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Database: PDB
Entry: 2Z1V
LinkDB: 2Z1V
Original site: 2Z1V 
HEADER    TRANSFERASE                             15-MAY-07   2Z1V              
TITLE     TRNA GUANINE TRANSGLYCOSYLASE E235Q MUTANT APO STRUCTURE, PH 8.5      
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: QUEUINE TRNA-RIBOSYLTRANSFERASE;                           
COMPND   3 CHAIN: A;                                                            
COMPND   4 SYNONYM: TRNA-GUANINE TRANSGLYCOSYLASE, GUANINE INSERTION ENZYME,    
COMPND   5 TGT;                                                                 
COMPND   6 EC: 2.4.2.29;                                                        
COMPND   7 ENGINEERED: YES;                                                     
COMPND   8 MUTATION: YES                                                        
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: ZYMOMONAS MOBILIS;                              
SOURCE   3 ORGANISM_TAXID: 542;                                                 
SOURCE   4 GENE: TGT;                                                           
SOURCE   5 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   6 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS;                            
SOURCE   8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE   9 EXPRESSION_SYSTEM_PLASMID: PET9D                                     
KEYWDS    TRNA GUANINE TRANSGLYCOSYLASE, TGT, E235Q MUTANT, APO, PH 8.5,        
KEYWDS   2 TRANSFERASE                                                          
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    N.TIDTEN,B.STENGL,A.HEINE,G.A.GARCIA,G.KLEBE,K.REUTER                 
REVDAT   6   01-NOV-23 2Z1V    1       REMARK                                   
REVDAT   5   10-NOV-21 2Z1V    1       REMARK SEQADV LINK                       
REVDAT   4   13-JUL-11 2Z1V    1       VERSN                                    
REVDAT   3   24-FEB-09 2Z1V    1       VERSN                                    
REVDAT   2   13-NOV-07 2Z1V    1       JRNL                                     
REVDAT   1   06-NOV-07 2Z1V    0                                                
JRNL        AUTH   N.TIDTEN,B.STENGL,A.HEINE,G.A.GARCIA,G.KLEBE,K.REUTER        
JRNL        TITL   GLUTAMATE VERSUS GLUTAMINE EXCHANGE SWAPS SUBSTRATE          
JRNL        TITL 2 SELECTIVITY IN TRNA-GUANINE TRANSGLYCOSYLASE: INSIGHT INTO   
JRNL        TITL 3 THE REGULATION OF SUBSTRATE SELECTIVITY BY KINETIC AND       
JRNL        TITL 4 CRYSTALLOGRAPHIC STUDIES                                     
JRNL        REF    J.MOL.BIOL.                   V. 374   764 2007              
JRNL        REFN                   ISSN 0022-2836                               
JRNL        PMID   17949745                                                     
JRNL        DOI    10.1016/J.JMB.2007.09.062                                    
REMARK   2                                                                      
REMARK   2 RESOLUTION.    1.55 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : SHELXL-97                                            
REMARK   3   AUTHORS     : G.M.SHELDRICK                                        
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 20.00                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : NULL                           
REMARK   3   COMPLETENESS FOR RANGE        (%) : 95.6                           
REMARK   3   CROSS-VALIDATION METHOD           : FREE R                         
REMARK   3   FREE R VALUE TEST SET SELECTION   : RANDOM                         
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT (NO CUTOFF).                         
REMARK   3   R VALUE   (WORKING + TEST SET, NO CUTOFF) : 0.144                  
REMARK   3   R VALUE          (WORKING SET, NO CUTOFF) : 0.143                  
REMARK   3   FREE R VALUE                  (NO CUTOFF) : 0.203                  
REMARK   3   FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : 5.000                  
REMARK   3   FREE R VALUE TEST SET COUNT   (NO CUTOFF) : NULL                   
REMARK   3   TOTAL NUMBER OF REFLECTIONS   (NO CUTOFF) : NULL                   
REMARK   3                                                                      
REMARK   3  FIT/AGREEMENT OF MODEL FOR DATA WITH F>4SIG(F).                     
