcaaactctgcatccaagcaaaaacagttaaattctgcttcg
aagaaatcaacatctcaaagatgtgatagttctttgggaaagcttagatctgagaaaagt
gttacgaattatgggaattccaattttcagaagaataagataacttctactgtgaaggca
gcaagcgagaagtctgagtctatggttgcaggctcaaattctaggattgccgatcagtca
aaacattttgcagaacataaactggcaagtaatagtaaggaaacagcgcatctggataat
atttgtgctgatgctgaaagctcagatgattcagatgatgacaaaccattaagccatagg
cttaatgcagcttctatggtatttcataggaacaattcgatgcatgcggattcttctgaa
cataaattggcaactagcagtaaggataagatggatttggataagccatgtaataaaagt
gaggactccgatgattctgatgatgataagccattaagctccaaattttcttcatcagtg
gttgttgagaaaagcagctcctcgcatgccaagaaagtgtttgagtcccccaggcatact
tcactatcatcacaaaagttaaaagaaaggaccaaggaagattctgatgattcagaagat
gatgaaccattgctctccaggtttcaaccaaaatccgctggtggtgcatctacaaaaatt
tctgatgatgatgagaagcctttggcttctaaagttaagcctaatggttctgtcaagaag
ggaacaagtaatgagttaaggttttcaaagggtgcaaacaagcgtcctcttggtgatacc
aataatcgtatagattcttcaattaaaaaggcaaaagtctcagattcctcttaccatgca
aaagttaaacaagaagttgtagagaaaaaaccaggtacagatgataatgaccacatacca
attgcacaaagaataaaatcagggtcatcagacaacaaatcatccactaataaagtgatg
aagaagatcacttgttcgccattcaagaaggatagcaagaaaatgaagaaagcaatgaag
aattcgaaattctcaaagtccctgaaggtgcctcctggatctggtgggggccagaaatgg
actactttggagcacaatggtgtcatttttcctccaccttacaagcctcatggggtcaga
atgctctacaacggacagccagttgatttgactcctgaacaagaggaggttgcgacaatg
tttgcagttatgaaggacacagattatgccaccaagcctaaatttattgagaacttttgg
aatgactggaaacaaatactgggtaaaaatcatgtcattaaaaaatttgagctctgtgat
tttaccccgatctatgaatggcatcagagacaaaaggagaagaacaaacagatgagtgct
gaggagaagaaggccttaaaagaagacaaattgaagcaagaggagaaatacatgtgggct
gttgttgatggtgttaaagagaaggttgggaatttcagagttgaaccaccaggattgttc
cgaggccgtggagagcatccgaagatgggaaagctgaaaaaacgcattcggccaagtgac
attacgatcaatattggtaaaggtgcaccaattccagaatgtccgatacctggtgaaagg
tggaaagaagtaaaacatgataatactgttacatggctagcattttggaatgatccaata
aatctgaaagagtttaaatatgtatttttggcggcaagcagctcattgaaggggcaaagt
gacaaggaaaaatatgagaaagccagactgttgaaagattacattcataatattcgtgca
aattatacaagggattttactagtaaagatgctgcaaaacggcaaatagcagtggccaca
taccttattgataagctagcacttagggcaggcaatgaaaaggatgatgatgaggctgat
actgtaggttgctgcactttgaaagtggagaacgttgttttggtccctccaaataagttg
cagttcgacttccttggtaaagattctatcagatatttcaatactgtggaggttgagcca
cctgtctataaagctattggagaattccggactgcaagaaaaagtcatggtagtaagaaa
agtggtggagatgatctctttgacttgctggatacgagcaagcttaatgctcatctgaag
gaactcatgcctggtcttactgcgaaagtttttcgtacatacaatgcttctattactttg
gatgacattttgaatagggaaaccaaggatggtactcttccagaaaaaattgctgtttat
cagcatgcaaacaaagaggttgcaatcatatgtaatcatcaacgcagtgtctccaagtct
catgatgcccagatgtcaagactgaatggaaagatagcagacataaaggcccaaagagag
gagctgaaggtggatttgagtagagcaaggaaaggaaagcccccacttaaagatggagaa
gggaagccaaagaggatcatgtcccctcaagtgttagagaagaaggttgctcagattgat
gcaaagatagagaaaatggaattggacaaaaaaataaaagaagatttgaagacagtggct
ttgggtacatcaaagataaactaccttgatcctaggatatcggttgcatggtgcaagcgc
catgaagttccgattgagaagatatttaacaagtcactacttgccaaatttgcttgggca
atggatgtcgaccccaccttcagattctaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (39)   

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