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Database: PDB
Entry: 3SKD
LinkDB: 3SKD
Original site: 3SKD 
HEADER    HYDROLASE                               22-JUN-11   3SKD              
TITLE     CRYSTAL STRUCTURE OF THE THERMUS THERMOPHILUS CAS3 HD DOMAIN IN THE   
TITLE    2 PRESENCE OF NI2+                                                     
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: PUTATIVE UNCHARACTERIZED PROTEIN TTHB187;                  
COMPND   3 CHAIN: A;                                                            
COMPND   4 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS HB8;                       
SOURCE   3 ORGANISM_TAXID: 300852;                                              
SOURCE   4 STRAIN: HB8;                                                         
SOURCE   5 GENE: TTHB187;                                                       
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   8 EXPRESSION_SYSTEM_STRAIN: T7EXPRESS;                                 
SOURCE   9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE  10 EXPRESSION_SYSTEM_PLASMID: PHAT2                                     
KEYWDS    CRISPR, CAS, HD DOMAIN, NUCLEASE, HYDROLASE                           
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    S.BAILEY,S.MULEPATI                                                   
REVDAT   5   28-FEB-24 3SKD    1       REMARK SEQADV LINK                       
REVDAT   4   19-OCT-11 3SKD    1       JRNL                                     
REVDAT   3   10-AUG-11 3SKD    1       JRNL                                     
REVDAT   2   27-JUL-11 3SKD    1       REMARK                                   
REVDAT   1   20-JUL-11 3SKD    0                                                
JRNL        AUTH   S.MULEPATI,S.BAILEY                                          
JRNL        TITL   STRUCTURAL AND BIOCHEMICAL ANALYSIS OF NUCLEASE DOMAIN OF    
JRNL        TITL 2 CLUSTERED REGULARLY INTERSPACED SHORT PALINDROMIC REPEAT     
JRNL        TITL 3 (CRISPR)-ASSOCIATED PROTEIN 3 (CAS3).                        
JRNL        REF    J.BIOL.CHEM.                  V. 286 31896 2011              
JRNL        REFN                   ISSN 0021-9258                               
JRNL        PMID   21775431                                                     
JRNL        DOI    10.1074/JBC.M111.270017                                      
REMARK   2                                                                      
REMARK   2 RESOLUTION.    2.00 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : PHENIX 1.6_288                                       
REMARK   3   AUTHORS     : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN            
REMARK   3               : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,           
REMARK   3               : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,            
REMARK   3               : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,              
REMARK   3               : REETAL PAI,RANDY READ,JANE RICHARDSON,               
REMARK   3               : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,           
REMARK   3               : NICHOLAS SAUTER,JACOB SMITH,LAURENT                  
REMARK   3               : STORONI,TOM TERWILLIGER,PETER ZWART                  
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : ML                                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 35.36                          
REMARK   3   MIN(FOBS/SIGMA_FOBS)              : 0.340                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : 99.8                           
REMARK   3   NUMBER OF REFLECTIONS             : NULL                           
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.177                           
REMARK   3   R VALUE            (WORKING SET) : 0.176                           
REMARK   3   FREE R VALUE                     : 0.206                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 5.140                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 1638                            
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT (IN BINS).                           
REMARK   3   BIN  RESOLUTION RANGE  COMPL.    NWORK NFREE   RWORK  RFREE        
REMARK   3     1 35.3670 -  4.5759    1.00     2534   118  0.1905 0.2296        
REMARK   3     2  4.5759 -  3.6332    1.00     2541   117  0.1544 0.1674        
REMARK   3     3  3.6332 -  3.1742    1.00     2545   130  0.1557 0.1933        
REMARK   3     4  3.1742 -  2.8842    1.00     2484   134  0.1690 0.2201        
REMARK   3     5  2.8842 -  2.6775    1.00     2506   155  0.1621 0.1625        
REMARK   3     6  2.6775 -  2.5197    1.00     2500   161  0.1628 0.2296        
REMARK   3     7  2.5197 -  2.3935    1.00     2518   149  0.1615 0.1740        
REMARK   3     8  2.3935 -  2.2894    1.00     2515   132  0.1822 0.2167        
REMARK   3     9  2.2894 -  2.2013    1.00     2518   115  0.1903 0.2562        
REMARK   3    10  2.2013 -  2.1253    1.00     2526   143  0.2004 0.1781        
REMARK   3    11  2.1253 -  2.0589    1.00     2532   140  0.2016 0.2830        
REMARK   3    12  2.0589 -  2.0000    1.00     2502   144  0.2399 0.3076        
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED        : FLAT BULK SOLVENT MODEL                       
REMARK   3   SOLVENT RADIUS     : 1.11                                          
REMARK   3   SHRINKAGE RADIUS   : 0.90                                          
REMARK   3   K_SOL              : 0.44                                          
REMARK   3   B_SOL              : 43.48                                         
REMARK   3                                                                      
REMARK   3  ERROR ESTIMATES.                                                    
REMARK   3   COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED)     : 0.210            
REMARK   3   PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.660           
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 37.32                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : -3.49720                                             
REMARK   3    B22 (A**2) : -3.49720                                             
REMARK   3    B33 (A**2) : 6.99440                                              
REMARK   3    B12 (A**2) : 0.00000                                              
REMARK   3    B13 (A**2) : 0.00000                                              
REMARK   3    B23 (A**2) : 0.00000                                              
REMARK   3                                                                      
REMARK   3  TWINNING INFORMATION.                                               
REMARK   3   FRACTION: NULL                                                     
REMARK   3   OPERATOR: NULL                                                     
REMARK   3                                                                      
REMARK   3  DEVIATIONS FROM IDEAL VALUES.                                       