REMARK   3   R VALUE   (WORKING + TEST SET, F>4SIG(F)) : 0.143                  
REMARK   3   R VALUE          (WORKING SET, F>4SIG(F)) : 0.141                  
REMARK   3   FREE R VALUE                  (F>4SIG(F)) : 0.199                  
REMARK   3   FREE R VALUE TEST SET SIZE (%, F>4SIG(F)) : NULL                   
REMARK   3   FREE R VALUE TEST SET COUNT   (F>4SIG(F)) : NULL                   
REMARK   3   TOTAL NUMBER OF REFLECTIONS   (F>4SIG(F)) : 49614                  
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS      : 2859                                          
REMARK   3   NUCLEIC ACID ATOMS : 0                                             
REMARK   3   HETEROGEN ATOMS    : 25                                            
REMARK   3   SOLVENT ATOMS      : 305                                           
REMARK   3                                                                      
REMARK   3  MODEL REFINEMENT.                                                   
REMARK   3   OCCUPANCY SUM OF NON-HYDROGEN ATOMS      : 3205.5                  
REMARK   3   OCCUPANCY SUM OF HYDROGEN ATOMS          : 2823.0                  
REMARK   3   NUMBER OF DISCRETELY DISORDERED RESIDUES : 7                       
REMARK   3   NUMBER OF LEAST-SQUARES PARAMETERS       : 29142                   
REMARK   3   NUMBER OF RESTRAINTS                     : 36058                   
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM RESTRAINT TARGET VALUES.                        
REMARK   3   BOND LENGTHS                         (A) : 0.010                   
REMARK   3   ANGLE DISTANCES                      (A) : 0.028                   
REMARK   3   SIMILAR DISTANCES (NO TARGET VALUES) (A) : 0.000                   
REMARK   3   DISTANCES FROM RESTRAINT PLANES      (A) : 0.025                   
REMARK   3   ZERO CHIRAL VOLUMES               (A**3) : 0.053                   
REMARK   3   NON-ZERO CHIRAL VOLUMES           (A**3) : 0.053                   
REMARK   3   ANTI-BUMPING DISTANCE RESTRAINTS     (A) : 0.029                   
REMARK   3   RIGID-BOND ADP COMPONENTS         (A**2) : 0.003                   
REMARK   3   SIMILAR ADP COMPONENTS            (A**2) : 0.051                   
REMARK   3   APPROXIMATELY ISOTROPIC ADPS      (A**2) : 0.072                   
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELING.                                              
REMARK   3   METHOD USED: BABINET (SWAT)                                        
REMARK   3                                                                      
REMARK   3  STEREOCHEMISTRY TARGET VALUES : ENGH & HUBER                        
REMARK   3   SPECIAL CASE: NULL                                                 
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 2Z1V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 18-MAY-07.                  
REMARK 100 THE DEPOSITION ID IS D_1000027415.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 12-JUL-06                          
REMARK 200  TEMPERATURE           (KELVIN) : 113.0                              
REMARK 200  PH                             : 8.50                               
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : N                                  
REMARK 200  RADIATION SOURCE               : ROTATING ANODE                     
REMARK 200  BEAMLINE                       : NULL                               
REMARK 200  X-RAY GENERATOR MODEL          : RIGAKU                             
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.54178                            
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : IMAGE PLATE                        
REMARK 200  DETECTOR MANUFACTURER          : RIGAKU RAXIS IV++                  
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : HKL-2000                           
REMARK 200  DATA SCALING SOFTWARE          : HKL-2000                           
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 56093                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 1.550                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 20.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : NULL                               
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 95.6                               
REMARK 200  DATA REDUNDANCY                : 2.300                              
