KEGG   Pocillopora damicornis (lace coral): 113670273
Entry
113670273         CDS       T05773                                 
Name
(RefSeq) aprataxin and PNK-like factor isoform X1
  KO
K13295  aprataxin and PNK-like factor [EC:3.1.-.-]
Organism
pdam  Pocillopora damicornis (lace coral)
Brite
KEGG Orthology (KO) [BR:pdam00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pdam03400]
    113670273
DNA repair and recombination proteins [BR:pdam03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     113670273
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     113670273
SSDB
Motif
Pfam: zf-CCHH FHA_2 FHA Yop-YscD_cpl
Other DBs
NCBI-GeneID: 113670273
NCBI-ProteinID: XP_027042189
Position
Unknown
AA seq 551 aa
MSSFYLRPLNGEKDIVVPFGKTTIGRGPLLGVTDKRVSRSHAVLEVKDENLTILPLHINP
TFLKSSDGKKFVSLKKGKTRVLIDGDVIALLPDSVCFMVVCQGDSLENGVTEEQVGISKN
KMLDKLLTKSNKAHDKEKPTKSSDTPTDMLLDEFMNTKPSLGTFSADAFTKHANVNFTSS
KPSNQDTITANSSFSVIEKDVIPPYRPLVEPAPLLQKTRKLPSWLIESTSQIKSPAKNSV
NRRGRTLVSQNVEKKTAADNKERNKITWREKLLAKEEQKVSGIDEDFTMGDDDESEHLKD
RGKNKFAKKRSSTSIEDNEEDVKPTESKKTRTSRILGNENDVYNEPSGPKSKKDICKTFS
GDTDTGGSDDEMSASKVERTQMKENEKESDKMKLPPCPYGKKCYRKNPLHFKEYLHPDKD
SSDDDDDKVAGDDSDDYRPVCPYGSSCYRQNPQHRKDFEHTDAVGPKHKTTKKRKNLDGT
SDDDGHNTYDYNDSFLADDASDVKEDGSSYSGSDDPDWQPVQGDDNGKEDVNQLLHEAKG
FLCNKKMTKPV
NT seq 1656 nt   +upstreamnt  +downstreamnt
atgtcttccttttacttaagacctctaaatggcgaaaaggacattgtggttccctttggc
aaaaccacgatcggaagaggtcctttacttggggtgacagacaaacgagtgtctagatcg
catgcagtactggaggtgaaagatgaaaatcttactattctgccccttcacatcaatcca
accttcttgaaatcttctgatggaaagaagtttgtaagtttgaagaaaggcaaaaccaga
gtcctgattgatggtgatgttattgcattgcttccagacagcgtgtgctttatggttgtt
tgtcagggagactcacttgagaatggtgtaacagaagaacaagtgggaatctccaagaat
aagatgttagataagcttcttactaagtcaaacaaggctcatgataaggaaaaacctaca
aaatcatcagacacacccacagatatgttgctggatgaattcatgaatactaagccttcc
ttaggaacattttctgctgatgcatttactaaacatgccaatgtgaacttcacaagcagt
aaaccatccaatcaagacacaattacagctaattcctccttctctgtgatagaaaaagat
gtgataccaccatacagaccattggtagagcctgcacctttgctgcaaaagacacgcaaa
ctaccctcatggttaatagagtcaacaagtcaaataaaatctcctgctaagaattcagtt
aacaggagagggagaactttggttagccaaaatgtagagaagaaaacagccgcagataac
aaagaaagaaacaaaatcacttggagggaaaaattgttagcgaaggaggaacagaaggtt
tcaggcatagatgaggattttaccatgggggatgatgatgaatctgagcatttgaaggat
agaggaaagaacaaatttgcaaagaaaagatcatctacaagcattgaagacaatgaggaa
gatgtcaaacccacagaaagcaagaaaacaagaacaagcagaatactagggaatgaaaat
gatgtttacaacgagccttcaggaccgaaaagtaagaaggatatttgtaaaacattttca
ggagatactgatactggtggaagtgatgatgagatgtctgcatccaaagtagaaagaacc
caaatgaaggaaaatgaaaaagaatcagacaaaatgaaacttccaccctgtccttatgga
aagaaatgctacaggaaaaatcctttgcatttcaaagagtatttgcaccctgacaaggat
agtagtgatgatgatgatgataaagtggctggagatgatagtgatgattacagacctgtt
tgtccttatggctccagttgttacaggcagaaccctcaacacagaaaagatttcgaacac
actgatgccgtaggtcccaaacataaaacaacaaagaaaaggaaaaaccttgatggcaca
agtgatgatgatgggcacaatacatatgattacaatgacagcttcttagctgatgatgcc
agtgatgttaaggaggatggtagtagctactcagggtctgatgaccctgattggcagcca
gtacaaggtgatgataatggcaaggaggatgtcaaccagttgttacatgaggctaaaggg
tttctatgcaataagaaaatgacaaaaccagtttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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