REMARK   3                 RMSD          COUNT                                  
REMARK   3   BOND      :  0.016           1887                                  
REMARK   3   ANGLE     :  1.483           2565                                  
REMARK   3   CHIRALITY :  0.085            267                                  
REMARK   3   PLANARITY :  0.008            336                                  
REMARK   3   DIHEDRAL  : 14.998            687                                  
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : 1                                          
REMARK   3   TLS GROUP : 1                                                      
REMARK   3    SELECTION: CHAIN A                                                
REMARK   3    ORIGIN FOR THE GROUP (A):  27.4349  40.1225  16.4270              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.1473 T22:   0.1310                                     
REMARK   3      T33:   0.1256 T12:  -0.0117                                     
REMARK   3      T13:  -0.0159 T23:   0.0207                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   1.0641 L22:   0.4100                                     
REMARK   3      L33:   0.5309 L12:   0.2371                                     
REMARK   3      L13:   0.0481 L23:   0.3504                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:   0.0158 S12:   0.0026 S13:  -0.0618                       
REMARK   3      S21:   0.0429 S22:  -0.0144 S23:   0.0010                       
REMARK   3      S31:   0.0520 S32:  -0.0121 S33:  -0.0000                       
REMARK   3                                                                      
REMARK   3  NCS DETAILS                                                         
REMARK   3   NUMBER OF NCS GROUPS : NULL                                        
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 3SKD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-JUL-11.                  
REMARK 100 THE DEPOSITION ID IS D_1000066309.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : NULL                               
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : 4.2                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : SSRL                               
REMARK 200  BEAMLINE                       : BL9-2                              
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.0                                
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : MARMOSAIC 325 MM CCD               
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : NULL                               
REMARK 200  DATA SCALING SOFTWARE          : SCALA 3.3.16                       
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 17751                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 1.998                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 35.362                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : NULL                               
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 99.9                               
REMARK 200  DATA REDUNDANCY                : 12.00                              
REMARK 200  R MERGE                    (I) : NULL                               
REMARK 200  R SYM                      (I) : 0.15400                            
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 9.5000                             
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 2.11                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 99.5                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 11.50                              
REMARK 200  R MERGE FOR SHELL          (I) : 0.70500                            
REMARK 200  R SYM FOR SHELL            (I) : 0.70500                            
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 1.000                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS            
REMARK 200 SOFTWARE USED: NULL                                                  
REMARK 200 STARTING MODEL: NULL                                                 
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 39.99                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.05                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 300, PH 4.2, VAPOR DIFFUSION,        
REMARK 280  SITTING DROP, TEMPERATURE 293K, VAPOR DIFFUSION, SITTING DROP       
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 2 2                         
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X,-Y,Z+1/2                                             
REMARK 290       3555   -Y,X,Z+3/4                                              
REMARK 290       4555   Y,-X,Z+1/4                                              
REMARK 290       5555   -X,Y,-Z                                                 
REMARK 290       6555   X,-Y,-Z+1/2                                             
REMARK 290       7555   Y,X,-Z+1/4                                              
REMARK 290       8555   -Y,-X,-Z+3/4                                            
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000      103.00550            
REMARK 290   SMTRY1   3  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY2   3  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY3   3  0.000000  0.000000  1.000000      154.50825            
REMARK 290   SMTRY1   4  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY2   4 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY3   4  0.000000  0.000000  1.000000       51.50275            
REMARK 290   SMTRY1   5 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   5  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   5  0.000000  0.000000 -1.000000        0.00000            
REMARK 290   SMTRY1   6  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   6  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   6  0.000000  0.000000 -1.000000      103.00550            
REMARK 290   SMTRY1   7  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY2   7  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY3   7  0.000000  0.000000 -1.000000       51.50275            
REMARK 290   SMTRY1   8  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY2   8 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY3   8  0.000000  0.000000 -1.000000      154.50825            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC                  
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 375                                                                      
REMARK 375 SPECIAL POSITION                                                     
REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS            
REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL          
REMARK 375 POSITIONS.                                                           
REMARK 375                                                                      
REMARK 375 ATOM RES CSSEQI                                                      
REMARK 375      HOH A 340  LIES ON A SPECIAL POSITION.                          
