KEGG   Phoenix dactylifera (date palm): 103714650
Entry
103714650         CDS       T03274                                 
Name
(RefSeq) flowering time control protein FY
  KO
K15542  polyadenylation factor subunit 2
Organism
pda  Phoenix dactylifera (date palm)
Pathway
pda03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pda00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    103714650
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pda03019]
    103714650
Messenger RNA biogenesis [BR:pda03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     103714650
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 eIF2A NBCH_WD40 Pep3_Vps18 WD40_like WDR54 Nucleoporin_N
Other DBs
NCBI-GeneID: 103714650
NCBI-ProteinID: XP_008800196
UniProt: A0A8B7CJ28
Position
13:complement(3414273..3433771)
AA seq 716 aa
MMYGEQQSGGDFPRGPPMRQPSASSTNLAPEYPHHPPPYEAHGDSFAAKRMRKLVQRRAV
DYTSTVVRYMQVRMWQRDVRDRTVLQPTPAAVLDMLPTVAYADNPSTSFAAKFVHASTNK
NRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNENWMV
TGDDGGSIKYWQNNMNNVKANKSAHKESIRDLSFSRTDLKFCSCSDDTTVKVWDFARCQE
ERSLTGHGWDVKSVDWHPTKSLLVSGGKDNLVKLWDAKTGRELCSFHGHKNTVLCVKWNQ
NGNWVLTASKDQIIKLYDIRSMKELESFRGHSKDVTALAWHPFHEEYFVSGSFDGSIFHW
LVGHETPQIEIPGAHDNSVWDLAWHPIGYLLCSGSNDHTTKFWCRNRPGDTSRDKYSIGH
CDQNAILAGRTISGFPVPEPPQTPGPFAPGLSRNEGTIPGIGVAMPLSVPSLDGSDQGEQ
RQPIPGILPSGAPPLPPGPHPSLLASGQQQAFQQIPQQGPPQQQQQVSFSQQMVSLPLPP
PNLPQLPPQSHLPFLQHPHGPRPPPLQLPPLGSIPSSMPGSMPMPSSMAPSLPLPLPNPM
LMQGSGNQMLSPMPQGSMMGLNQMHSGPVTTSNIPPVGGFANGINIQGATNAAGLQNFPL
GGMFNRPQVGQIGPIPGLNAYQPGMMDVRVPGMALGGNMGLPPPPPPPLPHGSAPQ
NT seq 2151 nt   +upstreamnt  +downstreamnt
atgatgtacggggagcagcagtcgggcggggatttccctagagggccgcccatgcgtcaa
ccctcggcgtcttctactaatctcgctcccgagtacccccaccatccgcccccctacgaa
gcccatggagacagttttgccgctaaaagaatgcgaaagcttgttcaacggcgtgctgtg
gactacaccagcacagttgttcgatatatgcaggttcgtatgtggcagcgggatgtgagg
gacagaactgtgttacaacctactccagctgcagtcttggatatgttacccacagttgca
tatgctgataatccatcaacaagctttgctgcaaaatttgttcatgcctctacaaacaaa
aacagatgttcaattaatcgagtcttgtggacccctacagggcggcgtcttataaccggg
tcacaaagtggcgaatttactctttggaatggacaatcttttaactttgaaatgatcctt
caggctcatgatcatgctattaggtccatggtttggagtcacaatgagaattggatggtc
actggtgatgatgggggttcaatcaagtattggcaaaataacatgaacaatgtcaaggca
aataaatctgcccataaagaatcaatccgggacttaagtttttctagaacagatttaaaa
ttctgttcctgctctgatgacactactgttaaggtctgggattttgcaaggtgccaagag
gagagatccttaactggccatggttgggatgtcaagagtgttgattggcatccaacaaaa
tctttactggtttcaggtggcaaagacaatcttgtgaaactatgggatgcaaaaacagga
agagagctctgttcattccatggtcacaaaaatacagtactttgtgtcaaatggaatcaa
aatggcaactgggtgctgactgcttctaaagatcagataattaagctttatgatattaga
tccatgaaagagcttgaatcatttcgtggacacagcaaggatgtgactgctctggcatgg
catccatttcacgaagaatactttgtcagtgggagttttgatggatccatctttcattgg
cttgttgggcatgaaactcctcagattgaaattcctggtgcacatgataacagtgtttgg
gatctagcttggcatcccattggctatttactttgcagtggtagcaatgatcacacaaca
aagttttggtgcagaaacaggcctggagatactagtcgtgataaatatagtattggtcat
tgtgatcaaaatgctatccttgctggtcgtacaataagtggtttcccagtaccagaacct
ccacaaactccaggaccatttgctcctggattgtcgcgaaatgaaggaactattcctggt
attggagttgcaatgccactctctgttccatctcttgatgggtcagatcaaggagagcag
aggcagcctattccgggtattcttcctagtggtgcacctcctcttccaccaggtccccat
ccatcccttttggcatccgggcagcaacaagcatttcagcaaattccccagcaaggccca
cctcaacagcagcaacaagtgtcattttcacagcaaatggtttcactgccacttcctcca
ccgaacctgcctcagctaccgccgcaatcacatttgccatttcttcagcatcctcatgga
cctcgccctccgcctctgcagcttcctcctcttggatccattccctcatcaatgccaggc
tccatgcccatgccttcgtcaatggctccatcattgcccctacctttgcctaatccaatg
ctgatgcaaggttcaggaaatcagatgctctccccaatgccacaaggaagcatgatgggc
cttaatcagatgcactcagggcctgttactaccagcaatattcctcctgtgggaggtttt
gcaaatgggataaatattcagggtgcaacgaatgcagctgggctacaaaattttccgctt
ggtggcatgtttaaccggccacaagttgggcaaatagggccaattccaggattaaatgct
tatcagcctggaatgatggatgttcgggttcctggcatggctctaggaggcaatatgggg
cttccaccaccaccaccaccaccacttcctcatggatcagcaccccaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (45)   

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