KEGG   Phoenix dactylifera (date palm): 103720177
Entry
103720177         CDS       T03274                                 
Name
(RefSeq) chaperonin CPN60-like 2, mitochondrial isoform X1
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
pda  Phoenix dactylifera (date palm)
Pathway
pda03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pda00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103720177
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pda03019]
    103720177
   03110 Chaperones and folding catalysts [BR:pda03110]
    103720177
   03029 Mitochondrial biogenesis [BR:pda03029]
    103720177
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pda04147]
    103720177
Enzymes [BR:pda01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     103720177
Messenger RNA biogenesis [BR:pda03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     103720177
Chaperones and folding catalysts [BR:pda03110]
 Heat shock proteins
  HSP60 / Chaperonin
   103720177
Mitochondrial biogenesis [BR:pda03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    103720177
Exosome [BR:pda04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   103720177
  Exosomal proteins of other body fluids (saliva and urine)
   103720177
  Exosomal proteins of breast cancer cells
   103720177
  Exosomal proteins of colorectal cancer cells
   103720177
  Exosomal proteins of bladder cancer cells
   103720177
SSDB
Motif
Pfam: Cpn60_TCP1 Flavoprotein
Other DBs
NCBI-GeneID: 103720177
NCBI-ProteinID: XP_008807997
UniProt: A0A8B7CWP8
Position
11:2679355..2689690
AA seq 576 aa
MYRAAAAIASSMIRVSSPKTQIWSGRILSARSYAAKDIDFGVGARAAILQGVHELAEAVK
VTMGPKGRNVVIEKSRGDPKVTKDGVTVAKSIEFKERAKNVGANLVKQVAKATNTAAGDG
TTCATVLTQAILTEGCKAVASGVNVMDLRNGINMAVDAVISHLRSKAWMISTPEEITQVA
TISANNEREIGELIARAMEKVGKEGIITVTDGNTLYNELEVVEGMKLARGYISPYFITDE
KTQKCELENPLILIHDKKISDMNSLVRILELALKKNRSLLIVAEDVESDALAMLVLNKHR
AGVKVCAIKAPGFGENRRANLEDLAILTGGEVITEDHGWNLEKVQLEMLGTAKKVTVSLD
DTIVLHGGGDKKLIEERCEQLRTAIEKSTAMFDKEKAQERLSKLSGGVAVLKIGGASEAE
VGERKDKVTDALNASRAAVEEGIVPGGGVALLYATRELDRIQTSNGNEKIGVQIIKNALK
APTFTIATNAGVDGAVIIGKLLEQENLNLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDA
ASVSVLLTTTEAAVVELAEAKRPRASRMPEMDDMDY
NT seq 1731 nt   +upstreamnt  +downstreamnt
atgtatcgggcggcagctgcgatcgcttcttccatgatcagagtttcttcccccaagaca
cagatctggagcggtaggattctatctgcaaggagctatgctgccaaggacattgatttc
ggggtcggagctcgggctgccatcctgcagggcgttcatgagctcgccgaggccgtcaag
gtcaccatgggtcccaagggtcgcaacgtagttattgagaaaagccgtggagatcccaaa
gtcacaaaagatggtgtgacagttgcaaaaagtattgagtttaaggaaagggcaaaaaat
gtgggtgcgaatcttgtcaagcaagttgcgaaagctactaacactgctgcaggagatggt
acgacctgcgcaactgttctaactcaagcaatactcactgaaggttgtaaggctgtggca
tctggagttaatgttatggacttgcgcaatggtataaatatggctgtagatgctgttata
tctcatttaagaagtaaagcctggatgattagtactcctgaagaaataactcaggtagct
accatttctgcaaataatgaaagagagattggggagttgattgctagagcaatggagaaa
gttgggaaagaagggattatcactgtcactgatggaaatacattatacaatgagctcgaa
gtggtggagggaatgaaattagccaggggttatatatctccctatttcatcactgatgag
aagacccaaaaatgtgaactagaaaatccactgatccttatccatgataagaagatctca
gacatgaattctctcgtccgaatattggagcttgctctaaagaaaaatagatcccttcta
attgtggcagaggatgtagaaagcgatgctctagcaatgctggtactaaataagcatcgt
gctggagtcaaggtttgtgccataaaagctcctggttttggggaaaacagaagagcaaat
ctggaggatcttgccatacttacaggaggagaggttattactgaagatcatggttggaac
cttgagaaagtccaattagagatgcttggtactgctaagaaggtcactgtctctcttgac
gatactattgttctacatggtggtggtgacaagaagctaattgaagaaaggtgtgagcag
cttagaacggccattgagaagagtacagccatgtttgacaaggagaaagcacaagaaaga
ttatccaagctatctggaggtgttgctgttctcaagattggtggagctagtgaggctgaa
gttggcgagagaaaggataaagtaactgacgctctgaatgcttcacgagctgctgtggaa
gagggtattgtgccaggtggtggagttgcccttttatatgcgacgagggagttggacaga
attcaaacttctaatggcaatgagaagataggagttcaaatcatcaaaaatgctctaaag
gcacctacattcactattgctacaaatgctggtgttgatggtgctgtaattattggcaaa
ctacttgaacaagagaatcttaatttgggctatgatgctgccaaaggtgaatatgttgac
atggtgaagtctggaattatcgatcctctaaaagtcataagaactgctctggtagatgct
gctagcgtctcagtattgttgacaaccactgaagcagcagtcgtggagcttgctgaagca
aaacgcccacgagcaagtcgcatgccagaaatggatgatatggattattga

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (30)   

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