REMARK 200  R MERGE                    (I) : 0.05800                            
REMARK 200  R SYM                      (I) : 0.05800                            
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 16.0000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : NULL                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : NULL                               
REMARK 200  DATA REDUNDANCY IN SHELL       : NULL                               
REMARK 200  R MERGE FOR SHELL          (I) : NULL                               
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : NULL                               
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: CNS                                                   
REMARK 200 STARTING MODEL: PDB ENTRY 2OKO                                       
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 49.01                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.41                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 5% PEG 8000, 100MM TRIS/HCL PH 8.5,      
REMARK 280  1MM DTT, 10% DMSO, PH 8.50, VAPOR DIFFUSION, HANGING DROP,          
REMARK 280  TEMPERATURE 291K                                                    
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1                          
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X,Y,-Z                                                 
REMARK 290       3555   X+1/2,Y+1/2,Z                                           
REMARK 290       4555   -X+1/2,Y+1/2,-Z                                         
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000 -1.000000        0.00000            
REMARK 290   SMTRY1   3  1.000000  0.000000  0.000000       45.37850            
REMARK 290   SMTRY2   3  0.000000  1.000000  0.000000       32.58750            
REMARK 290   SMTRY3   3  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   4 -1.000000  0.000000  0.000000       45.37850            
REMARK 290   SMTRY2   4  0.000000  1.000000  0.000000       32.58750            
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC                           
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 350   BIOMT1   2 -1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   2  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   2  0.000000  0.000000 -1.000000        0.00000            
REMARK 375                                                                      
REMARK 375 SPECIAL POSITION                                                     
REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS            
REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL          
REMARK 375 POSITIONS.                                                           
REMARK 375                                                                      
REMARK 375 ATOM RES CSSEQI                                                      
REMARK 375      HOH A 885  LIES ON A SPECIAL POSITION.                          
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     MET A     1                                                      
REMARK 465     VAL A     2                                                      
REMARK 465     GLU A     3                                                      
REMARK 465     ALA A     4                                                      
REMARK 465     THR A     5                                                      
REMARK 465     ALA A     6                                                      
REMARK 465     GLN A     7                                                      
REMARK 465     GLU A     8                                                      
REMARK 465     THR A     9                                                      
REMARK 465     ASP A    10                                                      
REMARK 465     LEU A   128                                                      
REMARK 465     ASP A   129                                                      
REMARK 465     GLY A   130                                                      
REMARK 465     SER A   131                                                      
REMARK 465     ARG A   384                                                      
REMARK 465     ASN A   385                                                      
