KEGG   Pocillopora damicornis (lace coral): 113684911
Entry
113684911         CDS       T05773                                 
Name
(RefSeq) DNA damage-binding protein 1-like
  KO
K10610  DNA damage-binding protein 1
Organism
pdam  Pocillopora damicornis (lace coral)
Pathway
pdam03420  Nucleotide excision repair
pdam04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pdam00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    113684911
  09124 Replication and repair
   03420 Nucleotide excision repair
    113684911
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pdam04121]
    113684911
   03400 DNA repair and recombination proteins [BR:pdam03400]
    113684911
Ubiquitin system [BR:pdam04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Adoptor protein
     113684911
DNA repair and recombination proteins [BR:pdam03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      113684911
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      113684911
SSDB
Motif
Pfam: MMS1_N CPSF_A
Other DBs
NCBI-GeneID: 113684911
NCBI-ProteinID: XP_027058131
Position
Unknown
AA seq 1160 aa
MAHNYVVTAHKPTAVNAAVVGNFTAPDDLNLIIAKNTRLEIHVVTPEGLRPHLDIGIYGR
ISVMELFRPPNEPQDLLFILTARYRVFILSYKSESGDVVTRACGDVQDRIGRPSDTGLIG
IIDPESRMIGLRLYDGLFKVIPLELDSNKELKAFNIRLEELHVIDIAFLHGCQVPTIVFI
YEDPHGRHVKTYEIVLRDKEFSKGPWKQDNVEVEASRVIAVPEPLGGALIIGQESITYHK
GANYHAIAPPALKQSTITCYGKIDANGSRYLLGDMNGRLFMLLLERQELMDGNVEVKDLK
LELLGETTIALCLTYLDNGVVFIGSAMGDSQLVKLNTETNENGSHVHVMETFTNLGPIVD
MVVVDLERQGQGQLVTCSGALKEGSLRIIRNGIGIHEHATISDLVGIMGIWPLRLQKTAK
NFDDALLLSFVGQSRILALAGEEVEETEIPGFDDDQQTYFCGNVSGDQIIQVTTLSVRLV
NCETRELVCEWRHPGGKNISVCACNSGQLVLAVGCELYYLEIIAGNLNLISHTTLEHEVA
CLDITPTYDSDTRAQLVAVGLWTDISVRVLKLPGCEQLFVEMLGGEIIPRSILKTSFEGI
HYLLCALGDGTLFYFTMDPNTGSLSERKKVTLGTQPTMLRTFKSLSTTNVFACSDRPTVI
YSSNHKLVFSNVNLKEVNYMCPLNSEGFPDSLAVASEGALTIGTIDEIQKLHIRTVPLGE
TPRRIAYQESTQTFGVISMRVEVLDPASNTTRPLHPSASTMAQNITTSVSAGMPGTSAGS
SAGGRGVADGITFGDEVERSSLLIIDQHTFEVTHAHDLQDHECATSLISCTLSGDPNSSY
SSGTSNTYYCVGTAYVFPEEAEPKTGRLILFQLLEGKLVQVADKEVKGAVYSLVEFNGKV
LAGINSTVSIYEWTADKELRVECSFLNNILALYLKSKGDFILVGDLMRSMTLLTYKAMEG
SLEEIAHDYSPNWMTAVEILDDDTFLGAENSFNLFTCQKDSGSAADDDRSYLQEAGQFHL
GEFVNVFRHGSLVMEHPGEASTPFQGCVLFGTVNGTIGIVAQLPQELSAFLTQVQGKLSK
VIKSVGKIDHSFWRCFSNERRVEPATGFVDGDLIESFLDLPRSSMEEVASGLQIDDGSGM
KKECTVEDLVKVVEELTRIH
NT seq 3483 nt   +upstreamnt  +downstreamnt
atggctcataactatgtagtgacggctcataagccaacggccgttaatgctgctgtagtt
ggtaattttacagccccagatgaccttaatttgatcattgcaaaaaacactcgtctagag
atccatgttgtgacaccagaaggcctgagaccgcatcttgacatcggaatatacggacga
atttctgttatggaactgttcagacctccgaatgaacctcaggatttgttatttatttta
acggcaaggtacagggtgtttatactaagttacaagtcagagtctggagatgttgttacc
agggcttgtggggatgttcaggacagaattggcagaccatccgacactggtttgattggt
atcatagaccctgagtcacggatgatcggtcttcggctttatgatggactttttaaggtg
attcctctggaactggattcaaacaaagaactaaaagcattcaacatcaggcttgaagag
ctgcatgtgattgacattgcatttctacatggctgtcaggttcccacaattgttttcatt
tatgaggatcctcatggacgccatgtaaaaacttatgagattgtactgcgtgataaagag
ttcagcaaggggccttggaagcaagacaatgtggaggtggaggcttcaagagttattgca
