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Database: PDB
Entry: 4J9S
LinkDB: 4J9S
Original site: 4J9S 
HEADER    TRANSFERASE/DNA                         16-FEB-13   4J9S              
TITLE     HUMAN DNA POLYMERASE ETA-DNA TRANSLOCATED BINARY COMPLEX: WITH TA BASE
TITLE    2 PAIR                                                                 
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: DNA POLYMERASE ETA;                                        
COMPND   3 CHAIN: A;                                                            
COMPND   4 FRAGMENT: CATALYTIC CORE DOMAIN, UNP RESIDUES 1-432;                 
COMPND   5 SYNONYM: RAD30 HOMOLOG A, XERODERMA PIGMENTOSUM VARIANT TYPE PROTEIN;
COMPND   6 EC: 2.7.7.7;                                                         
COMPND   7 ENGINEERED: YES;                                                     
COMPND   8 MOL_ID: 2;                                                           
COMPND   9 MOLECULE: DNA (5'-D(*T*AP*TP*TP*TP*AP*TP*GP*AP*CP*GP*T)-3');         
COMPND  10 CHAIN: T;                                                            
COMPND  11 ENGINEERED: YES;                                                     
COMPND  12 MOL_ID: 3;                                                           
COMPND  13 MOLECULE: DNA (5'-D(*TP*AP*CP*GP*TP*CP*AP*TP*A)-3');                 
COMPND  14 CHAIN: P;                                                            
COMPND  15 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 GENE: POLH, RAD30, RAD30A, XPV;                                      
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) PLYSS;                           
SOURCE   9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE  10 EXPRESSION_SYSTEM_PLASMID: PET28;                                    
SOURCE  11 MOL_ID: 2;                                                           
SOURCE  12 SYNTHETIC: YES;                                                      
SOURCE  13 MOL_ID: 3;                                                           
SOURCE  14 SYNTHETIC: YES                                                       
KEYWDS    IMMUNOGLOBULIN, A TO G TRANSITION, MISINCORPORATION, WOBBLE BASE      
KEYWDS   2 PAIR, DNA POLYMERASE, TRANSFERASE-DNA COMPLEX                        
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    Y.ZHAO,M.GREGORY,C.BIERTUMPFEL,Y.HUA,F.HANAOKA,W.YANG                 
REVDAT   3   20-SEP-23 4J9S    1       REMARK SEQADV                            
REVDAT   2   28-AUG-13 4J9S    1       JRNL                                     
REVDAT   1   01-MAY-13 4J9S    0                                                
JRNL        AUTH   Y.ZHAO,M.T.GREGORY,C.BIERTUMPFEL,Y.J.HUA,F.HANAOKA,W.YANG    
JRNL        TITL   MECHANISM OF SOMATIC HYPERMUTATION AT THE WA MOTIF BY HUMAN  
JRNL        TITL 2 DNA POLYMERASE ETA.                                          
JRNL        REF    PROC.NATL.ACAD.SCI.USA        V. 110  8146 2013              
JRNL        REFN                   ISSN 0027-8424                               
JRNL        PMID   23630267                                                     
JRNL        DOI    10.1073/PNAS.1303126110                                      
REMARK   2                                                                      
REMARK   2 RESOLUTION.    1.95 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : PHENIX 1.8.1_1168                                    
REMARK   3   AUTHORS     : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN            
REMARK   3               : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,           
REMARK   3               : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,            
REMARK   3               : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,              
REMARK   3               : REETAL PAI,RANDY READ,JANE RICHARDSON,               
REMARK   3               : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,           
REMARK   3               : NICHOLAS SAUTER,JACOB SMITH,LAURENT                  
REMARK   3               : STORONI,TOM TERWILLIGER,PETER ZWART                  
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : ML                                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 28.53                          
REMARK   3   MIN(FOBS/SIGMA_FOBS)              : 1.360                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : 98.1                           
REMARK   3   NUMBER OF REFLECTIONS             : 32264                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.186                           
REMARK   3   R VALUE            (WORKING SET) : 0.183                           
REMARK   3   FREE R VALUE                     : 0.222                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 7.650                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 2468                            
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT (IN BINS).                           