REMARK 465     SER A   386                                                      
REMARK 470                                                                      
REMARK 470 MISSING ATOM                                                         
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;           
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;          
REMARK 470 I=INSERTION CODE):                                                   
REMARK 470   M RES CSSEQI  ATOMS                                                
REMARK 470     LYS A 116    CG   CD   CE   NZ                                   
REMARK 470     LYS A 125    CG   CD   CE   NZ                                   
REMARK 470     ARG A 132    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     GLU A 220    CG   CD   OE1  OE2                                  
REMARK 470     GLN A 324    CG   CD   OE1  NE2                                  
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500    ARG A  21   CD  -  NE  -  CZ  ANGL. DEV. =   9.2 DEGREES          
REMARK 500    ARG A  21   NE  -  CZ  -  NH2 ANGL. DEV. =  -3.4 DEGREES          
REMARK 500    ARG A  34   NE  -  CZ  -  NH1 ANGL. DEV. =   3.2 DEGREES          
REMARK 500    ARG A  60   NE  -  CZ  -  NH2 ANGL. DEV. =  -3.2 DEGREES          
REMARK 500    GLN A 203   C   -  N   -  CA  ANGL. DEV. =  16.3 DEGREES          
REMARK 500    ARG A 211   NE  -  CZ  -  NH2 ANGL. DEV. =   3.2 DEGREES          
REMARK 500    PHE A 246   CB  -  CG  -  CD1 ANGL. DEV. =   5.3 DEGREES          
REMARK 500    TYR A 258   CB  -  CG  -  CD1 ANGL. DEV. =   3.7 DEGREES          
REMARK 500    ARG A 274   NE  -  CZ  -  NH1 ANGL. DEV. =   3.2 DEGREES          
REMARK 500    ARG A 303   NE  -  CZ  -  NH2 ANGL. DEV. =  -5.0 DEGREES          
REMARK 500    ARG A 336   CD  -  NE  -  CZ  ANGL. DEV. =   9.1 DEGREES          
REMARK 500    ARG A 336   NE  -  CZ  -  NH1 ANGL. DEV. =  -4.8 DEGREES          
REMARK 500    ARG A 362   NE  -  CZ  -  NH1 ANGL. DEV. =   4.7 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    THR A  47      -85.59    -70.46                                   
REMARK 500    ALA A  53       10.82     80.05                                   
REMARK 500    LEU A 114       45.55     39.22                                   
REMARK 500    SER A 205     -133.28     52.33                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 620                                                                      
REMARK 620 METAL COORDINATION                                                   
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):                             
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              ZN A 400  ZN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 CYS A 318   SG                                                     
REMARK 620 2 CYS A 320   SG  105.4                                              
REMARK 620 3 CYS A 323   SG  116.5 117.4                                        
REMARK 620 4 HIS A 349   ND1 103.4 113.2 100.1                                  
REMARK 620 N                    1     2     3                                   
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 400                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 702                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC3                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 704                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC4                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 706                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC5                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 717                 
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 1P0B   RELATED DB: PDB                                   
REMARK 900 WILD TYPE ENZYME                                                     
REMARK 900 RELATED ID: 2OKO   RELATED DB: PDB                                   
REMARK 900 E235Q MUTANT OF THE SAME PROTEIN, APO STRUCTURE AT PH 5.5            
REMARK 900 RELATED ID: 2Z1W   RELATED DB: PDB                                   
REMARK 900 E235Q MUTANT OF THE SAME PROTEIN, IN COMPLEX WITH BDI (2-BUTYL-5,6-  
REMARK 900 DIHYDRO-1H-IMIDAZO[4,5-D]PYRIDAZINE-4,7-DIONE)                       
REMARK 900 RELATED ID: 2Z1X   RELATED DB: PDB                                   
