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Database: PDB
Entry: 2YXZ
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Original site: 2YXZ 
HEADER    TRANSFERASE                             27-APR-07   2YXZ              
TITLE     CRYSTAL STRUCTURE OF TT0281 FROM THERMUS THERMOPHILUS HB8             
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: THIAMIN-MONOPHOSPHATE KINASE;                              
COMPND   3 CHAIN: A, B, C, D;                                                   
COMPND   4 EC: 2.7.4.16;                                                        
COMPND   5 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS;                           
SOURCE   3 ORGANISM_TAXID: 300852;                                              
SOURCE   4 STRAIN: HB8;                                                         
SOURCE   5 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   6 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   7 EXPRESSION_SYSTEM_STRAIN: ROSETTA-GAMITM(DE3);                       
SOURCE   8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE   9 EXPRESSION_SYSTEM_PLASMID: PET-11A                                   
KEYWDS    ALPHA/BETA STRUCTURE, TRANSFERASE                                     
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    M.GOTO                                                                
REVDAT   4   13-MAR-24 2YXZ    1       REMARK                                   
REVDAT   3   13-JUL-11 2YXZ    1       VERSN                                    
REVDAT   2   24-FEB-09 2YXZ    1       VERSN                                    
REVDAT   1   29-APR-08 2YXZ    0                                                
JRNL        AUTH   T.MATSUSHITA,M.KAN,M.GOTO,I.MIYAHARA,N.KAMIYA                
JRNL        TITL   CRYSTAL STRUCTURE OF TT0281 FROM THERMUS THERMOPHILUS HB8    
JRNL        REF    TO BE PUBLISHED                                              
JRNL        REFN                                                                
REMARK   2                                                                      
REMARK   2 RESOLUTION.    1.90 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : CNS 1.1                                              
REMARK   3   AUTHORS     : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE-              
REMARK   3               : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU,              
REMARK   3               : READ,RICE,SIMONSON,WARREN                            
REMARK   3                                                                      
REMARK   3  REFINEMENT TARGET : NULL                                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 48.65                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : 0.000                          
REMARK   3   DATA CUTOFF HIGH         (ABS(F)) : 2328165.930                    
REMARK   3   DATA CUTOFF LOW          (ABS(F)) : 0.0000                         
REMARK   3   COMPLETENESS (WORKING+TEST)   (%) : 92.4                           
REMARK   3   NUMBER OF REFLECTIONS             : 91864                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : THROUGHOUT                      
REMARK   3   FREE R VALUE TEST SET SELECTION  : RANDOM                          
REMARK   3   R VALUE            (WORKING SET) : 0.225                           
REMARK   3   FREE R VALUE                     : 0.264                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 10.000                          
REMARK   3   FREE R VALUE TEST SET COUNT      : 9188                            
REMARK   3   ESTIMATED ERROR OF FREE R VALUE  : 0.003                           
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED           : 6                            
REMARK   3   BIN RESOLUTION RANGE HIGH       (A) : 1.90                         
REMARK   3   BIN RESOLUTION RANGE LOW        (A) : 2.02                         
REMARK   3   BIN COMPLETENESS (WORKING+TEST) (%) : 79.50                        
REMARK   3   REFLECTIONS IN BIN    (WORKING SET) : 11782                        
REMARK   3   BIN R VALUE           (WORKING SET) : 0.2990                       
REMARK   3   BIN FREE R VALUE                    : 0.3350                       
REMARK   3   BIN FREE R VALUE TEST SET SIZE  (%) : 10.10                        
REMARK   3   BIN FREE R VALUE TEST SET COUNT     : 1322                         
REMARK   3   ESTIMATED ERROR OF BIN FREE R VALUE : 0.009                        
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 8836                                    
REMARK   3   NUCLEIC ACID ATOMS       : 0                                       
REMARK   3   HETEROGEN ATOMS          : 0                                       
REMARK   3   SOLVENT ATOMS            : 418                                     
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : 18.70                          
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 35.70                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : 10.40000                                             
REMARK   3    B22 (A**2) : -0.37000                                             
REMARK   3    B33 (A**2) : -10.03000                                            
REMARK   3    B12 (A**2) : 0.00000                                              
REMARK   3    B13 (A**2) : -7.79000                                             
REMARK   3    B23 (A**2) : 0.00000                                              
REMARK   3                                                                      
REMARK   3  ESTIMATED COORDINATE ERROR.                                         
REMARK   3   ESD FROM LUZZATI PLOT        (A) : 0.25                            
REMARK   3   ESD FROM SIGMAA              (A) : 0.26                            
REMARK   3   LOW RESOLUTION CUTOFF        (A) : 5.00                            
REMARK   3                                                                      
REMARK   3  CROSS-VALIDATED ESTIMATED COORDINATE ERROR.                         
