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Database: PDB
Entry: 3KX1
LinkDB: 3KX1
Original site: 3KX1 
HEADER    HYDROLASE                               02-DEC-09   3KX1              
TITLE     CATHEPSIN K IN COMPLEX WITH A SELECTIVE 2-CYANO-PYRIMIDINE INHIBITOR  
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: CATHEPSIN K;                                               
COMPND   3 CHAIN: A;                                                            
COMPND   4 FRAGMENT: UNP RESIDUES 115-329;                                      
COMPND   5 SYNONYM: CATHEPSIN O, CATHEPSIN X, CATHEPSIN O2;                     
COMPND   6 EC: 3.4.22.38;                                                       
COMPND   7 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 EXPRESSION_SYSTEM: CRICETULUS GRISEUS;                               
SOURCE   6 EXPRESSION_SYSTEM_COMMON: CHINESE HAMSTER;                           
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 10029;                                      
SOURCE   8 EXPRESSION_SYSTEM_CELL_LINE: OVARY CELLS                             
KEYWDS    CATHEPSIN K, ENZYME INHIBITOR, COVALENT REVERSIBLE INHIBITOR, DISEASE 
KEYWDS   2 MUTATION, DISULFIDE BOND, GLYCOPROTEIN, HYDROLASE, LYSOSOME,         
KEYWDS   3 PROTEASE, THIOL PROTEASE, ZYMOGEN                                    
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    X.FRADERA,J.C.M.UITDEHAAG,M.VAN ZEELAND                               
REVDAT   3   03-APR-24 3KX1    1       REMARK                                   
REVDAT   2   12-FEB-14 3KX1    1       JRNL   VERSN                             
REVDAT   1   02-MAR-10 3KX1    0                                                
JRNL        AUTH   Z.RANKOVIC,J.CAI,J.KERR,X.FRADERA,J.ROBINSON,A.MISTRY,       
JRNL        AUTH 2 E.HAMILTON,G.MCGARRY,F.ANDREWS,W.CAULFIELD,I.CUMMING,        
JRNL        AUTH 3 M.DEMPSTER,J.WALLER,P.SCULLION,I.MARTIN,A.MITCHELL,C.LONG,   
JRNL        AUTH 4 M.BAUGH,P.WESTWOOD,E.KINGHORN,J.BRUIN,W.HAMILTON,            
JRNL        AUTH 5 J.UITDEHAAG,M.VAN ZEELAND,D.POTIN,L.SANIERE,A.FOUQUET,       
JRNL        AUTH 6 F.CHEVALLIER,H.DERONZIER,C.DORLEANS,E.NICOLAI                
JRNL        TITL   DESIGN AND OPTIMIZATION OF A SERIES OF NOVEL                 
JRNL        TITL 2 2-CYANO-PYRIMIDINES AS CATHEPSIN K INHIBITORS                
JRNL        REF    BIOORG.MED.CHEM.LETT.         V.  20  1524 2010              
JRNL        REFN                   ISSN 0960-894X                               
JRNL        PMID   20149657                                                     
JRNL        DOI    10.1016/J.BMCL.2010.01.100                                   
REMARK   2                                                                      
REMARK   2 RESOLUTION.    1.51 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : REFMAC 5.2.0019                                      
REMARK   3   AUTHORS     : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER,              
REMARK   3               : NICHOLLS,WINN,LONG,VAGIN                             
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : MAXIMUM LIKELIHOOD                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 1.51                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 28.03                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : NULL                           
REMARK   3   COMPLETENESS FOR RANGE        (%) : 70.1                           
REMARK   3   NUMBER OF REFLECTIONS             : 22075                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : THROUGHOUT                      
REMARK   3   FREE R VALUE TEST SET SELECTION  : RANDOM                          
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.243                           
REMARK   3   R VALUE            (WORKING SET) : 0.239                           
REMARK   3   FREE R VALUE                     : 0.306                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 5.000                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 1167                            
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED           : 20                           
REMARK   3   BIN RESOLUTION RANGE HIGH       (A) : 1.51                         