REMARK   3   BIN  RESOLUTION RANGE  COMPL.    NWORK NFREE   RWORK  RFREE        
REMARK   3     1 28.5299 -  5.1014    0.96     1650   139  0.1927 0.2148        
REMARK   3     2  5.1014 -  4.0528    0.96     1661   126  0.1619 0.1586        
REMARK   3     3  4.0528 -  3.5416    0.97     1628   139  0.1610 0.1920        
REMARK   3     4  3.5416 -  3.2183    0.97     1642   139  0.1663 0.2023        
REMARK   3     5  3.2183 -  2.9879    0.98     1661   125  0.1942 0.2479        
REMARK   3     6  2.9879 -  2.8119    0.98     1663   129  0.1924 0.2119        
REMARK   3     7  2.8119 -  2.6712    0.98     1616   142  0.1879 0.2694        
REMARK   3     8  2.6712 -  2.5550    0.98     1679   134  0.1863 0.2169        
REMARK   3     9  2.5550 -  2.4567    0.99     1635   157  0.1899 0.2430        
REMARK   3    10  2.4567 -  2.3719    0.98     1624   166  0.1882 0.2333        
REMARK   3    11  2.3719 -  2.2978    0.98     1670   125  0.1883 0.2865        
REMARK   3    12  2.2978 -  2.2321    0.99     1676   127  0.1913 0.2520        
REMARK   3    13  2.2321 -  2.1734    0.99     1666   131  0.1932 0.2604        
REMARK   3    14  2.1734 -  2.1204    0.99     1644   154  0.1952 0.2750        
REMARK   3    15  2.1204 -  2.0722    0.99     1680   124  0.2037 0.2496        
REMARK   3    16  2.0722 -  2.0281    0.99     1653   137  0.2046 0.2721        
REMARK   3    17  2.0281 -  1.9876    0.99     1675   142  0.2138 0.2857        
REMARK   3    18  1.9876 -  1.9501    0.99     1673   132  0.2321 0.2972        
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED        : FLAT BULK SOLVENT MODEL                       
REMARK   3   SOLVENT RADIUS     : 1.11                                          
REMARK   3   SHRINKAGE RADIUS   : 0.90                                          
REMARK   3   K_SOL              : NULL                                          
REMARK   3   B_SOL              : NULL                                          
REMARK   3                                                                      
REMARK   3  ERROR ESTIMATES.                                                    
REMARK   3   COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED)     : 0.220            
REMARK   3   PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.080           
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : 26.56                          
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 30.53                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : NULL                                                 
REMARK   3    B22 (A**2) : NULL                                                 
REMARK   3    B33 (A**2) : NULL                                                 
REMARK   3    B12 (A**2) : NULL                                                 
REMARK   3    B13 (A**2) : NULL                                                 
REMARK   3    B23 (A**2) : NULL                                                 
REMARK   3                                                                      
REMARK   3  TWINNING INFORMATION.                                               
REMARK   3   FRACTION: NULL                                                     
REMARK   3   OPERATOR: NULL                                                     
REMARK   3                                                                      
REMARK   3  DEVIATIONS FROM IDEAL VALUES.                                       
REMARK   3                 RMSD          COUNT                                  
REMARK   3   BOND      :  0.008           3925                                  
REMARK   3   ANGLE     :  1.173           5385                                  
REMARK   3   CHIRALITY :  0.073            608                                  
REMARK   3   PLANARITY :  0.005            632                                  
REMARK   3   DIHEDRAL  : 19.090           1508                                  
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : NULL                                       
REMARK   3                                                                      
REMARK   3  NCS DETAILS                                                         
REMARK   3   NUMBER OF NCS GROUPS : NULL                                        
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 4J9S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-FEB-13.                  