REMARK   3   ESD FROM C-V LUZZATI PLOT    (A) : 0.30                            
REMARK   3   ESD FROM C-V SIGMAA          (A) : 0.29                            
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES.                                   
REMARK   3   BOND LENGTHS                 (A) : 0.005                           
REMARK   3   BOND ANGLES            (DEGREES) : 1.300                           
REMARK   3   DIHEDRAL ANGLES        (DEGREES) : 23.20                           
REMARK   3   IMPROPER ANGLES        (DEGREES) : 0.800                           
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL MODEL : RESTRAINED                                
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.    RMS    SIGMA                
REMARK   3   MAIN-CHAIN BOND              (A**2) : 1.210 ; 1.500                
REMARK   3   MAIN-CHAIN ANGLE             (A**2) : 1.780 ; 2.000                
REMARK   3   SIDE-CHAIN BOND              (A**2) : 1.860 ; 2.000                
REMARK   3   SIDE-CHAIN ANGLE             (A**2) : 2.720 ; 2.500                
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELING.                                              
REMARK   3   METHOD USED : FLAT MODEL                                           
REMARK   3   KSOL        : 0.38                                                 
REMARK   3   BSOL        : 59.55                                                
REMARK   3                                                                      
REMARK   3  NCS MODEL : NULL                                                    
REMARK   3                                                                      
REMARK   3  NCS RESTRAINTS.                         RMS   SIGMA/WEIGHT          
REMARK   3   GROUP  1  POSITIONAL            (A) : NULL  ; NULL                 
REMARK   3   GROUP  1  B-FACTOR           (A**2) : NULL  ; NULL                 
REMARK   3                                                                      
REMARK   3  PARAMETER FILE  1  : PROTEIN_REP.PARAM                              
REMARK   3  PARAMETER FILE  2  : WATER_REP.PARAM                                
REMARK   3  PARAMETER FILE  3  : ION.PARAM                                      
REMARK   3  PARAMETER FILE  4  : NULL                                           
REMARK   3  TOPOLOGY FILE  1   : PROTEIN.TOP                                    
REMARK   3  TOPOLOGY FILE  2   : WAT.TOP                                        
REMARK   3  TOPOLOGY FILE  3   : ION.TOP                                        
REMARK   3  TOPOLOGY FILE  4   : NULL                                           
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 2YXZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 01-MAY-07.                  
REMARK 100 THE DEPOSITION ID IS D_1000027275.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 04-JUL-05                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : 7.5                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : SPRING-8                           
REMARK 200  BEAMLINE                       : BL41XU                             
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.0                                
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : ADSC QUANTUM 315                   
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : HKL-2000                           
REMARK 200  DATA SCALING SOFTWARE          : HKL-2000                           
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 91864                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 1.900                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 171.499                            
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : NULL                               
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 92.2                               
REMARK 200  DATA REDUNDANCY                : NULL                               
REMARK 200  R MERGE                    (I) : NULL                               
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : NULL                               
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 1.97                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 76.7                               
REMARK 200  DATA REDUNDANCY IN SHELL       : NULL                               
REMARK 200  R MERGE FOR SHELL          (I) : NULL                               