REMARK   3   BIN RESOLUTION RANGE LOW        (A) : 1.55                         
REMARK   3   REFLECTION IN BIN     (WORKING SET) : 157                          
REMARK   3   BIN COMPLETENESS (WORKING+TEST) (%) : 6.78                         
REMARK   3   BIN R VALUE           (WORKING SET) : 0.3900                       
REMARK   3   BIN FREE R VALUE SET COUNT          : 5                            
REMARK   3   BIN FREE R VALUE                    : 0.4250                       
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 1637                                    
REMARK   3   NUCLEIC ACID ATOMS       : 0                                       
REMARK   3   HETEROGEN ATOMS          : 34                                      
REMARK   3   SOLVENT ATOMS            : 203                                     
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : 14.70                          
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 17.27                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : 0.48000                                              
REMARK   3    B22 (A**2) : 0.48000                                              
REMARK   3    B33 (A**2) : -0.97000                                             
REMARK   3    B12 (A**2) : 0.00000                                              
REMARK   3    B13 (A**2) : 0.00000                                              
REMARK   3    B23 (A**2) : 0.00000                                              
REMARK   3                                                                      
REMARK   3  ESTIMATED OVERALL COORDINATE ERROR.                                 
REMARK   3   ESU BASED ON R VALUE                            (A): 0.149         
REMARK   3   ESU BASED ON FREE R VALUE                       (A): 0.155         
REMARK   3   ESU BASED ON MAXIMUM LIKELIHOOD                 (A): 0.115         
REMARK   3   ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.312         
REMARK   3                                                                      
REMARK   3 CORRELATION COEFFICIENTS.                                            
REMARK   3   CORRELATION COEFFICIENT FO-FC      : 0.932                         
REMARK   3   CORRELATION COEFFICIENT FO-FC FREE : 0.894                         
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES        COUNT    RMS    WEIGHT      
REMARK   3   BOND LENGTHS REFINED ATOMS        (A):  1729 ; 0.015 ; 0.022       
REMARK   3   BOND LENGTHS OTHERS               (A):  1194 ; 0.002 ; 0.020       
REMARK   3   BOND ANGLES REFINED ATOMS   (DEGREES):  2337 ; 1.508 ; 1.962       
REMARK   3   BOND ANGLES OTHERS          (DEGREES):  2907 ; 1.003 ; 3.004       
REMARK   3   TORSION ANGLES, PERIOD 1    (DEGREES):   218 ; 6.122 ; 5.000       
REMARK   3   TORSION ANGLES, PERIOD 2    (DEGREES):    79 ;36.128 ;25.190       
REMARK   3   TORSION ANGLES, PERIOD 3    (DEGREES):   289 ;14.360 ;15.000       
REMARK   3   TORSION ANGLES, PERIOD 4    (DEGREES):     7 ; 9.928 ;15.000       
REMARK   3   CHIRAL-CENTER RESTRAINTS       (A**3):   235 ; 0.087 ; 0.200       
REMARK   3   GENERAL PLANES REFINED ATOMS      (A):  1953 ; 0.006 ; 0.020       
REMARK   3   GENERAL PLANES OTHERS             (A):   342 ; 0.003 ; 0.020       
REMARK   3   NON-BONDED CONTACTS REFINED ATOMS (A):   352 ; 0.211 ; 0.200       
REMARK   3   NON-BONDED CONTACTS OTHERS        (A):  1233 ; 0.196 ; 0.200       
REMARK   3   NON-BONDED TORSION REFINED ATOMS  (A):   811 ; 0.174 ; 0.200       
REMARK   3   NON-BONDED TORSION OTHERS         (A):   865 ; 0.085 ; 0.200       
REMARK   3   H-BOND (X...Y) REFINED ATOMS      (A):   146 ; 0.180 ; 0.200       
REMARK   3   H-BOND (X...Y) OTHERS             (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION REFINED ATOMS (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION OTHERS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY VDW REFINED ATOMS        (A):    14 ; 0.205 ; 0.200       
REMARK   3   SYMMETRY VDW OTHERS               (A):    43 ; 0.247 ; 0.200       
REMARK   3   SYMMETRY H-BOND REFINED ATOMS     (A):    14 ; 0.210 ; 0.200       
REMARK   3   SYMMETRY H-BOND OTHERS            (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION REFINED ATOMS  (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION OTHERS         (A):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.     COUNT   RMS    WEIGHT      
