KEGG   Pasteurella dagmatis: 4362423_01169
Entry
4362423_01169     CDS       T05467                                 
Symbol
rnb
Name
(GenBank) exoribonuclease II
  KO
K01147  exoribonuclease II [EC:3.1.13.1]
Organism
pdag  Pasteurella dagmatis
Brite
KEGG Orthology (KO) [BR:pdag00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pdag03016]
    4362423_01169 (rnb)
Enzymes [BR:pdag01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     4362423_01169 (rnb)
Transfer RNA biogenesis [BR:pdag03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    4362423_01169 (rnb)
SSDB
Motif
Pfam: RNB OB_RNB S1 CSD2 DUF2274
Other DBs
NCBI-ProteinID: SNV70442
Position
1:1241152..1243131
AA seq 659 aa
MFQNNPLLSQLKQQIRESKQQVEGIVKSSDKAFGFLECDKKSYFIPPAAMKKVMHGDKIK
ALIEVVGDKEQAEPDELIEPMLTRFIARVRFNKDKKLQVLVDHPQINQPIGASQHKSVQE
ELQEGDWVVATLKTHPLRDDRFFFAQIQQFICKADDELAPWWVTLARHEQSRYPVKGLDS
YEMQDQQTREDLTALHFVTIDSETTKDMDDALYIEAIQQDEQQTGWRLVVAIADPTAYIA
LDSQIEKEAKQRCFTNYLPGFNIPMLPPELSDDLCSLMKDKVRPALVCYIETDLAGNITA
KPHFVSAYVQSKSKLVYDRISDYLENKANTWQPENEQEKQQINLLHQFTLARIEWRKQHS
LLFKERPDYSFILAENGKVQEIKAEYRRIANQIVEECMIIANICAAQYLDEHAKCGIFNT
HLGFDKKSLENVQQFLLVNLANEETQAELTERYSSENLATLAGYCQMRHDIEVIEGNYLE
LRLRRFLTFAEFKAELAPHFGLGLTGYATWTSPIRKYSDMVNHRLIKATLTNSECEKPQD
EVLARLQEARRQNRLVERDIADWLYCRYLADKVEQKTTFKAEIQDVMRSGLRVQLAENGA
SVFIPSSQLHNNKDEMQANADELAMYIKGEVAYKIGDIIDVQLLEVKEETRSIIGTVIQ
NT seq 1980 nt   +upstreamnt  +downstreamnt
atgttccaaaataatcctcttctttctcaattaaaacagcaaatcagagagagcaaacaa
caagtcgaaggtatagtaaaaagttcagataaagcattcggttttctcgaatgtgataag
aaaagctactttatcccccctgcagcaatgaaaaaagtgatgcacggtgacaaaatcaaa
gcacttatcgaagtggttggtgataaagaacaagcagaaccggacgaattaattgaacct
atgctcactcgctttattgcacgtgtacgctttaataaagacaaaaaattgcaagtactt
gttgatcatccacaaattaatcaacctattggcgcgtcacaacacaaatccgtacaagaa
gaattacaagaaggcgattgggtagttgcgaccttaaaaacacacccgctacgcgacgat
cgttttttctttgctcaaattcaacaatttatttgtaaagcggatgatgaactagcgcct
tggtgggttactttagctcgtcacgagcaatcacgttacccagtgaagggattagatagt
tacgaaatgcaagatcagcaaactcgtgaagatttgaccgcacttcacttcgtcactatt
gactctgaaacaacaaaagatatggacgacgcgttatatattgaagcaatccaacaagat
gaacaacaaacaggctggcgcttagtcgtcgcgattgcggacccaacggcatacattgcg
ttagattcgcaaattgagaaagaagcaaaacaacgttgtttcaccaactatttacccggt
ttcaatatcccaatgctgccacctgaattgtctgacgatctttgctcattaatgaaagat
aaggttcgtcctgcattagtttgttatattgaaacagatttggctggtaacataaccgca
aaaccacatttcgtgtccgcctacgtacaatcgaaatccaaattagtgtacgacagaatt
tctgattatttagaaaataaagcaaatacttggcaaccagaaaatgaacaagaaaaacag
caaattaatttgttgcatcagtttacactagcacgtattgaatggcgtaaacaacattct
ttattatttaaagaaagaccagattattctttcatcttagctgaaaatggcaaagtgcaa
gagataaaagcagaataccgccgtattgctaaccaaattgtggaagaatgtatgatcatt
gccaatatttgtgcagcacaatatttagatgagcatgcaaagtgcggtatttttaataca
catttaggctttgataaaaaatcattggaaaacgtacaacagtttttattagtaaattta
gcaaatgaagaaactcaagcagagttaacagaacggtattctagtgaaaatctagcgaca
ttagcaggatactgccaaatgcgccacgatatcgaagtgatagaaggcaattatttagaa
ttacgtttacgtcgtttcttaacctttgctgaatttaaagcagaattagcaccgcacttt
ggcttaggcttaacaggttatgcaacttggacttcaccaattcgtaagtattcagatatg
gtaaaccatcgcttaatcaaagccacattaaccaacagtgaatgtgaaaagccacaagat
gaagtgctcgctcgtttacaagaagcgcgtcgccagaaccgcttggtggaacgtgatatt
gctgattggctatattgccgttacttagcagataaagtcgagcaaaaaacaacttttaaa
gcggaaattcaagatgtaatgcgtagtggcttgcgtgttcaattagcagaaaatggcgca
tctgtctttattccgtcctcacaactacataataataaagacgaaatgcaagcaaacgca
gatgaacttgcaatgtacatcaaaggcgaagtagcttataagattggtgatatcatcgat
gtgcagttacttgaagtgaaagaagaaacgcgcagtattattggcacagtaatccaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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