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : NULL                               
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIR                          
REMARK 200 SOFTWARE USED: SHARP                                                 
REMARK 200 STARTING MODEL: NULL                                                 
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 48.89                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.41                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULFATE, DIOXANE, HEPES-NA,     
REMARK 280  PH 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K             
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1                          
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X,Y,-Z                                                 
REMARK 290       3555   X+1/2,Y+1/2,Z                                           
REMARK 290       4555   -X+1/2,Y+1/2,-Z                                         
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000 -1.000000        0.00000            
REMARK 290   SMTRY1   3  1.000000  0.000000  0.000000       70.78200            
REMARK 290   SMTRY2   3  0.000000  1.000000  0.000000       26.09500            
REMARK 290   SMTRY3   3  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   4 -1.000000  0.000000  0.000000       70.78200            
REMARK 290   SMTRY2   4  0.000000  1.000000  0.000000       26.09500            
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1, 2                                                    
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC                           
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC                    
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 5390 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 22890 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -38.1 KCAL/MOL                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C                                  
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 2                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC                           
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC                    
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 4970 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 22500 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -41.6 KCAL/MOL                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D                                  
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     LYS A   306                                                      
REMARK 465     GLY A   307                                                      
REMARK 465     TYR A   308                                                      
REMARK 465     ALA A   309                                                      
REMARK 465     HIS A   310                                                      
REMARK 465     PHE A   311                                                      
REMARK 465     LYS B   306                                                      
REMARK 465     GLY B   307                                                      
REMARK 465     TYR B   308                                                      
REMARK 465     ALA B   309                                                      
REMARK 465     HIS B   310                                                      
REMARK 465     PHE B   311                                                      
REMARK 465     LYS C   306                                                      
REMARK 465     GLY C   307                                                      
REMARK 465     TYR C   308                                                      
REMARK 465     ALA C   309                                                      
REMARK 465     HIS C   310                                                      
REMARK 465     PHE C   311                                                      
REMARK 465     MET D     1                                                      
REMARK 465     LYS D   306                                                      
REMARK 465     GLY D   307                                                      
REMARK 465     TYR D   308                                                      
REMARK 465     ALA D   309                                                      
