KEGG   Pocillopora damicornis (lace coral): 113671447
Entry
113671447         CDS       T05773                                 
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 1-like isoform X1
  KO
K11832  ubiquitin carboxyl-terminal hydrolase 1 [EC:3.4.19.12]
Organism
pdam  Pocillopora damicornis (lace coral)
Pathway
pdam03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:pdam00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    113671447
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:pdam01002]
    113671447
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pdam04121]
    113671447
   03400 DNA repair and recombination proteins [BR:pdam03400]
    113671447
Enzymes [BR:pdam01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     113671447
Peptidases and inhibitors [BR:pdam01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   113671447
Ubiquitin system [BR:pdam04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    113671447
DNA repair and recombination proteins [BR:pdam03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     113671447
SSDB
Motif
Pfam: UCH UCH_1
Other DBs
NCBI-GeneID: 113671447
NCBI-ProteinID: XP_027043445
Position
Unknown
AA seq 647 aa
MPTVFQTDSPPSSPRSPPRKRTKFSLKLKNKKKSQSEIENREKLCPIFSPSTAQNTNDDD
VLEPLIPPPFAGLKNLGNICYANAVLQVLRFCPGLMQSVMEIDSLVRKLYPSKSADDEQG
PDKDIDPCGIAGNDHRAVVCKLKELFSEMNELELDYSENKENCDHLVQRRNHLILAAIPC
GFMEMFRKQNPIFEDKQQHDAQEFLCSLLVNLQDTENDVKKKIEDATVVRDLDALFVNSK
SNNKVSKHISKVEELFQGQLLHQTKCMTCEEAKKRFESFQDISVPVQQEPRVYDVKTANT
FSPTPKKGQDGKSLPWALSQFARIEHLTGENKYFCGNCLTHSEAEISTCFDKLPRILTIH
LKRFTANTLLGRFSLNSVSKITSNLETPMELSLKEWCSKSCPLSNPTYHLFGIVMHSGMT
SCSGHYQAYVQVPKHYQHGNTQVLPSHNGKKVDSYEALAAEFNSDFFSSADKPDKIQPLS
SESTADKVKTTCISGITKFFHKSKRHSTNETNPDERTDEESKHHGEKRRNFSTPTYNCAG
TGKSVSKIRSFQYQDGAKSHRSAIKQLNFQEENDKQQYQEKQMQGARQISHTCTSVTETQ
ELQWIHFDDAEVRTIEESDVKTLLSSSESSFTSPYLLFYKLAEPYMI
NT seq 1944 nt   +upstreamnt  +downstreamnt
atgccgacggtttttcagacagattcacctccatcaagtccaagaagcccacctcgcaaa
agaaccaagttttcattgaagcttaagaacaagaagaagtcgcagagcgagatcgaaaac
agagagaagttatgcccaatatttagcccctcgactgctcagaatacaaatgatgatgac
gtattggaacctcttattcctcctccttttgctggactgaagaatcttggaaatatttgc
tatgcaaacgctgtactgcaagtgttgcggttttgtcccggcttaatgcaatctgtcatg
gaaatcgactcactcgttagaaagctatatccctcaaaatcagctgacgatgaacagggc
ccagataaagacatagacccttgtggcattgctggtaatgatcacagagcagttgtttgc
aaactaaaagagcttttcagtgagatgaatgagctggagctggattacagtgagaacaaa
gagaattgtgatcatcttgtgcaaagaagaaatcatctgattcttgctgcaataccttgt
ggcttcatggagatgtttaggaagcaaaatccaatatttgaggacaaacagcagcacgat
gcccaagaattcttgtgcagcttgcttgtaaatcttcaagatacagagaatgatgttaaa
aagaaaattgaagatgcaacagttgtaagagatttagatgccctatttgtcaattcaaag
agtaacaacaaagtgagcaaacatataagtaaagtggaagaattgtttcagggacaactt
ctgcatcagactaaatgcatgacatgtgaagaggccaagaaacgatttgaaagtttccaa
gatatcagtgttccagttcaacaggagccaagagtgtatgatgtaaaaactgctaacaca
ttttcaccaacaccaaagaaaggacaagatggcaaaagccttccttgggccctgtctcag
tttgccaggatagaacatctgacaggagaaaacaaatacttttgcgggaattgtctcacc
cattctgaagctgagatatccacatgttttgacaaacttccaagaatacttacaatccac
ctcaagaggtttactgcgaacactttattgggcagattttcattaaacagtgtttccaag
ataacttcaaatcttgagacacccatggagctgtctttgaaagagtggtgttcaaaatca
tgtcctctatctaaccctacctaccatctatttggcattgtaatgcacagtggtatgaca
tcttgcagtggacactatcaggcttatgttcaggtgccaaaacactatcagcatggcaac
acacaggtattgccctctcataatggaaagaaggtggacagttatgaagcattagctgca
gagttcaattcagactttttctcaagtgctgacaaacctgataaaattcaacccttgagt
tcagaaagcactgctgataaagtaaagacaacatgtatttctggaataacaaaattcttt
cacaaatcaaagaggcattccacaaatgagactaacccagatgagagaactgatgaagaa
agcaaacaccatggtgaaaaacgaagaaattttagcacaccaacatacaactgtgcagga
actggaaagtcagtgagtaagatccgcagttttcagtaccaagatggtgcaaagtctcac
agaagtgcaataaagcaattgaatttccaagaagaaaatgacaaacaacagtatcaagaa
aaacagatgcagggtgctagacaaatatcacatacttgtacaagtgtcacagaaactcag
gaattacaatggattcattttgatgatgctgaagttagaaccatagaggaatctgatgta
aaaacattgctgtcgtcatctgaatcatccttcacctccccttacttgctgttttacaag
ttagctgagccatatatgatttaa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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