REMARK 900 E235Q MUTANT OF THE SAME PROTEIN, IN COMPLEX WITH PREQ1              
REMARK 999                                                                      
REMARK 999 SEQUENCE                                                             
REMARK 999 THE CONFLICT INVOLVING RESIDUE 312 IS CONSISTENT WITH                
REMARK 999 THE REF. 1 AND 2 IN THE UNIPROT SEQUENCE DATABASE,                   
REMARK 999 TGT_ZYMMO.                                                           
DBREF  2Z1V A    1   386  UNP    P28720   TGT_ZYMMO        1    386             
SEQADV 2Z1V GLN A  235  UNP  P28720    GLU   235 ENGINEERED MUTATION            
SEQADV 2Z1V LYS A  312  UNP  P28720    THR   312 SEE REMARK 999                 
SEQRES   1 A  386  MET VAL GLU ALA THR ALA GLN GLU THR ASP ARG PRO ARG          
SEQRES   2 A  386  PHE SER PHE SER ILE ALA ALA ARG GLU GLY LYS ALA ARG          
SEQRES   3 A  386  THR GLY THR ILE GLU MET LYS ARG GLY VAL ILE ARG THR          
SEQRES   4 A  386  PRO ALA PHE MET PRO VAL GLY THR ALA ALA THR VAL LYS          
SEQRES   5 A  386  ALA LEU LYS PRO GLU THR VAL ARG ALA THR GLY ALA ASP          
SEQRES   6 A  386  ILE ILE LEU GLY ASN THR TYR HIS LEU MET LEU ARG PRO          
SEQRES   7 A  386  GLY ALA GLU ARG ILE ALA LYS LEU GLY GLY LEU HIS SER          
SEQRES   8 A  386  PHE MET GLY TRP ASP ARG PRO ILE LEU THR ASP SER GLY          
SEQRES   9 A  386  GLY TYR GLN VAL MET SER LEU SER SER LEU THR LYS GLN          
SEQRES  10 A  386  SER GLU GLU GLY VAL THR PHE LYS SER HIS LEU ASP GLY          
SEQRES  11 A  386  SER ARG HIS MET LEU SER PRO GLU ARG SER ILE GLU ILE          
SEQRES  12 A  386  GLN HIS LEU LEU GLY SER ASP ILE VAL MET ALA PHE ASP          
SEQRES  13 A  386  GLU CYS THR PRO TYR PRO ALA THR PRO SER ARG ALA ALA          
SEQRES  14 A  386  SER SER MET GLU ARG SER MET ARG TRP ALA LYS ARG SER          
SEQRES  15 A  386  ARG ASP ALA PHE ASP SER ARG LYS GLU GLN ALA GLU ASN          
SEQRES  16 A  386  ALA ALA LEU PHE GLY ILE GLN GLN GLY SER VAL PHE GLU          
SEQRES  17 A  386  ASN LEU ARG GLN GLN SER ALA ASP ALA LEU ALA GLU ILE          
SEQRES  18 A  386  GLY PHE ASP GLY TYR ALA VAL GLY GLY LEU ALA VAL GLY          
SEQRES  19 A  386  GLN GLY GLN ASP GLU MET PHE ARG VAL LEU ASP PHE SER          
SEQRES  20 A  386  VAL PRO MET LEU PRO ASP ASP LYS PRO HIS TYR LEU MET          
SEQRES  21 A  386  GLY VAL GLY LYS PRO ASP ASP ILE VAL GLY ALA VAL GLU          
SEQRES  22 A  386  ARG GLY ILE ASP MET PHE ASP CYS VAL LEU PRO THR ARG          
SEQRES  23 A  386  SER GLY ARG ASN GLY GLN ALA PHE THR TRP ASP GLY PRO          
SEQRES  24 A  386  ILE ASN ILE ARG ASN ALA ARG PHE SER GLU ASP LEU LYS          
SEQRES  25 A  386  PRO LEU ASP SER GLU CYS HIS CYS ALA VAL CYS GLN LYS          
SEQRES  26 A  386  TRP SER ARG ALA TYR ILE HIS HIS LEU ILE ARG ALA GLY          
SEQRES  27 A  386  GLU ILE LEU GLY ALA MET LEU MET THR GLU HIS ASN ILE          
SEQRES  28 A  386  ALA PHE TYR GLN GLN LEU MET GLN LYS ILE ARG ASP SER          
SEQRES  29 A  386  ILE SER GLU GLY ARG PHE SER GLN PHE ALA GLN ASP PHE          
SEQRES  30 A  386  ARG ALA ARG TYR PHE ALA ARG ASN SER                          
HET     ZN  A 400       1                                                       
HET    GOL  A 702       6                                                       
HET    GOL  A 704       6                                                       
HET    GOL  A 706       6                                                       
HET    GOL  A 717       6                                                       
HETNAM      ZN ZINC ION                                                         
HETNAM     GOL GLYCEROL                                                         
HETSYN     GOL GLYCERIN; PROPANE-1,2,3-TRIOL                                    
FORMUL   2   ZN    ZN 2+                                                        
FORMUL   3  GOL    4(C3 H8 O3)                                                  
FORMUL   7  HOH   *305(H2 O)                                                    
HELIX    1   1 LYS A   55  THR A   62  1                                   8    
HELIX    2   2 ASN A   70  ARG A   77  1                                   8    
HELIX    3   3 GLY A   79  LEU A   86  1                                   8    
HELIX    4   4 GLY A   88  GLY A   94  1                                   7    
