KEGG   Pocillopora damicornis (lace coral): 113681915
Entry
113681915         CDS       T05773                                 
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96-like isoform X1
  KO
K14297  nuclear pore complex protein Nup98-Nup96
Organism
pdam  Pocillopora damicornis (lace coral)
Pathway
pdam03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pdam00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    113681915
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pdam03019]
    113681915
   03036 Chromosome and associated proteins [BR:pdam03036]
    113681915
Messenger RNA biogenesis [BR:pdam03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     113681915
Chromosome and associated proteins [BR:pdam03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    113681915
SSDB
Motif
Pfam: Nup96 Nucleoporin2 Nup98_GLEBS DUF4852
Other DBs
NCBI-GeneID: 113681915
NCBI-ProteinID: XP_027054850
Position
Unknown
AA seq 1884 aa
MFGSTSSTPFGTGSTFGTGTTFGGQTSTAQFGAGGGTGLFGNNQKPLGFGSTFTQPQASG
TSTLFGGTNTGSIFGGTGTTTGNIFGQQQPTSQSSFGGFGTTGGGLFGSTAKTTAGTSVF
NTGGQTTFGSTATSGFGSSAGSSLFGSNATKGTGLFGSTQAGSSLFGQTSAANTANFGVL
GASGNTALGTPVKFNVVPGTDSMVKNGITTNISVRHQCITVMANYDKKSLEELRIEDYEA
GRKTGATGATGATGSTGFPGLATSSAAGSLFGNTASTGFGAAQKPATGFGTTGVFGAGNT
TTSGLFAQQQQTTGGLFAQQKTGGLFGAQTSSAGAPAFATGFGTGVFGQTSSGQTTQSGL
FGGTSTSTGTGLFATQSSGFGQTQTGTGGLFGQTGFGLGQQQSTAFGKPFGALGTGATGT
LFGAQNKPATGFNFGASAGGLGTSAFNTATSQAGGLFGAKPTTFGTGTAFGTNTGTGLFG
TTGTLGAGTGLNAGTLGTFGTLGAQQTSLFGGNALGGNQNTALTTLQQQQQQKVLEQQLL
ILSNSPFGDSPLFRNSLLEKSKPERASTATTSSLQKVVTTPSHYKVSPRPAARIKPKPIN
NHTMNKSKLFEGLEEDSGLSPDTFVPRKNIKKLVLKTKSSKEDSPLSVVDTTRVKLSTLE
GDDSLPATRSPLPPSPPPSQDMSPMRLSATPAGLQSGERSSDDRVSTSAGVSPMGVRFSR
VPDSVDTTISELNVRRLPRRDEEDGSVKGSVIGEDSSSDTTSRDNVGVVLKRLEYYTVPP
VQELNQQMDSNGDIFVNDFVVGREGYGKVKFYGRTNVAGLNLDEIVFFRRREIEVYPDTY
LNKPPVGEELNKKAEITLENVWPSDKTTREPIKSPERLNLLGWQKRVETATEKLGATFLD
FNLHTGYWVFTVDHFTRYRMDDEFFDDEQAQKKLKRPPLKSYSQDLEVSIEKEKEEIFRR
LQEKKQQLEVYEKKKQQAALSSLDQDSVMADIDQQTFPEEMLEDQIGDGSDGEEEVDSSP
ASHQLASALGMNAQRIQVMKASFFADPSQLAAPFAKDSPTVDKSLFSSSLSKAGHLKSSV
YPPSMPLGPLLSPKVQRSVDESRQMSQSLFGSPQIGVYPLRYPLVHDVTPVAPPSPIQLP
SAIGTAMDIGIKVVGARNQFGLVPKKDSLVNGKENLIADAGLMMGRSFRVGWGPGFVLVH
SGTPLGKQEGKPAPPTSVDFLSMKPRPSSSEGSAPFGVTIEKLNVALHDSRGPSGVVLEH
VRQQHETVLEAQLQHTVVSSEEHCPFFQPSSGVKALHHHAEVARRNKEATDPGPLRDGAE
QICLVWDLVVALWGKLTEDDDDDDDDSDIGAEEDRETYQNRVARKQALSNWLAEAAKTKI
SQEVDNANFQESDHLKSIFSYLTGKQISRACREAQLHGDYRLSLLLSQVTGNTFTRNLLY
KQLADWQEMKADVFINRERIKIYALLAGVMVWEISRDPASQVQSLMRQEVNVCEGLDWKR
VLAVHLWYFCSPTCSIADALQAYESSFKGSSSHGRYGASPHPPYVEEDEEDEDENKFITR
DTCYHLLKLYCKRSHRLERLLSPSTSTALQLDFRLSWHLYQVLLSLHYTHLSERHAAMLH
CEFAAQLEGLGLWHWAAFVLLHIEEPTRRENVVRSLLCRYCCVSEDHANSEKERFMLNKL
KIPAEWIHEAKALRARYEGKTREEAFHLVKARHWSLGHSVILRSLVSDAIINAEYDFLKT
LLKELEARDRSSTVKDWATGGQVFLDYLSLMEKFQDISKENFVPTKYDWEGIYAEVTSLC
SRINSLTSDIPKDMLCQYDMAKMCANFLKIVLKELTDLTDEGEALLPTHILVPHVTKLPM
PEDCTVEELRQLIPSYIQEIAAEN
NT seq 5655 nt   +upstreamnt  +downstreamnt