REMARK 465     HIS D   310                                                      
REMARK 465     PHE D   311                                                      
REMARK 470                                                                      
REMARK 470 MISSING ATOM                                                         
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;           
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;          
REMARK 470 I=INSERTION CODE):                                                   
REMARK 470   M RES CSSEQI  ATOMS                                                
REMARK 470     ARG A   9    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     ARG A  14    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     GLU A  23    CG   CD   OE1  OE2                                  
REMARK 470     LYS A  57    CG   CD   CE   NZ                                   
REMARK 470     GLU A  94    CG   CD   OE1  OE2                                  
REMARK 470     ARG A 126    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     GLU A 141    CG   CD   OE1  OE2                                  
REMARK 470     TYR A 172    CG   CD1  CD2  CE1  CE2  CZ   OH                    
REMARK 470     GLU A 230    CG   CD   OE1  OE2                                  
REMARK 470     GLU A 246    CG   CD   OE1  OE2                                  
REMARK 470     GLU A 268    CG   CD   OE1  OE2                                  
REMARK 470     ARG A 289    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     LEU B   6    CG   CD1  CD2                                       
REMARK 470     ARG B   9    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     GLU B  23    CG   CD   OE1  OE2                                  
REMARK 470     GLU B  38    CG   CD   OE1  OE2                                  
REMARK 470     ARG B  52    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     LYS B  57    CG   CD   CE   NZ                                   
REMARK 470     GLU B  94    CG   CD   OE1  OE2                                  
REMARK 470     GLU B  97    CG   CD   OE1  OE2                                  
REMARK 470     GLU B  98    CG   CD   OE1  OE2                                  
REMARK 470     ARG B 114    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     ARG B 126    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     GLU B 129    CG   CD   OE1  OE2                                  
REMARK 470     LYS B 147    CG   CD   CE   NZ                                   
REMARK 470     LEU B 191    CG   CD1  CD2                                       
REMARK 470     GLU B 246    CG   CD   OE1  OE2                                  
REMARK 470     GLU B 250    CG   CD   OE1  OE2                                  
REMARK 470     GLN B 267    CG   CD   OE1  NE2                                  
REMARK 470     GLU B 268    CG   CD   OE1  OE2                                  
REMARK 470     LYS B 278    CG   CD   CE   NZ                                   
REMARK 470     GLU B 294    CG   CD   OE1  OE2                                  
REMARK 470     LYS C   4    CG   CD   CE   NZ                                   
REMARK 470     GLU C   8    CG   CD   OE1  OE2                                  
REMARK 470     ARG C  14    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     LYS C  57    CG   CD   CE   NZ                                   
REMARK 470     ARG C 126    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     GLU C 246    CG   CD   OE1  OE2                                  
REMARK 470     LYS C 278    CG   CD   CE   NZ                                   
REMARK 470     ARG D   2    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     LYS D   4    CG   CD   CE   NZ                                   
REMARK 470     GLU D   8    CG   CD   OE1  OE2                                  
REMARK 470     ARG D   9    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     LEU D  12    CG   CD1  CD2                                       
REMARK 470     ARG D  14    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     LEU D  18    CG   CD1  CD2                                       
REMARK 470     GLU D  23    CG   CD   OE1  OE2                                  
REMARK 470     ARG D  40    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     LYS D  57    CG   CD   CE   NZ                                   
REMARK 470     GLU D  94    CG   CD   OE1  OE2                                  