REMARK   3   MAIN-CHAIN BOND REFINED ATOMS  (A**2):  1374 ; 0.869 ; 1.500       
REMARK   3   MAIN-CHAIN BOND OTHER ATOMS    (A**2):   447 ; 0.190 ; 1.500       
REMARK   3   MAIN-CHAIN ANGLE REFINED ATOMS (A**2):  1687 ; 1.030 ; 2.000       
REMARK   3   MAIN-CHAIN ANGLE OTHER ATOMS   (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN BOND REFINED ATOMS  (A**2):   812 ; 1.837 ; 3.000       
REMARK   3   SIDE-CHAIN BOND OTHER ATOMS    (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN ANGLE REFINED ATOMS (A**2):   648 ; 2.519 ; 4.500       
REMARK   3   SIDE-CHAIN ANGLE OTHER ATOMS   (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   LONG RANGE B REFINED ATOMS     (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   LONG RANGE B OTHER ATOMS       (A**2):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3 ANISOTROPIC THERMAL FACTOR RESTRAINTS.    COUNT   RMS   WEIGHT       
REMARK   3   RIGID-BOND RESTRAINTS          (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SPHERICITY; FREE ATOMS         (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SPHERICITY; BONDED ATOMS       (A**2):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3  NCS RESTRAINTS STATISTICS                                           
REMARK   3   NUMBER OF DIFFERENT NCS GROUPS : NULL                              
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : NULL                                       
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED : MASK                                                 
REMARK   3   PARAMETERS FOR MASK CALCULATION                                    
REMARK   3   VDW PROBE RADIUS   : 1.40                                          
REMARK   3   ION PROBE RADIUS   : 0.80                                          
REMARK   3   SHRINKAGE RADIUS   : 0.80                                          
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING   
REMARK   3  POSITIONS                                                           
REMARK   4                                                                      
REMARK   4 3KX1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-DEC-09.                  
REMARK 100 THE DEPOSITION ID IS D_1000056553.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 15-MAR-05                          
REMARK 200  TEMPERATURE           (KELVIN) : NULL                               
REMARK 200  PH                             : 2.9                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : ESRF                               
REMARK 200  BEAMLINE                       : ID14-2                             
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 0.933                              
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : ADSC QUANTUM 4                     
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : CRYSTALCLEAR                       
REMARK 200  DATA SCALING SOFTWARE          : CRYSTALCLEAR                       
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 23303                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 1.510                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 37.890                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : 0.000                              
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 70.3                               
REMARK 200  DATA REDUNDANCY                : 2.790                              
REMARK 200  R MERGE                    (I) : 0.10100                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 6.7000                             
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.51                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 1.56                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 9.2                                
REMARK 200  DATA REDUNDANCY IN SHELL       : 1.13                               
REMARK 200  R MERGE FOR SHELL          (I) : 0.10100                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 0.700                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: NULL                                                  
REMARK 200 STARTING MODEL: IN-HOUSE CATHEPSIN K STRUCTURE                       