HELIX    5   5 GLY A  104  SER A  112  1                                   9    
HELIX    6   6 SER A  136  GLY A  148  1                                  13    
HELIX    7   7 THR A  164  ARG A  189  1                                  26    
HELIX    8   8 ARG A  189  ALA A  196  1                                   8    
HELIX    9   9 PHE A  207  GLY A  222  1                                  16    
HELIX   10  10 GLY A  236  VAL A  248  1                                  13    
HELIX   11  11 PRO A  249  LEU A  251  5                                   3    
HELIX   12  12 LYS A  264  GLU A  273  1                                  10    
HELIX   13  13 VAL A  282  GLY A  291  1                                  10    
HELIX   14  14 ASN A  304  SER A  308  5                                   5    
HELIX   15  15 CYS A  320  TRP A  326  1                                   7    
HELIX   16  16 SER A  327  ALA A  337  1                                  11    
HELIX   17  17 GLU A  339  GLU A  367  1                                  29    
HELIX   18  18 ARG A  369  PHE A  382  1                                  14    
SHEET    1   A 3 SER A  15  GLU A  22  0                                        
SHEET    2   A 3 ALA A  25  MET A  32 -1  O  GLU A  31   N  SER A  15           
SHEET    3   A 3 GLY A  35  THR A  39 -1  O  ILE A  37   N  ILE A  30           
SHEET    1   B 9 ALA A  41  MET A  43  0                                        
SHEET    2   B 9 MET A 278  ASP A 280  1  O  PHE A 279   N  MET A  43           
SHEET    3   B 9 HIS A 257  LEU A 259  1  N  LEU A 259   O  MET A 278           
SHEET    4   B 9 GLY A 225  VAL A 228  1  N  VAL A 228   O  TYR A 258           
SHEET    5   B 9 ALA A 197  GLN A 202  1  N  GLN A 202   O  ALA A 227           
SHEET    6   B 9 ILE A 151  MET A 153  1  N  VAL A 152   O  ALA A 197           
SHEET    7   B 9 ILE A  99  THR A 101  1  N  THR A 101   O  ILE A 151           
SHEET    8   B 9 ILE A  67  GLY A  69  1  N  GLY A  69   O  LEU A 100           
SHEET    9   B 9 VAL A  45  GLY A  46  1  N  GLY A  46   O  LEU A  68           
SHEET    1   C 3 SER A 113  SER A 118  0                                        
SHEET    2   C 3 GLY A 121  LYS A 125 -1  O  THR A 123   N  LYS A 116           
SHEET    3   C 3 ARG A 132  LEU A 135 -1  O  HIS A 133   N  PHE A 124           
SHEET    1   D 2 GLN A 292  ALA A 293  0                                        
SHEET    2   D 2 ILE A 300  ASN A 301 -1  O  ILE A 300   N  ALA A 293           
LINK         SG  CYS A 318                ZN    ZN A 400     1555   1555  2.33  
LINK         SG  CYS A 320                ZN    ZN A 400     1555   1555  2.33  
LINK         SG  CYS A 323                ZN    ZN A 400     1555   1555  2.31  
LINK         ND1 HIS A 349                ZN    ZN A 400     1555   1555  2.15  
CISPEP   1 THR A   39    PRO A   40          0        -6.02                     
CISPEP   2 ARG A   77    PRO A   78          0         7.65                     
CISPEP   3 TYR A  161    PRO A  162          0        -6.24                     
CISPEP   4 VAL A  262    GLY A  263          0        -6.94                     
SITE     1 AC1  4 CYS A 318  CYS A 320  CYS A 323  HIS A 349                    
SITE     1 AC2  8 PRO A  56  GLU A  57  GLY A  94  TRP A  95                    
SITE     2 AC2  8 ASP A  96  ARG A  97  HOH A 929  HOH A1001                    
SITE     1 AC3  6 GLN A 117  ARG A 174  PRO A 252  ASP A 254                    
SITE     2 AC3  6 LYS A 255  HOH A 820                                          
SITE     1 AC4  6 GLU A 317  LYS A 360  PHE A 373  ARG A 380                    
SITE     2 AC4  6 HOH A 743  HOH A 922                                          
SITE     1 AC5  6 PRO A 249  MET A 250  LEU A 251  PRO A 252                    
SITE     2 AC5  6 ASP A 253  HOH A 932                                          
CRYST1   90.757   65.175   70.455  90.00  96.12  90.00 C 1 2 1       4          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.011018  0.000000  0.001181        0.00000                         
SCALE2      0.000000  0.015343  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.014275        0.00000                         
(ATOM LINES ARE NOT SHOWN.)
END                                                                             
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