KEGG   Phoenix dactylifera (date palm): 103711812
Entry
103711812         CDS       T03274                                 
Name
(RefSeq) replication factor C subunit 3-like
  KO
K10756  replication factor C subunit 3/5
Organism
pda  Phoenix dactylifera (date palm)
Pathway
pda03030  DNA replication
pda03410  Base excision repair
pda03420  Nucleotide excision repair
pda03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pda00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    103711812
   03410 Base excision repair
    103711812
   03420 Nucleotide excision repair
    103711812
   03430 Mismatch repair
    103711812
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pda03032]
    103711812
   03036 Chromosome and associated proteins [BR:pda03036]
    103711812
   03400 DNA repair and recombination proteins [BR:pda03400]
    103711812
DNA replication proteins [BR:pda03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    103711812
  DNA Replication Termination Factors
   ELG1-RFC complex
    103711812
Chromosome and associated proteins [BR:pda03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    103711812
DNA repair and recombination proteins [BR:pda03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     103711812
  Check point factors
   HRAD17(Rad24)-RFC complex
    103711812
SSDB
Motif
Pfam: AAA_22 Rad17 AAA_11 RuvB_N T2SSE
Other DBs
NCBI-GeneID: 103711812
NCBI-ProteinID: XP_017699450
UniProt: A0A8B7MUY9
Position
2:6344222..6351314
AA seq 639 aa
MPPPPMSSHRPLRRSSTKSSVPSSSYAAAARLRPRLQRPRPSSTTLSSALTKERLRDHAC
CASWSTTSSYACNKGLALSPGRESLDSSSRSSSSSSSILVKIHRWGTSWLCSRRLRPSAA
SVPAPPKTLPPYPRCESWDPGLRSPPEHWMPRRSSSPPPAVYPVEKPLRESERVPAQPAP
ATTMIDRPIPAAADAIGTVGSRKDRKSTVVISAPATTMIARPIPAADDAIGTVGSRKERE
STVVISASSPKEDRFVWAQKYRPKALKEFICNRNRAEELLQMVSKQICSHFIVEGPPGAG
KKTMVLAYLRDAFGPEKLKTNNELKKIELKGEFVSSININVRMSFQHVEVNLSDLHGYEK
HVLASFINDPCTRSDKAVHCDHSNCRALVIHEADKLSTDAQHYLLWLMEKYKGCNKIFFC
CSDASKLHIMRHLCKTVKLLPPSDSEIVEVLEFIATQECIDLPHALAKRIAENSKHNLRQ
AIRSFEASWKSNYSLKENQEILTGWEEDIAEIAKNIVEEQGPMQLYVIRGKLKNLIEHDV
SPDFIFSTLITEMKKHLDDQFQAKIDAWYRDFNNRDNGLMLDAVKSQTFGHDKLESSGSK
LNYPKKNVRRFMSIEEFTAKFMSFYKSAATKNNGGPNPC
NT seq 1920 nt   +upstreamnt  +downstreamnt
atgccccctccccccatgtcgagccaccgccccctccgccgctcctccaccaagtcctcc
gtcccctcctcctcctacgccgccgccgctcggctgaggccccgactccagcgccccagg
ccctcctccacgaccctctcctccgccctgaccaaggagcgcctccgcgaccacgcctgc
tgcgcctcctggagcaccaccagcagctacgcttgcaacaagggcctcgcactcagccct
ggccgcgagagccttgactcctcctcccgctcctcctcctcctcttcctccattctcgtt
aagatccaccggtggggaacgtcctggttatgctcccgccgactccgcccttccgccgcc
tccgtgccggccccgccgaagaccctgccgccctatccccgctgcgagtcctgggatccc
ggattgcggtcgccacccgaacattggatgccgaggaggagttccagccctccgcccgcg
gtctacccagtggagaagcctttgagggagagcgaacgggtcccggcccagccggcgccg
gccactactatgatcgaccggccgattccggctgctgctgacgcgattggcaccgttgga
tcaaggaaggatcggaaatcgacggttgtaatcagcgccccggctactactatgatcgcc
cggccgattccggccgctgatgatgcgatcggcaccgttggatcaaggaaggagcgggaa
tcgacggttgtaatcagcgcttcatcgccgaaggaggacaggttcgtttgggcgcaaaag
taccggccgaaagctttgaaggagttcatctgcaacaggaatcgggccgaggagctcctc
cagatggtgtctaagcaaatatgcagtcattttatagtggaaggtcctccaggggcgggg
aagaaaactatggttttggcatatttaagagatgcttttggacctgagaagttgaagaca
aataatgagctgaagaaaattgagctgaagggtgaatttgtctccagcattaacataaat
gtgaggatgtcttttcaacatgttgaggtaaatctgtctgatttgcatgggtacgagaag
catgtcctagcatcttttataaatgatccctgtacacgatcagacaaagctgtacattgt
gatcatagtaattgcagagcgcttgttatccatgaggctgacaagctatcaacagacgct
caacattatcttctttggcttatggagaagtacaaaggttgtaacaagatcttcttctgc
tgctctgatgcctcaaagcttcacatcatgaggcatctttgcaagactgtaaaacttctg
ccaccttcagatagtgagattgtcgaagttttggagttcattgccacgcaagaatgcata
gatttaccccatgccctggcgaagaggattgcagagaactcaaagcataatcttcgacag
gcaattcgttcatttgaagcctcctggaagtcaaactattctttaaaagaaaatcaggag
atcttaactggatgggaagaagatattgctgagatagccaaaaatattgttgaagagcaa
ggcccaatgcaattatacgtcatccgtgggaagctcaagaatctaattgagcatgatgta
tcaccagactttattttcagtactctgataacagagatgaagaagcatctggatgaccaa
tttcaagccaaaattgatgcctggtatcgagattttaacaatcgggataatgggctaatg
ctggatgctgtcaaatcccaaacttttggacatgataaattagagtcgtctggcagtaag
ctaaattatccaaagaagaatgttcgccgtttcatgagcatcgaagaatttactgcaaag
tttatgagcttctacaagtccgctgccaccaagaacaatggagggccaaatccatgctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (34)   

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