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 42.85                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 34% PEG 4000, 0.2M AMMONIUM SULPHATE     
REMARK 280  PH 2.9, 4% METHANOL , VAPOR DIFFUSION, HANGING DROP                 
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2                        
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X,-Y,Z+1/2                                             
REMARK 290       3555   -Y+1/2,X+1/2,Z+3/4                                      
REMARK 290       4555   Y+1/2,-X+1/2,Z+1/4                                      
REMARK 290       5555   -X+1/2,Y+1/2,-Z+3/4                                     
REMARK 290       6555   X+1/2,-Y+1/2,-Z+1/4                                     
REMARK 290       7555   Y,X,-Z                                                  
REMARK 290       8555   -Y,-X,-Z+1/2                                            
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       64.41450            
REMARK 290   SMTRY1   3  0.000000 -1.000000  0.000000       28.03450            
REMARK 290   SMTRY2   3  1.000000  0.000000  0.000000       28.03450            
REMARK 290   SMTRY3   3  0.000000  0.000000  1.000000       96.62175            
REMARK 290   SMTRY1   4  0.000000  1.000000  0.000000       28.03450            
REMARK 290   SMTRY2   4 -1.000000  0.000000  0.000000       28.03450            
REMARK 290   SMTRY3   4  0.000000  0.000000  1.000000       32.20725            
REMARK 290   SMTRY1   5 -1.000000  0.000000  0.000000       28.03450            
REMARK 290   SMTRY2   5  0.000000  1.000000  0.000000       28.03450            
REMARK 290   SMTRY3   5  0.000000  0.000000 -1.000000       96.62175            
REMARK 290   SMTRY1   6  1.000000  0.000000  0.000000       28.03450            
REMARK 290   SMTRY2   6  0.000000 -1.000000  0.000000       28.03450            
REMARK 290   SMTRY3   6  0.000000  0.000000 -1.000000       32.20725            
REMARK 290   SMTRY1   7  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY2   7  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY3   7  0.000000  0.000000 -1.000000        0.00000            
REMARK 290   SMTRY1   8  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY2   8 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY3   8  0.000000  0.000000 -1.000000       64.41450            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC                  
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     ALA A     1                                                      
REMARK 465     PRO A     2                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    GLN A  21       50.20    -95.18                                   
REMARK 500    SER A 146      -43.84   -130.89                                   
REMARK 500    ASN A 159       70.21   -116.07                                   
REMARK 500    LYS A 200       57.74   -112.46                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE KX1 A 216                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 217                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC3                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 218                 
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 3KWZ   RELATED DB: PDB                                   
REMARK 900 SIMLAR 2-CYANO-PYRIMIDINE INHIBITOR DESCRIBED IN SAME REFERENCE      
DBREF  3KX1 A    1   215  UNP    P43235   CATK_HUMAN     115    329             
SEQRES   1 A  215  ALA PRO ASP SER VAL ASP TYR ARG LYS LYS GLY TYR VAL          
SEQRES   2 A  215  THR PRO VAL LYS ASN GLN GLY GLN CYS GLY SER CYS TRP          
SEQRES   3 A  215  ALA PHE SER SER VAL GLY ALA LEU GLU GLY GLN LEU LYS          
SEQRES   4 A  215  LYS LYS THR GLY LYS LEU LEU ASN LEU SER PRO GLN ASN          
SEQRES   5 A  215  LEU VAL ASP CYS VAL SER GLU ASN ASP GLY CYS GLY GLY          
SEQRES   6 A  215  GLY TYR MET THR ASN ALA PHE GLN TYR VAL GLN LYS ASN          
SEQRES   7 A  215  ARG GLY ILE ASP SER GLU ASP ALA TYR PRO TYR VAL GLY          
SEQRES   8 A  215  GLN GLU GLU SER CYS MET TYR ASN PRO THR GLY LYS ALA          
SEQRES   9 A  215  ALA LYS CYS ARG GLY TYR ARG GLU ILE PRO GLU GLY ASN          
SEQRES  10 A  215  GLU LYS ALA LEU LYS ARG ALA VAL ALA ARG VAL GLY PRO          