REMARK 100 THE DEPOSITION ID IS D_1000077775.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 05-JAN-10                          
REMARK 200  TEMPERATURE           (KELVIN) : 95                                 
REMARK 200  PH                             : 6.5                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : APS                                
REMARK 200  BEAMLINE                       : 22-BM                              
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.0                                
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : MARMOSAIC 225 MM CCD               
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : XDS                                
REMARK 200  DATA SCALING SOFTWARE          : XSCALE                             
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 32266                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 1.950                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 30.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : 2.000                              
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 98.1                               
REMARK 200  DATA REDUNDANCY                : 7.100                              
REMARK 200  R MERGE                    (I) : 0.06700                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 17.9500                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 2.00                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 99.4                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 7.03                               
REMARK 200  R MERGE FOR SHELL          (I) : 0.64300                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 3.510                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: MOLREP                                                
REMARK 200 STARTING MODEL: PDB ENTRY 3MR2                                       
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 40.83                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.08                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: PEG2K-MME, KCL, MES, PH 6.5, VAPOR       
REMARK 280  DIFFUSION, HANGING DROP, TEMPERATURE 298K                           
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61                             
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -Y,X-Y,Z+1/3                                            
REMARK 290       3555   -X+Y,-X,Z+2/3                                           
REMARK 290       4555   -X,-Y,Z+1/2                                             
REMARK 290       5555   Y,-X+Y,Z+5/6                                            
REMARK 290       6555   X-Y,X,Z+1/6                                             
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       27.03667            
REMARK 290   SMTRY1   3 -0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   3 -0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   3  0.000000  0.000000  1.000000       54.07333            
REMARK 290   SMTRY1   4 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   4  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   4  0.000000  0.000000  1.000000       40.55500            
REMARK 290   SMTRY1   5  0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   5 -0.866025  0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   5  0.000000  0.000000  1.000000       67.59167            
REMARK 290   SMTRY1   6  0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   6  0.866025  0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   6  0.000000  0.000000  1.000000       13.51833            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC                          
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC                   
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 4520 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 22030 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, T, P                               
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     GLY A    -2                                                      
REMARK 465     PRO A    -1                                                      
REMARK 465     PRO A   154                                                      
REMARK 465     THR A   155                                                      
REMARK 465     THR A   156                                                      
REMARK 465     ALA A   157                                                      
REMARK 465     GLU A   158                                                      
REMARK 465     GLU A   159                                                      
REMARK 465     GLY A   410                                                      
REMARK 465     ILE A   411                                                      
REMARK 465     GLN A   412                                                      
REMARK 465      DT T     1                                                      
REMARK 465      DT P     1                                                      
REMARK 470                                                                      
REMARK 470 MISSING ATOM                                                         
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;           
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;          
REMARK 470 I=INSERTION CODE):                                                   
REMARK 470   M RES CSSEQI  ATOMS                                                
REMARK 470      DA T   2    P    OP1  OP2                                       
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    CYS A  16       62.43     28.63                                   
REMARK 500    TYR A  39       82.96     66.86                                   
REMARK 500    ALA A 107     -177.86   -172.74                                   