atgtttggatctacaagtagtacaccttttggtaccggcagtacctttggaacagggaca
acttttggaggccagactagtacagcacagtttggtgcaggtggaggtactggtcttttt
ggaaacaaccaaaaaccactgggctttggaagtacatttactcagccccaggcctcaggg
acctcaacattgtttggaggcacaaatactggaagtatatttggaggaactggaactacc
actggaaatatctttgggcaacaacaacccactagtcaatcctcctttggtggttttgga
actactggaggtggtttgtttggtagtacagcaaaaactactgcagggacaagtgttttc
aacacaggtggccaaacaacttttggttccactgcaacatcaggatttggatcctcagca
ggctccagtttgtttgggtccaatgctacaaagggtactggattgtttggaagtacgcaa
gctggctcctcattatttgggcaaacttctgcagctaatacagcaaactttggagtgctg
ggtgcttctggcaacacagcacttggaacacctgtaaagttcaatgttgttccaggaact
gatagcatggttaaaaatggaattaccaccaatattagtgtcaggcatcaatgcatcact
gtcatggcaaattatgataagaagagtttagaggagctaagaattgaagattatgaagct
ggacgtaaaacaggagcaactggagcaactggagcaactggctcaactggttttccaggt
ctggccacaagttcagctgcaggaagtctgtttggaaatacagcttccacaggattcggt
gctgcacagaaaccagcaactgggtttggaactacaggcgtgtttggtgctggtaatacc
acaacctctggtctgtttgcccaacaacaacaaacaactggagggctctttgctcagcag
aaaacagggggactgtttggggctcaaacatcaagtgctggtgcccctgcatttgctaca
ggttttggtacaggtgtctttggacagacctccagtggacagacaactcagtctggtctc
tttggtggaacatccacatctactggcactggtttgtttgcaacacaaagttcaggtttt
ggccaaacacagactggaacagggggactttttggacaaacaggatttgggctgggtcag
cagcagtcaacagcatttggaaaaccatttggtgctttgggtactggtgcaactggaact
ttgtttggtgcacagaataaacctgcaacaggtttcaactttggagccagtgcaggagga
ctaggaaccagtgcatttaatactgcaacaagccaagctggaggactttttggtgccaaa
cctactacatttgggacaggaacagcatttggtactaatacaggcacaggattgtttgga
accacaggcaccctaggggcaggaacaggattgaacgcagggacactaggtacttttggc
accctaggcgctcaacaaacaagtttgtttggaggaaatgctttaggaggcaaccaaaat
acagcattgaccactttgcagcaacaacaacagcaaaaggttctggagcaacaacttttg
atcctgtcaaactcaccatttggtgactcaccattattccgaaattcactgttggagaaa
tccaaaccagaaagggcctccactgctactacatcctcattacaaaaggtggttaccaca
ccttcacactacaaggtttcccctcgaccagcggcaagaataaaacccaagccaataaac
aatcatactatgaacaagtccaaactgtttgagggcctggaggaggactctggtcttagt
cctgacacatttgtacccagaaagaacatcaaaaagcttgttttaaaaaccaagtcaagc
aaagaagattcacccctatctgtggttgacactaccagggtcaaactcagcactttggag
ggagacgacagtttgccagcaaccagatcacccttacctccctctccacccccgtcacaa
gatatgtcacctatgaggttgtctgcgacccctgctgggctgcagagtggagagaggtct
tctgacgacagggtgagtaccagcgctggtgtcagtccaatgggagtgcggttctctcgt
gtgccagattctgttgataccaccatctcagaattgaatgtacgccgcctaccaagaaga
gacgaagaagacggaagtgtcaaaggttctgtgattggtgaggacagttcgtcagacact
acatctagagacaatgttggtgttgtcttgaaaaggcttgagtattacaccgttcctcca
gtgcaagaacttaaccagcagatggacagtaacggagatatatttgtgaatgactttgtg
gttggccgcgaaggttatggaaaagtcaaattttacggcagaaccaatgtcgccggactc
aacctggatgaaattgtgttcttcaggcgccgtgaaatagaagtttatcctgacacgtac
ctcaataaacctcctgtgggcgaagaactgaacaagaaagcagaaatcactctggagaat
gtctggccaagtgacaagactactcgtgagccaataaaaagtcctgaaagactcaacctt
ctcggctggcaaaagcgagtggaaactgctaccgaaaaacttggagcaacttttcttgat
ttcaaccttcacactggatactgggtgttcacggtggatcatttcacgcggtatagaatg
gacgacgaatttttcgatgatgaacaagcccaaaagaaactgaagaggcctccattaaaa
tcatactcacaggatctcgaggtctctattgaaaaggaaaaagaggaaatctttagacgt