gttccagaacctcttggaggggcacttatcattggacaggaatcaataacataccataaa
ggggccaattatcatgcaattgctccaccagctctgaagcaaagcaccataacatgctat
gggaagattgatgctaatggttcaaggtatctcttgggtgacatgaatggtcgacttttt
atgttactgctggagagacaggaactgatggatggtaacgttgaagtgaaggatctgaaa
ctggagcttcttggagagactactattgcactctgtctcacatacttggacaatggtgtg
gtatttattggttcagcaatgggagactcacaacttgttaagctcaacacagaaacaaat
gagaacggctcacatgttcatgtgatggagacattcaccaaccttggtcctattgtagac
atggtggtagttgacttggaaagacaaggacagggacagctggtgacatgttctggtgca
ctgaaggaaggctcattaagaataataaggaatgggattggtattcatgagcatgccacc
atatcagacctcgttggcattatgggtatctggcccctaagattacaaaagacagccaaa
aactttgatgatgcactgctcctatcttttgttggccagagcagaattctagcccttgct
ggtgaagaagttgaagagacagagattccaggttttgatgatgatcaacagacgtacttt
tgtggaaatgtttcaggagatcaaatcatccaggttacaacattgtcagtgcgtcttgtg
aattgtgagaccagggaacttgtttgtgaatggcgacatcctggtggtaagaacatcagt
gtctgtgcgtgcaactctggacagcttgtgctggccgtgggttgtgaattgtattatctg
gagataattgcaggaaaccttaatctgatcagccacacaacacttgaacacgaagttgct
tgtctggatatcacaccaacttatgattctgacaccagagctcagttagtagcagtagga
ctgtggacggacatttcagtgagagttctaaaactgccaggctgtgaacaactgtttgtt
gaaatgctgggaggagaaataattcctcgctccatactcaagacatcttttgagggtatt
cattaccttctctgtgctttgggagatggaaccttgttttatttcaccatggatccaaac
actggatctttgtctgagaggaagaaagtaaccctcggcacacagcctacaatgcttaga
acattcaagtcactgtccacaacaaatgtgttcgcctgctctgatcggcccacagtgatc
tattccagtaatcacaaacttgtgttctccaacgttaatctaaaggaggtgaattatatg
tgtccactgaactccgagggattcccagacagtcttgctgtggctagcgaaggagcgtta
acaataggaacaattgatgaaatccaaaaacttcacattcggacagttccattgggagaa
acgcccaggcgtattgcttaccaagagtccacacaaacatttggtgtaatctcaatgcga
gtagaggtcctggatccggcgtcaaatacaactcgacccctccaccccagcgcgagcact
atggctcagaacataacgaccagtgtgtcagcaggcatgccgggcacttccgccggaagt
tcagccggtggtaggggtgtggcagacggcataacatttggtgacgaggtggagagaagc
agtttgttgatcattgaccaacacacatttgaagtgactcatgctcacgatcttcaagat
cacgagtgtgctacaagcctgatctcttgcacactatctggtgaccctaacagctcctac
tcgagtggaacgtccaatacgtattactgcgttggcactgcgtatgtcttccccgaggaa
gctgagccaaagacgggacgtttgattttatttcagctcttggaaggtaaacttgtccaa
gtcgctgataaagaagtcaaaggtgctgtgtactcactggtggaatttaacggaaaagtc
ttggccggcattaacagcacggtcagtatatacgagtggacggctgacaaagaattacgt
gtggaatgcagctttttgaacaacatcttggctttgtatctcaagtctaaaggggatttt
attttggtgggtgacttaatgagatccatgacactgttaacttacaaagcaatggaggga
agtctagaagagattgcgcatgactatagtccaaactggatgacagcagtagagatccta
gacgatgatacgttccttggggctgaaaactcttttaacctgttcacctgccaaaaggac
agcggctccgcagctgatgatgacagatcgtatcttcaggaggctgggcagtttcatctt
ggcgagtttgttaacgtctttagacacggttctcttgtcatggaacatcctggtgaagcg
tcgacccctttccaaggctgcgtcctttttggaactgtcaatggaacaattggaatcgtc
gctcaattacctcaggaactgagtgcttttttgacgcaagtccaagggaaactcagcaaa
gttatcaagagcgtcggaaagattgaccacagcttctggcgctgtttttccaacgaacgg
agagttgagcctgccaccggctttgtggacggagatttaatcgaaagtttcctagaccta
ccgcggtccagtatggaggaggtagcctcgggactacaaattgatgatggtagtggtatg
aagaaagagtgtactgtggaagatctcgtgaaagttgttgaagaacttacaaggatccat
tag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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