REMARK 470     ARG D 106    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     ARG D 126    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     LEU D 139    CG   CD1  CD2                                       
REMARK 470     LYS D 182    CG   CD   CE   NZ                                   
REMARK 470     GLU D 230    CG   CD   OE1  OE2                                  
REMARK 470     GLU D 246    CG   CD   OE1  OE2                                  
REMARK 470     LYS D 278    CG   CD   CE   NZ                                   
REMARK 470     LYS D 280    CG   CD   CE   NZ                                   
REMARK 470     ARG D 289    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     GLU D 294    CG   CD   OE1  OE2                                  
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    GLU A  23       63.37   -112.93                                   
REMARK 500    PRO A 190       97.23    -64.41                                   
REMARK 500    PRO B 190       79.50    -68.64                                   
REMARK 500    ASP B 222       -8.91    -59.24                                   
REMARK 500    ARG B 299       55.23     36.98                                   
REMARK 500    PRO C 190       93.76    -61.86                                   
REMARK 500    LYS D   4       -7.40    -53.44                                   
REMARK 500    ALA D 117     -169.21   -115.99                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
DBREF  2YXZ A    1   311  UNP    Q5SL69   Q5SL69_THET8     1    311             
DBREF  2YXZ B    1   311  UNP    Q5SL69   Q5SL69_THET8     1    311             
DBREF  2YXZ C    1   311  UNP    Q5SL69   Q5SL69_THET8     1    311             
DBREF  2YXZ D    1   311  UNP    Q5SL69   Q5SL69_THET8     1    311             
SEQRES   1 A  311  MET ARG LEU LYS ASP LEU GLY GLU ARG ALA LEU LEU ALA          
SEQRES   2 A  311  ARG LEU ALA PRO LEU GLY TYR PRO PRO GLU ALA PRO LEU          
SEQRES   3 A  311  PRO PRO GLY ASP ASP ALA GLY GLY VAL TRP ALA GLU GLY          
SEQRES   4 A  311  ARG ALA TRP LEU LEU LYS THR ASP GLY PHE LEU TYR ARG          
SEQRES   5 A  311  GLU VAL ALA LEU LYS GLY MET GLY PRO PHE GLU VAL GLY          
SEQRES   6 A  311  PHE ARG GLY VAL ALA ALA THR ALA SER ASP LEU LEU ALA          
SEQRES   7 A  311  LYS MET GLY ARG PRO LEU GLY PHE THR LEU GLY LEU PHE          
SEQRES   8 A  311  LEU PRO GLU ASP LEU GLU GLU GLY PHE VAL LEU GLU LEU          
SEQRES   9 A  311  VAL ARG GLY ALA ALA GLU ALA ALA LYS ARG LEU GLY ALA          
SEQRES  10 A  311  PHE LEU LEU GLY GLY ASP THR ASN ARG GLY VAL GLU VAL          
SEQRES  11 A  311  ALA LEU THR VAL SER GLY TYR ALA LEU ALA GLU ALA PRO          
SEQRES  12 A  311  LEU PRO ARG LYS ALA LEU PRO GLY ASP LEU LEU TYR LEU          
SEQRES  13 A  311  ALA GLY ASP ARG TRP GLY ARG THR GLY ALA ALA ILE ARG          
SEQRES  14 A  311  ALA HIS TYR GLU GLY ARG SER LEU GLU GLY PHE PRO LYS          
SEQRES  15 A  311  ILE ARG GLU ALA ALA PHE TYR PRO LEU PRO ARG LEU GLU          
SEQRES  16 A  311  LEU LEU ALA LEU SER GLY LEU LEU ARG GLY SER LEU ASP          
SEQRES  17 A  311  SER SER ASP GLY LEU ALA GLU THR LEU TRP GLN LEU ALA          
SEQRES  18 A  311  ASP LEU GLY VAL GLY VAL GLU VAL GLU ALA LEU PRO LEU          
SEQRES  19 A  311  TYR PRO ASP VAL LEU ALA PHE ALA GLY SER GLU GLU ALA          
SEQRES  20 A  311  ALA LEU GLU LEU VAL LEU TYR GLY GLY GLU GLU PHE GLU          
SEQRES  21 A  311  ALA VAL LEU VAL VAL PRO GLN GLU GLY ALA ALA ALA VAL          
SEQRES  22 A  311  GLU ALA ARG ALA LYS ALA LYS GLY LEU PRO LEU PHE ARG          
SEQRES  23 A  311  ALA GLY ARG VAL VAL ALA GLY GLU GLY VAL TYR LEU ARG          
SEQRES  24 A  311  GLY ALA PRO LEU PRO ARG LYS GLY TYR ALA HIS PHE              
SEQRES   1 B  311  MET ARG LEU LYS ASP LEU GLY GLU ARG ALA LEU LEU ALA          
SEQRES   2 B  311  ARG LEU ALA PRO LEU GLY TYR PRO PRO GLU ALA PRO LEU          
SEQRES   3 B  311  PRO PRO GLY ASP ASP ALA GLY GLY VAL TRP ALA GLU GLY          
SEQRES   4 B  311  ARG ALA TRP LEU LEU LYS THR ASP GLY PHE LEU TYR ARG          
SEQRES   5 B  311  GLU VAL ALA LEU LYS GLY MET GLY PRO PHE GLU VAL GLY          
SEQRES   6 B  311  PHE ARG GLY VAL ALA ALA THR ALA SER ASP LEU LEU ALA          
SEQRES   7 B  311  LYS MET GLY ARG PRO LEU GLY PHE THR LEU GLY LEU PHE          
SEQRES   8 B  311  LEU PRO GLU ASP LEU GLU GLU GLY PHE VAL LEU GLU LEU          
SEQRES   9 B  311  VAL ARG GLY ALA ALA GLU ALA ALA LYS ARG LEU GLY ALA          