ctgcaagaaaagaaacaacagttagaagtttatgagaagaaaaaacagcaagctgctctc
tcttccctagaccaggatagtgtcatggcggacatcgatcaacaaacttttcctgaggaa
atgctcgaagatcaaattggagatggtagtgatggtgaagaagaggttgacagctcccct
gccagccatcagttggcatcagcacttggaatgaatgcacagaggatccaagtcatgaaa
gcatcattctttgccgatccgtctcaactcgcagcacccttcgctaaagatagtcccact
gtagacaagtctcttttcagttcatctttatcaaaagctggccatttgaagagttctgtg
tatccaccatccatgccattaggtcctttgctgtcccctaaagtacagcgctctgttgat
gagtcccgacaaatgtcccagtcactgtttggcagcccccagataggggtctatcctctt
cggtaccccttggtgcacgatgtaaccccagtagcccctccctcaccaattcagcttcca
agtgccatcggcacagcgatggacattggaattaaagtcgttggcgctcggaatcagttc
ggtcttgtccctaaaaaggactcccttgtcaacggtaaagagaaccttattgccgatgca
gggttgatgatgggccgctcctttcgtgttggctgggggcctggatttgtcttggtccat
agtggtactcccttggggaaacaagagggaaaaccagccccccccacctcggtagatttt
ttgtccatgaagcctagacccagcagcagtgaaggatcggcgccttttggagtgacaata
gagaaactgaacgtagctttacatgacagtcgtggcccaagtggtgttgtgttggagcat
gtaaggcaacagcatgaaactgtacttgaagcacagttacaacacactgtggtgtccagt
gaagagcactgtccgttctttcaaccttcctctggcgtcaaagccttgcaccatcacgca
gaagtcgcccgaaggaacaaggaagctacagacccagggcccctaagagatggagctgaa
cagatttgtttagtttgggacctggttgttgcgctttggggcaaacttacggaagacgac
gacgacgatgatgatgacagcgatattggggctgaagaagacagagaaacatatcagaac
cgtgtggctaggaaacaggctctgtcaaactggttagctgaggctgccaaaacgaaaatt
tcccaggaggtggataatgcgaatttccaggaaagtgatcatttgaaatccatcttcagc
tatttgaccggaaaacagatcagccgggcctgtcgtgaggcgcagcttcatggtgattat
cgactttcattgttgttgtcacaagtcacagggaacacattcaccagaaacttgctgtac
aaacaactggcggattggcaggaaatgaaggcggatgtatttatcaacagagaaagaatt
aaaatctacgctctgcttgctggtgtcatggtatgggagatatcacgtgacccagccagt
caagttcaaagtctgatgcgtcaagaggtcaacgtctgtgagggactggattggaagaga
gtactggcggtacacctgtggtacttctgttcaccaacgtgttcaatagctgatgcgttg
caagcgtacgagtcctcatttaagggaagttcgagtcacggcagatatggtgcttctcct
catccgccttatgtcgaagaagacgaagaagatgaggatgaaaacaagtttataacaaga
gatacctgttatcacttgttaaagctctactgcaaaagatcgcacagactagagagacta
ctatcaccatcaacatccactgctctgcaactagattttagattgagttggcatctgtac
caggttcttttatcgctccactacactcatctttccgagcgacacgcggccatgttacac
tgtgagtttgctgcccagctggagggactgggtctgtggcattgggcggcgtttgtcttg
ttgcacattgaggaaccaaccaggcgagagaatgtggttcggagccttctgtgtcgttac
tgttgtgtgtcagaggatcatgctaactcagagaaagaacgtttcatgttgaataaattg
aaaatccctgcggaatggatacacgaagctaaggccttgcgagcgcgctatgaaggaaaa
actcgtgaggaagctttccacctagtcaaggctcgccactggagtctggggcatagcgtt
attctgcgcagtctcgttagtgacgcaattattaacgcggaatacgactttttaaaaact
ttattgaaagaactggaagcacgagatcgcagctcgaccgtgaaggattgggcaacagga
gggcaggtgtttctggattatctttctttgatggagaagttccaagacatttcaaaggag
aactttgtgccaactaagtatgactgggaaggcatctatgctgaagtcacgtctctttgt
tcgaggatcaacagtttaacatcggacatacccaaagacatgttgtgtcaatacgacatg
gctaagatgtgcgctaatttcttgaagattgtcttgaaggaactgacggacctcaccgat
gaaggagaggcccttttgccaacacatatactagttcctcacgtaaccaaactcccgatg
cccgaggactgtaccgtagaggaattacgtcaactgattccgagctacatccaggagatc
gccgctgagaattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (4)   
   Pfam (4)   
All databases (20)   

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