KEGG   Phoenix dactylifera (date palm): 103707094
Entry
103707094         CDS       T03274                                 
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB1-1-like isoform X1
  KO
K03141  transcription initiation factor TFIIH subunit 1
Organism
pda  Phoenix dactylifera (date palm)
Pathway
pda03022  Basal transcription factors
pda03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pda00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    103707094
  09124 Replication and repair
   03420 Nucleotide excision repair
    103707094
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pda03021]
    103707094
   03400 DNA repair and recombination proteins [BR:pda03400]
    103707094
Transcription machinery [BR:pda03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     103707094
DNA repair and recombination proteins [BR:pda03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     103707094
SSDB
Motif
Pfam: BSD PH_TFIIH
Other DBs
NCBI-GeneID: 103707094
NCBI-ProteinID: XP_008789678
UniProt: A0A8B7C1N2
Position
7:complement(5844678..5868985)
AA seq 607 aa
MAVINMAAKYKTTVKEPGIPGVLKMSEEKIIFIPNDPRSAMKLNVDFRSIKGHKFSKDGS
KQALLNLTQDSEKGGGYIFEFDKFSDRNVCRDFVGKVLGKFQAMMSSKQNEQPVPEKPAA
TMHGEQLSTTEMEHRMKLLREDSELQKLHKQFVIGGVLTESEFWATRKSLLDDDAQRTSK
QQAGFKSAMLADVRPSTDGRTNKVTFSLTPEIIHQIFAEKPAVHWAFLNFVPSKMTEKDF
WTKYCRAEYLHRTKNSVVAAAEAAEDEELAVFLKNDDILANEARRKIRRVDPTLDMEADL
GDDYIHLPDHGILRDGSKETVDAENDIARRTLSQDLNRHAAVVLEGRALDVELGDTRTVA
EALARSKQAESSAETSDEKTNQERLKRVSRMTEIEDLQAPHSLPYAPLCIKDPREYFDSQ
QANALKALGDTDARIKPIDCSLSTEEAYIYLMEQISEVKVRGLNNPVVQPEAALKVLNGL
NQYLSSTKYHLGKNPQESVLDRLPNRTKDELMHHWTSIQELLRHFWSSYPITTTYLYNKV
LRLKDAMTQIYHKLQETKESVQSDFRHQVSRLVQPMLQALDAAFAHYDTEQQKQYNKGVS
KPNGFVQ
NT seq 1824 nt   +upstreamnt  +downstreamnt
atggcggtgatcaacatggcggcgaaatataaaacaacggtcaaagagcctgggattcca
ggagtgctcaagatgtctgaggaaaaaattatattcattccaaacgatcctaggtcagca
atgaagcttaatgtggattttagaagcattaaaggtcacaagttcagcaaagatggttcc
aaacaagcattgttaaatcttacacaagattctgagaagggtggaggctacatttttgag
tttgacaaattttctgaccgcaatgtttgccgagattttgtaggaaaagttctagggaag
tttcaggctatgatgtcctctaaacagaatgaacaaccagtgcctgaaaaacctgctgct
acaatgcatggtgaacaactcagcaccacagagatggagcaccgaatgaagttgttgaga
gaggatagtgaattgcagaaactacacaagcagtttgtcattggtggtgtgttaacggaa
tctgagttttgggcaacaagaaagagtttacttgatgatgatgcgcagagaacatcaaag
cagcaagcaggattcaaaagtgctatgcttgcagatgttaggccatcgactgatggtcgg
accaacaaagtcacctttagccttaccccagagatcattcaccagatttttgctgaaaag
cctgctgttcattgggcatttctgaatttcgtcccaagcaaaatgacagaaaaggatttc
tggacaaaatattgtagagcagaataccttcacaggacaaaaaattctgtggttgctgca
gcagaagcagctgaggatgaggaacttgctgtatttctaaagaatgatgacatattggcc
aatgaagcccgccgtaagattagacgggtcgatccaacactagatatggaagctgattta
ggggatgactacattcatcttcctgatcatggaattcttcgggatggtagtaaggagact
gttgatgctgagaatgacatagctaggaggaccctctcacaggatcttaatcgacatgca
gctgttgttcttgaaggaagggcattagatgtggagttgggagacacacggacagtagct
gaagcacttgcaaggtctaaacaggcagagtcgtctgctgaaacctcagatgagaagaca
aaccaagaacgattgaagagggtttctcgaatgactgagattgaggatctccaggctccc
catagcctcccatatgcaccactctgcatcaaggatccacgggagtactttgattcacaa
caagccaatgctctcaaagctttaggagatactgacgctagaatcaaacccattgattgc
agcctaagcactgaggaggcatacatttatttgatggagcagatttctgaggtgaaagtc
cgagggttgaataatccagttgttcaacctgaagcagctctcaaggttcttaatgggttg
aatcagtatctttcaagtaccaaatatcatcttggaaagaaccctcaggagagtgtcctg
gacaggctgccaaacaggactaaagatgaacttatgcatcactggacatcaattcaggag
ttgctacggcatttctggtcatcatatcctattacaaccacatacctttataataaggtt
ttaagattgaaggatgctatgacacagatctatcataagctacaggagacaaaggaatct
gttcagtcagatttccggcatcaagtttctcgccttgttcagcccatgctccaggccttg
gatgctgcctttgctcactatgacacagaacagcagaagcagtataataaaggtgtcagt
aaaccaaatggatttgtccaataa

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