SEQRES  10 B  311  PHE LEU LEU GLY GLY ASP THR ASN ARG GLY VAL GLU VAL          
SEQRES  11 B  311  ALA LEU THR VAL SER GLY TYR ALA LEU ALA GLU ALA PRO          
SEQRES  12 B  311  LEU PRO ARG LYS ALA LEU PRO GLY ASP LEU LEU TYR LEU          
SEQRES  13 B  311  ALA GLY ASP ARG TRP GLY ARG THR GLY ALA ALA ILE ARG          
SEQRES  14 B  311  ALA HIS TYR GLU GLY ARG SER LEU GLU GLY PHE PRO LYS          
SEQRES  15 B  311  ILE ARG GLU ALA ALA PHE TYR PRO LEU PRO ARG LEU GLU          
SEQRES  16 B  311  LEU LEU ALA LEU SER GLY LEU LEU ARG GLY SER LEU ASP          
SEQRES  17 B  311  SER SER ASP GLY LEU ALA GLU THR LEU TRP GLN LEU ALA          
SEQRES  18 B  311  ASP LEU GLY VAL GLY VAL GLU VAL GLU ALA LEU PRO LEU          
SEQRES  19 B  311  TYR PRO ASP VAL LEU ALA PHE ALA GLY SER GLU GLU ALA          
SEQRES  20 B  311  ALA LEU GLU LEU VAL LEU TYR GLY GLY GLU GLU PHE GLU          
SEQRES  21 B  311  ALA VAL LEU VAL VAL PRO GLN GLU GLY ALA ALA ALA VAL          
SEQRES  22 B  311  GLU ALA ARG ALA LYS ALA LYS GLY LEU PRO LEU PHE ARG          
SEQRES  23 B  311  ALA GLY ARG VAL VAL ALA GLY GLU GLY VAL TYR LEU ARG          
SEQRES  24 B  311  GLY ALA PRO LEU PRO ARG LYS GLY TYR ALA HIS PHE              
SEQRES   1 C  311  MET ARG LEU LYS ASP LEU GLY GLU ARG ALA LEU LEU ALA          
SEQRES   2 C  311  ARG LEU ALA PRO LEU GLY TYR PRO PRO GLU ALA PRO LEU          
SEQRES   3 C  311  PRO PRO GLY ASP ASP ALA GLY GLY VAL TRP ALA GLU GLY          
SEQRES   4 C  311  ARG ALA TRP LEU LEU LYS THR ASP GLY PHE LEU TYR ARG          
SEQRES   5 C  311  GLU VAL ALA LEU LYS GLY MET GLY PRO PHE GLU VAL GLY          
SEQRES   6 C  311  PHE ARG GLY VAL ALA ALA THR ALA SER ASP LEU LEU ALA          
SEQRES   7 C  311  LYS MET GLY ARG PRO LEU GLY PHE THR LEU GLY LEU PHE          
SEQRES   8 C  311  LEU PRO GLU ASP LEU GLU GLU GLY PHE VAL LEU GLU LEU          
SEQRES   9 C  311  VAL ARG GLY ALA ALA GLU ALA ALA LYS ARG LEU GLY ALA          
SEQRES  10 C  311  PHE LEU LEU GLY GLY ASP THR ASN ARG GLY VAL GLU VAL          
SEQRES  11 C  311  ALA LEU THR VAL SER GLY TYR ALA LEU ALA GLU ALA PRO          
SEQRES  12 C  311  LEU PRO ARG LYS ALA LEU PRO GLY ASP LEU LEU TYR LEU          
SEQRES  13 C  311  ALA GLY ASP ARG TRP GLY ARG THR GLY ALA ALA ILE ARG          
SEQRES  14 C  311  ALA HIS TYR GLU GLY ARG SER LEU GLU GLY PHE PRO LYS          
SEQRES  15 C  311  ILE ARG GLU ALA ALA PHE TYR PRO LEU PRO ARG LEU GLU          
SEQRES  16 C  311  LEU LEU ALA LEU SER GLY LEU LEU ARG GLY SER LEU ASP          
SEQRES  17 C  311  SER SER ASP GLY LEU ALA GLU THR LEU TRP GLN LEU ALA          
SEQRES  18 C  311  ASP LEU GLY VAL GLY VAL GLU VAL GLU ALA LEU PRO LEU          
SEQRES  19 C  311  TYR PRO ASP VAL LEU ALA PHE ALA GLY SER GLU GLU ALA          
SEQRES  20 C  311  ALA LEU GLU LEU VAL LEU TYR GLY GLY GLU GLU PHE GLU          
SEQRES  21 C  311  ALA VAL LEU VAL VAL PRO GLN GLU GLY ALA ALA ALA VAL          
SEQRES  22 C  311  GLU ALA ARG ALA LYS ALA LYS GLY LEU PRO LEU PHE ARG          
SEQRES  23 C  311  ALA GLY ARG VAL VAL ALA GLY GLU GLY VAL TYR LEU ARG          
SEQRES  24 C  311  GLY ALA PRO LEU PRO ARG LYS GLY TYR ALA HIS PHE              
SEQRES   1 D  311  MET ARG LEU LYS ASP LEU GLY GLU ARG ALA LEU LEU ALA          
SEQRES   2 D  311  ARG LEU ALA PRO LEU GLY TYR PRO PRO GLU ALA PRO LEU          
SEQRES   3 D  311  PRO PRO GLY ASP ASP ALA GLY GLY VAL TRP ALA GLU GLY          
SEQRES   4 D  311  ARG ALA TRP LEU LEU LYS THR ASP GLY PHE LEU TYR ARG          
SEQRES   5 D  311  GLU VAL ALA LEU LYS GLY MET GLY PRO PHE GLU VAL GLY          
SEQRES   6 D  311  PHE ARG GLY VAL ALA ALA THR ALA SER ASP LEU LEU ALA          
SEQRES   7 D  311  LYS MET GLY ARG PRO LEU GLY PHE THR LEU GLY LEU PHE          
SEQRES   8 D  311  LEU PRO GLU ASP LEU GLU GLU GLY PHE VAL LEU GLU LEU          
SEQRES   9 D  311  VAL ARG GLY ALA ALA GLU ALA ALA LYS ARG LEU GLY ALA          
SEQRES  10 D  311  PHE LEU LEU GLY GLY ASP THR ASN ARG GLY VAL GLU VAL          
SEQRES  11 D  311  ALA LEU THR VAL SER GLY TYR ALA LEU ALA GLU ALA PRO          
SEQRES  12 D  311  LEU PRO ARG LYS ALA LEU PRO GLY ASP LEU LEU TYR LEU          
SEQRES  13 D  311  ALA GLY ASP ARG TRP GLY ARG THR GLY ALA ALA ILE ARG          
SEQRES  14 D  311  ALA HIS TYR GLU GLY ARG SER LEU GLU GLY PHE PRO LYS          
SEQRES  15 D  311  ILE ARG GLU ALA ALA PHE TYR PRO LEU PRO ARG LEU GLU          
SEQRES  16 D  311  LEU LEU ALA LEU SER GLY LEU LEU ARG GLY SER LEU ASP          
SEQRES  17 D  311  SER SER ASP GLY LEU ALA GLU THR LEU TRP GLN LEU ALA          
