KEGG   Pocillopora damicornis (lace coral): 113669958
Entry
113669958         CDS       T05773                                 
Name
(RefSeq) transcription initiation factor IIB-like
  KO
K03124  transcription initiation factor TFIIB
Organism
pdam  Pocillopora damicornis (lace coral)
Pathway
pdam03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:pdam00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    113669958
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pdam03021]
    113669958
Transcription machinery [BR:pdam03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     113669958
 Prokaryotic type
  Archaeal type
    TFB
     113669958
SSDB
Motif
Pfam: TFIIB TF_Zn_Ribbon Cyclin_N Cyclin_C RB_B HcyBio
Other DBs
NCBI-GeneID: 113669958
NCBI-ProteinID: XP_027041841
Position
Unknown
AA seq 310 aa
MASSSQTIKCSHHPEAPLIEDYRAGDMICSECGLVVGDRVVDVGSEWRTFSNEKATSDPS
RVGAAQNPLLGGGDLSTIIERVPVGNSETDGYSKYHNRGGLTGSDRSLMNAFREIGIMAD
RINLPRKIVDRANQLFKQVHEQKSLKGRSNDAIASACLYIACRQEGVPRTFKEICAISKI
SKKEIGRCFKLILKALETSVDLITTADFMSRFCSNLCLPLDVQKAATHIARRAVDLDLVP
GRSPISVAAAAIYMASQASETKKSQKEIGDIAGVADVTIRQSYRLIYLRAAELFPTDFHF
TTPVDKLPNL
NT seq 933 nt   +upstreamnt  +downstreamnt
atggctagtagctctcagacgataaaatgttctcatcatccagaggctccgttgatcgaa
gattatcgagcgggagatatgatttgctctgaatgcggtcttgttgtcggagatcgagtg
gttgatgttggctcagaatggcgaacatttagtaatgagaaggctaccagtgatccctct
cgtgttggagcagcacagaatccattattaggtggaggagatctgtcaacaatcattgaa
agagtcccagtgggaaacagtgaaacagatggatactccaaatatcacaatagaggcggg
ttgactggttcggacagaagtctcatgaatgcttttagagaaattggtatcatggctgac
aggataaatctacccaggaaaatagtggatcgggcaaatcaattgtttaaacaagttcat
gaacaaaagagtttaaaagggagaagtaatgatgccattgcttctgcttgtttgtacatt
gcctgtcgacaagagggtgtgcctaggacatttaaagaaatttgcgctatcagcaaaatt
tcgaaaaaggaaattggccgttgtttcaaactgatacttaaggccctggagacaagtgtg
gacctcataacaacagcagattttatgtcgaggttttgttccaatctttgtcttccactt
gacgtacaaaaggctgctacacatatcgcacggagggcggttgacttggatttagtgccg
ggtcgaagtcccatttcagtggcggctgctgcaatttacatggcgtctcaagcatctgag
acaaagaaatcacagaaagaaatcggtgacatcgctggtgtagcggacgttacgattcgt
caatcgtacagacttatctatctacgtgcagcagaactttttccgactgatttccatttt
actactcccgtggacaaacttccgaacctttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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