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     MET A    -4                                                      
REMARK 465     SER A    -3                                                      
REMARK 465     HIS A    -2                                                      
REMARK 465     HIS A    -1                                                      
REMARK 465     HIS A     0                                                      
REMARK 465     HIS A     1                                                      
REMARK 465     HIS A     2                                                      
REMARK 465     HIS A     3                                                      
REMARK 465     GLY A    81                                                      
REMARK 465     TRP A    82                                                      
REMARK 465     GLU A    83                                                      
REMARK 465     GLU A    84                                                      
REMARK 465     GLY A    85                                                      
REMARK 465     LYS A    86                                                      
REMARK 465     GLU A    87                                                      
REMARK 465     ARG A    88                                                      
REMARK 465     VAL A    89                                                      
REMARK 465     GLN A    90                                                      
REMARK 465     ARG A    91                                                      
REMARK 465     ALA A    92                                                      
REMARK 465     GLY A    93                                                      
REMARK 465     LEU A    94                                                      
REMARK 465     PRO A    95                                                      
REMARK 465     PHE A    96                                                      
REMARK 465     GLY A    97                                                      
REMARK 465     GLU A    98                                                      
REMARK 465     LEU A    99                                                      
REMARK 465     LEU A   100                                                      
REMARK 465     ASP A   101                                                      
REMARK 465     SER A   183                                                      
REMARK 465     GLN A   184                                                      
REMARK 465     GLY A   185                                                      
REMARK 465     ASN A   186                                                      
REMARK 465     GLY A   187                                                      
REMARK 465     GLU A   188                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500    ARG A 175   NE  -  CZ  -  NH2 ANGL. DEV. =  -3.9 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    ASN A  16      144.24   -173.07                                   
REMARK 500    PHE A 245      -70.97   -108.04                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 620                                                                      
REMARK 620 METAL COORDINATION                                                   
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):                             
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              NI A 261  NI                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 HIS A  24   NE2                                                    
REMARK 620 2 HIS A  69   NE2  95.6                                              
REMARK 620 3 ASP A  70   OD2  91.0  88.3                                        
REMARK 620 4 ASP A 205   OD1  93.2  82.5 170.2                                  
REMARK 620 5 HOH A 262   O    84.7 168.0 103.7  85.6                            
REMARK 620 6 HOH A 344   O   172.1  91.8  86.6  90.4  88.5                      
REMARK 620 N                    1     2     3     4     5                       
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NI A 261                  
DBREF  3SKD A    6   260  UNP    Q53VY2   Q53VY2_THET8     6    260             
SEQADV 3SKD MET A   -4  UNP  Q53VY2              EXPRESSION TAG                 
SEQADV 3SKD SER A   -3  UNP  Q53VY2              EXPRESSION TAG                 
SEQADV 3SKD HIS A   -2  UNP  Q53VY2              EXPRESSION TAG                 
SEQADV 3SKD HIS A   -1  UNP  Q53VY2              EXPRESSION TAG                 
SEQADV 3SKD HIS A    0  UNP  Q53VY2              EXPRESSION TAG                 