SEQRES  18 D  311  ASP LEU GLY VAL GLY VAL GLU VAL GLU ALA LEU PRO LEU          
SEQRES  19 D  311  TYR PRO ASP VAL LEU ALA PHE ALA GLY SER GLU GLU ALA          
SEQRES  20 D  311  ALA LEU GLU LEU VAL LEU TYR GLY GLY GLU GLU PHE GLU          
SEQRES  21 D  311  ALA VAL LEU VAL VAL PRO GLN GLU GLY ALA ALA ALA VAL          
SEQRES  22 D  311  GLU ALA ARG ALA LYS ALA LYS GLY LEU PRO LEU PHE ARG          
SEQRES  23 D  311  ALA GLY ARG VAL VAL ALA GLY GLU GLY VAL TYR LEU ARG          
SEQRES  24 D  311  GLY ALA PRO LEU PRO ARG LYS GLY TYR ALA HIS PHE              
FORMUL   5  HOH   *418(H2 O)                                                    
HELIX    1   1 ARG A    2  GLY A    7  1                                   6    
HELIX    2   2 GLY A    7  ALA A   16  1                                  10    
HELIX    3   3 TYR A   51  ALA A   55  1                                   5    
HELIX    4   4 GLY A   60  LYS A   79  1                                  20    
HELIX    5   5 GLU A   97  LEU A  115  1                                  19    
HELIX    6   6 GLY A  162  GLY A  174  1                                  13    
HELIX    7   7 PHE A  180  TYR A  189  1                                  10    
HELIX    8   8 ARG A  193  SER A  200  5                                   8    
HELIX    9   9 GLY A  212  ASP A  222  1                                  11    
HELIX   10  10 TYR A  235  GLY A  243  1                                   9    
HELIX   11  11 SER A  244  TYR A  254  1                                  11    
HELIX   12  12 GLY A  269  LYS A  280  1                                  12    
HELIX   13  13 ARG B    2  GLY B    7  1                                   6    
HELIX   14  14 GLY B    7  ALA B   16  1                                  10    
HELIX   15  15 TYR B   51  ALA B   55  1                                   5    
HELIX   16  16 GLY B   60  LYS B   79  1                                  20    
HELIX   17  17 GLU B   97  LEU B  115  1                                  19    
HELIX   18  18 GLY B  162  GLY B  174  1                                  13    
HELIX   19  19 PHE B  180  TYR B  189  1                                  10    
HELIX   20  20 ARG B  193  SER B  200  5                                   8    
HELIX   21  21 GLY B  212  ASP B  222  1                                  11    
HELIX   22  22 TYR B  235  GLY B  243  1                                   9    
HELIX   23  23 SER B  244  TYR B  254  1                                  11    
HELIX   24  24 PRO B  266  LYS B  280  1                                  15    
HELIX   25  25 ARG C    2  GLY C    7  1                                   6    
HELIX   26  26 GLY C    7  ALA C   16  1                                  10    
HELIX   27  27 TYR C   51  ALA C   55  1                                   5    
HELIX   28  28 GLY C   60  LYS C   79  1                                  20    
HELIX   29  29 GLU C   97  LEU C  115  1                                  19    
HELIX   30  30 GLY C  162  GLY C  174  1                                  13    
HELIX   31  31 PHE C  180  TYR C  189  1                                  10    
HELIX   32  32 ARG C  193  SER C  200  5                                   8    
HELIX   33  33 GLY C  212  ASP C  222  1                                  11    
HELIX   34  34 TYR C  235  GLY C  243  1                                   9    
HELIX   35  35 SER C  244  TYR C  254  1                                  11    
HELIX   36  36 PRO C  266  GLU C  268  5                                   3    
HELIX   37  37 GLY C  269  GLY C  281  1                                  13    
HELIX   38  38 ARG D    2  GLY D    7  1                                   6    
HELIX   39  39 GLY D    7  ALA D   16  1                                  10    
HELIX   40  40 TYR D   51  ALA D   55  1                                   5    
HELIX   41  41 GLY D   60  LYS D   79  1                                  20    
HELIX   42  42 GLU D   97  LEU D  115  1                                  19    
HELIX   43  43 GLY D  162  GLY D  174  1                                  13    
HELIX   44  44 PHE D  180  TYR D  189  1                                  10    
HELIX   45  45 ARG D  193  SER D  200  5                                   8    
HELIX   46  46 GLY D  212  ASP D  222  1                                  11    
HELIX   47  47 TYR D  235  GLY D  243  1                                   9    