SEQRES  11 A  215  VAL SER VAL ALA ILE ASP ALA SER LEU THR SER PHE GLN          
SEQRES  12 A  215  PHE TYR SER LYS GLY VAL TYR TYR ASP GLU SER CYS ASN          
SEQRES  13 A  215  SER ASP ASN LEU ASN HIS ALA VAL LEU ALA VAL GLY TYR          
SEQRES  14 A  215  GLY ILE GLN LYS GLY ASN LYS HIS TRP ILE ILE LYS ASN          
SEQRES  15 A  215  SER TRP GLY GLU ASN TRP GLY ASN LYS GLY TYR ILE LEU          
SEQRES  16 A  215  MET ALA ARG ASN LYS ASN ASN ALA CYS GLY ILE ALA ASN          
SEQRES  17 A  215  LEU ALA SER PHE PRO LYS MET                                  
HET    KX1  A 216      24                                                       
HET    SO4  A 217       5                                                       
HET    SO4  A 218       5                                                       
HETNAM     KX1 4-CYCLOHEPTYL-6-(3-PIPERIDIN-1-YLPROPYL)PYRIMIDINE-2-            
HETNAM   2 KX1  CARBONITRILE                                                    
HETNAM     SO4 SULFATE ION                                                      
FORMUL   2  KX1    C20 H30 N4                                                   
FORMUL   3  SO4    2(O4 S 2-)                                                   
FORMUL   5  HOH   *203(H2 O)                                                    
HELIX    1   1 ARG A    8  GLY A   11  5                                   4    
HELIX    2   2 SER A   24  GLY A   43  1                                  20    
HELIX    3   3 SER A   49  VAL A   57  1                                   9    
HELIX    4   4 ASP A   61  GLY A   65  5                                   5    
HELIX    5   5 TYR A   67  ARG A   79  1                                  13    
HELIX    6   6 ASN A   99  THR A  101  5                                   3    
HELIX    7   7 ASN A  117  VAL A  128  1                                  12    
HELIX    8   8 LEU A  139  PHE A  144  1                                   6    
HELIX    9   9 ASN A  202  ILE A  206  5                                   5    
SHEET    1   A 3 VAL A   5  ASP A   6  0                                        
SHEET    2   A 3 HIS A 162  GLN A 172 -1  O  TYR A 169   N  VAL A   5           
SHEET    3   A 3 VAL A 131  ILE A 135 -1  N  ILE A 135   O  HIS A 162           
SHEET    1   B 5 VAL A   5  ASP A   6  0                                        
SHEET    2   B 5 HIS A 162  GLN A 172 -1  O  TYR A 169   N  VAL A   5           
SHEET    3   B 5 ASN A 175  LYS A 181 -1  O  LYS A 181   N  LEU A 165           
SHEET    4   B 5 TYR A 193  ALA A 197 -1  O  ILE A 194   N  ILE A 180           
SHEET    5   B 5 VAL A 149  TYR A 150  1  N  TYR A 150   O  LEU A 195           
SHEET    1   C 2 ILE A  81  ASP A  82  0                                        
SHEET    2   C 2 LYS A 103  ALA A 105 -1  O  ALA A 104   N  ILE A  81           
SHEET    1   D 2 TYR A 110  GLU A 112  0                                        
SHEET    2   D 2 SER A 211  PRO A 213 -1  O  PHE A 212   N  ARG A 111           
SSBOND   1 CYS A   22    CYS A   63                          1555   1555  2.05  
SSBOND   2 CYS A   56    CYS A   96                          1555   1555  2.03  
SSBOND   3 CYS A  155    CYS A  204                          1555   1555  2.05  
SITE     1 AC1  9 GLN A  19  GLY A  23  CYS A  25  LYS A  44                    
SITE     2 AC1  9 GLY A  64  GLY A  65  GLY A  66  ASN A 161                    
SITE     3 AC1  9 HIS A 162                                                     
SITE     1 AC2  8 ASN A  18  ARG A 111  GLY A 185  GLU A 186                    
SITE     2 AC2  8 ASN A 187  LYS A 214  HOH A 375  HOH A 408                    
SITE     1 AC3  5 ASP A   3  LEU A 139  THR A 140  SER A 141                    
SITE     2 AC3  5 HOH A 369                                                     
CRYST1   56.069   56.069  128.829  90.00  90.00  90.00 P 43 21 2     8          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.017835  0.000000  0.000000        0.00000                         
SCALE2      0.000000  0.017835  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.007762        0.00000                         
(ATOM LINES ARE NOT SHOWN.)
END                                                                             
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