SEQADV 3SKD HIS A    1  UNP  Q53VY2              EXPRESSION TAG                 
SEQADV 3SKD HIS A    2  UNP  Q53VY2              EXPRESSION TAG                 
SEQADV 3SKD HIS A    3  UNP  Q53VY2              EXPRESSION TAG                 
SEQADV 3SKD SER A    4  UNP  Q53VY2              EXPRESSION TAG                 
SEQADV 3SKD MET A    5  UNP  Q53VY2              EXPRESSION TAG                 
SEQRES   1 A  265  MET SER HIS HIS HIS HIS HIS HIS SER MET ALA ALA LEU          
SEQRES   2 A  265  ALA LEU TRP ALA LYS SER GLY ASN PRO PHE HIS PRO LEU          
SEQRES   3 A  265  LEU ALA HIS MET LEU ASP THR ALA ALA VAL ALA LEU ALA          
SEQRES   4 A  265  VAL LEU ARG MET GLU PRO PRO ARG THR ARG ALA LEU TYR          
SEQRES   5 A  265  ALA GLU ASP TRP GLY LEU PRO GLU GLU GLY ALA LEU ALA          
SEQRES   6 A  265  TRP ALA ALA ALA LEU VAL GLY LEU HIS ASP LEU GLY LYS          
SEQRES   7 A  265  ALA SER PRO VAL PHE GLN ALA GLY TRP GLU GLU GLY LYS          
SEQRES   8 A  265  GLU ARG VAL GLN ARG ALA GLY LEU PRO PHE GLY GLU LEU          
SEQRES   9 A  265  LEU ASP TRP VAL ALA HIS GLY VAL PHE THR GLU LEU PHE          
SEQRES  10 A  265  LEU ARG ARG LEU LEU LYS GLU LYS GLY LEU PRO GLU ARG          
SEQRES  11 A  265  ALA ALA ASN ASP LEU ALA ALA ALA LEU GLY ALA HIS HIS          
SEQRES  12 A  265  GLY PHE PRO ALA ASN ALA GLU GLU LYS SER ARG ALA ARG          
SEQRES  13 A  265  ARG HIS LEU ARG THR GLU ASP PRO LEU TRP LYS GLU ALA          
SEQRES  14 A  265  ARG ARG TRP LEU LEU GLU GLU VAL PHE ARG ARG LEU GLY          
SEQRES  15 A  265  ALA PRO LEU PRO PRO SER GLN GLY ASN GLY GLU ALA ARG          
SEQRES  16 A  265  PRO GLU ALA VAL LEU ARG VAL MET ALA LEU ALA SER PHE          
SEQRES  17 A  265  ALA ASP TRP VAL ALA SER ASP PRO SER LEU PHE PRO TYR          
SEQRES  18 A  265  GLY ARG ASP PRO ARG ARG GLY ASP TYR LEU LYS GLU ALA          
SEQRES  19 A  265  LEU ARG LEU ALA GLN GLU ALA LEU ASN ARG LEU GLY TRP          
SEQRES  20 A  265  PRO ALA PHE ALA LYS ALA GLN ARG ARG GLU PHE GLY GLU          
SEQRES  21 A  265  LEU PHE PRO TYR ILE                                          
HET     NI  A 261       1                                                       
HETNAM      NI NICKEL (II) ION                                                  
FORMUL   2   NI    NI 2+                                                        
FORMUL   3  HOH   *108(H2 O)                                                    
HELIX    1   1 SER A    4  ALA A   12  1                                   9    
HELIX    2   2 PRO A   20  GLU A   39  1                                  20    
HELIX    3   3 PRO A   40  GLY A   52  1                                  13    
HELIX    4   4 PRO A   54  LEU A   68  1                                  15    
HELIX    5   5 HIS A   69  ALA A   74  5                                   6    
HELIX    6   6 SER A   75  GLN A   79  5                                   5    
HELIX    7   7 ALA A  104  LYS A  120  1                                  17    
HELIX    8   8 PRO A  123  LEU A  134  1                                  12    
HELIX    9   9 ASN A  143  GLU A  157  1                                  15    
HELIX   10  10 PRO A  159  GLY A  177  1                                  19    
HELIX   11  11 ARG A  190  SER A  209  1                                  20    
HELIX   12  12 ASP A  224  TRP A  242  1                                  19    
SHEET    1   A 2 ALA A 248  GLU A 252  0                                        
SHEET    2   A 2 GLU A 255  TYR A 259 -1  O  TYR A 259   N  ALA A 248           
LINK         NE2 HIS A  24                NI    NI A 261     1555   1555  2.31  
LINK         NE2 HIS A  69                NI    NI A 261     1555   1555  2.26  
LINK         OD2 ASP A  70                NI    NI A 261     1555   1555  2.00  
LINK         OD1 ASP A 205                NI    NI A 261     1555   1555  2.23  
LINK        NI    NI A 261                 O   HOH A 262     1555   1555  1.98  
LINK        NI    NI A 261                 O   HOH A 344     1555   1555  2.36  
SITE     1 AC1  6 HIS A  24  HIS A  69  ASP A  70  ASP A 205                    
SITE     2 AC1  6 HOH A 262  HOH A 344                                          
CRYST1   48.638   48.638  206.011  90.00  90.00  90.00 P 43 2 2      8          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.020560  0.000000  0.000000        0.00000                         
SCALE2      0.000000  0.020560  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.004854        0.00000                         
(ATOM LINES ARE NOT SHOWN.)
END                                                                             
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