HELIX   48  48 SER D  244  TYR D  254  1                                  11    
HELIX   49  49 GLU D  268  GLY D  281  1                                  14    
SHEET    1   A 5 GLY A  33  ALA A  37  0                                        
SHEET    2   A 5 ARG A  40  LEU A  50 -1  O  ARG A  40   N  ALA A  37           
SHEET    3   A 5 ALA A 131  ALA A 140 -1  O  VAL A 134   N  ASP A  47           
SHEET    4   A 5 GLY A  81  LEU A  92 -1  N  LEU A  84   O  TYR A 137           
SHEET    5   A 5 PHE A 118  ARG A 126  1  O  LEU A 120   N  PHE A  86           
SHEET    1   B 7 GLY A 205  SER A 209  0                                        
SHEET    2   B 7 GLU A 260  VAL A 265 -1  O  VAL A 262   N  LEU A 207           
SHEET    3   B 7 LEU A 153  ALA A 157 -1  N  LEU A 153   O  VAL A 265           
SHEET    4   B 7 LEU A 284  VAL A 291 -1  O  PHE A 285   N  LEU A 156           
SHEET    5   B 7 GLY A 226  VAL A 229 -1  N  GLY A 226   O  VAL A 291           
SHEET    6   B 7 VAL A 296  LEU A 298  1  O  TYR A 297   N  VAL A 229           
SHEET    7   B 7 ALA A 301  PRO A 302 -1  O  ALA A 301   N  LEU A 298           
SHEET    1   C 5 GLY B  33  TRP B  36  0                                        
SHEET    2   C 5 ALA B  41  LEU B  50 -1  O  TRP B  42   N  VAL B  35           
SHEET    3   C 5 ALA B 131  ALA B 140 -1  O  VAL B 134   N  ASP B  47           
SHEET    4   C 5 ARG B  82  LEU B  92 -1  N  THR B  87   O  SER B 135           
SHEET    5   C 5 PHE B 118  ARG B 126  1  O  ASN B 125   N  LEU B  92           
SHEET    1   D 7 GLY B 205  SER B 209  0                                        
SHEET    2   D 7 GLU B 260  VAL B 265 -1  O  VAL B 262   N  LEU B 207           
SHEET    3   D 7 LEU B 153  ALA B 157 -1  N  LEU B 153   O  VAL B 265           
SHEET    4   D 7 LEU B 284  VAL B 291 -1  O  GLY B 288   N  LEU B 154           
SHEET    5   D 7 GLY B 226  VAL B 229 -1  N  GLY B 226   O  VAL B 291           
SHEET    6   D 7 VAL B 296  LEU B 298  1  O  TYR B 297   N  VAL B 229           
SHEET    7   D 7 ALA B 301  PRO B 302 -1  O  ALA B 301   N  LEU B 298           
SHEET    1   E 5 GLY C  33  ALA C  37  0                                        
SHEET    2   E 5 ARG C  40  LEU C  50 -1  O  ARG C  40   N  ALA C  37           
SHEET    3   E 5 ALA C 131  ALA C 140 -1  O  VAL C 134   N  ASP C  47           
SHEET    4   E 5 ARG C  82  LEU C  92 -1  N  PHE C  91   O  ALA C 131           
SHEET    5   E 5 PHE C 118  ARG C 126  1  O  ASN C 125   N  LEU C  92           
SHEET    1   F 7 GLY C 205  SER C 209  0                                        
SHEET    2   F 7 GLU C 260  VAL C 265 -1  O  VAL C 262   N  LEU C 207           
SHEET    3   F 7 LEU C 153  ALA C 157 -1  N  LEU C 153   O  VAL C 265           
SHEET    4   F 7 LEU C 284  VAL C 291 -1  O  PHE C 285   N  LEU C 156           
SHEET    5   F 7 GLY C 226  VAL C 229 -1  N  GLY C 226   O  VAL C 291           
SHEET    6   F 7 VAL C 296  LEU C 298  1  O  TYR C 297   N  VAL C 229           
SHEET    7   F 7 ALA C 301  PRO C 302 -1  O  ALA C 301   N  LEU C 298           
SHEET    1   G 5 GLY D  33  ALA D  37  0                                        
SHEET    2   G 5 ARG D  40  LEU D  50 -1  O  ARG D  40   N  ALA D  37           
SHEET    3   G 5 ALA D 131  ALA D 140 -1  O  ALA D 140   N  ALA D  41           
SHEET    4   G 5 ARG D  82  LEU D  92 -1  N  GLY D  89   O  THR D 133           
SHEET    5   G 5 LEU D 119  ARG D 126  1  O  LEU D 120   N  PHE D  86           
SHEET    1   H 7 GLY D 205  SER D 209  0                                        
SHEET    2   H 7 GLU D 260  VAL D 265 -1  O  VAL D 262   N  LEU D 207           
SHEET    3   H 7 LEU D 153  ALA D 157 -1  N  LEU D 153   O  VAL D 265           
SHEET    4   H 7 LEU D 284  VAL D 291 -1  O  ALA D 287   N  LEU D 154           
SHEET    5   H 7 GLY D 226  VAL D 229 -1  N  GLU D 228   O  ARG D 289           
SHEET    6   H 7 GLY D 295  LEU D 298  1  O  TYR D 297   N  VAL D 229           
SHEET    7   H 7 ALA D 301  PRO D 302 -1  O  ALA D 301   N  LEU D 298           
CRYST1  141.564   52.190  181.124  90.00 108.33  90.00 C 1 2 1      16          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.007064  0.000000  0.002340        0.00000                         
SCALE2      0.000000  0.019161  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.005816        0.00000                         
(ATOM LINES ARE NOT SHOWN.)
END                                                                             
DBGET integrated database retrieval system