REMARK 500    VAL A 161       -2.59     64.51                                   
REMARK 500    ASP A 181        2.48    104.66                                   
REMARK 500    SER A 217     -157.18   -159.46                                   
REMARK 500    SER A 257       -7.61     93.89                                   
REMARK 500    LYS A 428       63.13     61.30                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 501                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 502                 
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 3MR2   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4DL2   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4DL3   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4J9L   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4J9M   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4J9N   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4J9O   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4J9P   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4J9Q   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4J9R   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4J9K   RELATED DB: PDB                                   
DBREF  4J9S A    1   432  UNP    Q9Y253   POLH_HUMAN       1    432             
DBREF  4J9S T    1    12  PDB    4J9S     4J9S             1     12             
DBREF  4J9S P    1     9  PDB    4J9S     4J9S             1      9             
SEQADV 4J9S GLY A   -2  UNP  Q9Y253              EXPRESSION TAG                 
SEQADV 4J9S PRO A   -1  UNP  Q9Y253              EXPRESSION TAG                 
SEQADV 4J9S HIS A    0  UNP  Q9Y253              EXPRESSION TAG                 
SEQRES   1 A  435  GLY PRO HIS MET ALA THR GLY GLN ASP ARG VAL VAL ALA          
SEQRES   2 A  435  LEU VAL ASP MET ASP CYS PHE PHE VAL GLN VAL GLU GLN          
SEQRES   3 A  435  ARG GLN ASN PRO HIS LEU ARG ASN LYS PRO CYS ALA VAL          
SEQRES   4 A  435  VAL GLN TYR LYS SER TRP LYS GLY GLY GLY ILE ILE ALA          
SEQRES   5 A  435  VAL SER TYR GLU ALA ARG ALA PHE GLY VAL THR ARG SER          
SEQRES   6 A  435  MET TRP ALA ASP ASP ALA LYS LYS LEU CYS PRO ASP LEU          
SEQRES   7 A  435  LEU LEU ALA GLN VAL ARG GLU SER ARG GLY LYS ALA ASN          
SEQRES   8 A  435  LEU THR LYS TYR ARG GLU ALA SER VAL GLU VAL MET GLU          
SEQRES   9 A  435  ILE MET SER ARG PHE ALA VAL ILE GLU ARG ALA SER ILE          
SEQRES  10 A  435  ASP GLU ALA TYR VAL ASP LEU THR SER ALA VAL GLN GLU          
SEQRES  11 A  435  ARG LEU GLN LYS LEU GLN GLY GLN PRO ILE SER ALA ASP          
SEQRES  12 A  435  LEU LEU PRO SER THR TYR ILE GLU GLY LEU PRO GLN GLY          
SEQRES  13 A  435  PRO THR THR ALA GLU GLU THR VAL GLN LYS GLU GLY MET          
SEQRES  14 A  435  ARG LYS GLN GLY LEU PHE GLN TRP LEU ASP SER LEU GLN          
SEQRES  15 A  435  ILE ASP ASN LEU THR SER PRO ASP LEU GLN LEU THR VAL          
SEQRES  16 A  435  GLY ALA VAL ILE VAL GLU GLU MET ARG ALA ALA ILE GLU          
SEQRES  17 A  435  ARG GLU THR GLY PHE GLN CYS SER ALA GLY ILE SER HIS          
SEQRES  18 A  435  ASN LYS VAL LEU ALA LYS LEU ALA CYS GLY LEU ASN LYS          
SEQRES  19 A  435  PRO ASN ARG GLN THR LEU VAL SER HIS GLY SER VAL PRO          
SEQRES  20 A  435  GLN LEU PHE SER GLN MET PRO ILE ARG LYS ILE ARG SER          
SEQRES  21 A  435  LEU GLY GLY LYS LEU GLY ALA SER VAL ILE GLU ILE LEU          
SEQRES  22 A  435  GLY ILE GLU TYR MET GLY GLU LEU THR GLN PHE THR GLU          
SEQRES  23 A  435  SER GLN LEU GLN SER HIS PHE GLY GLU LYS ASN GLY SER          
SEQRES  24 A  435  TRP LEU TYR ALA MET CYS ARG GLY ILE GLU HIS ASP PRO          
SEQRES  25 A  435  VAL LYS PRO ARG GLN LEU PRO LYS THR ILE GLY CYS SER          
SEQRES  26 A  435  LYS ASN PHE PRO GLY LYS THR ALA LEU ALA THR ARG GLU          
SEQRES  27 A  435  GLN VAL GLN TRP TRP LEU LEU GLN LEU ALA GLN GLU LEU          
SEQRES  28 A  435  GLU GLU ARG LEU THR LYS ASP ARG ASN ASP ASN ASP ARG          
SEQRES  29 A  435  VAL ALA THR GLN LEU VAL VAL SER ILE ARG VAL GLN GLY          
SEQRES  30 A  435  ASP LYS ARG LEU SER SER LEU ARG ARG CYS CYS ALA LEU          
SEQRES  31 A  435  THR ARG TYR ASP ALA HIS LYS MET SER HIS ASP ALA PHE          
SEQRES  32 A  435  THR VAL ILE LYS ASN CYS ASN THR SER GLY ILE GLN THR          
SEQRES  33 A  435  GLU TRP SER PRO PRO LEU THR MET LEU PHE LEU CYS ALA          
SEQRES  34 A  435  THR LYS PHE SER ALA SER                                      
SEQRES   1 T   12   DT  DA  DT  DT  DT  DA  DT  DG  DA  DC  DG  DT              
SEQRES   1 P    9   DT  DA  DC  DG  DT  DC  DA  DT  DA                          
HET    GOL  A 501       6                                                       
HET    GOL  A 502       6                                                       
HETNAM     GOL GLYCEROL                                                         
HETSYN     GOL GLYCERIN; PROPANE-1,2,3-TRIOL                                    
FORMUL   4  GOL    2(C3 H8 O3)                                                  
FORMUL   6  HOH   *256(H2 O)                                                    
HELIX    1   1 CYS A   16  ASN A   26  1                                  11    
HELIX    2   2 PRO A   27  ARG A   30  5                                   4    
HELIX    3   3 SER A   41  GLY A   45  5                                   5    
HELIX    4   4 SER A   51  ALA A   56  1                                   6    
HELIX    5   5 TRP A   64  CYS A   72  1                                   9    
HELIX    6   6 LEU A   89  ARG A  105  1                                  17    
HELIX    7   7 LEU A  121  LEU A  132  1                                  12    
HELIX    8   8 SER A  138  LEU A  142  5                                   5    
HELIX    9   9 GLN A  162  ASP A  181  1                                  20    
HELIX   10  10 THR A  184  GLY A  209  1                                  26    
HELIX   11  11 ASN A  219  GLY A  228  1                                  10    
HELIX   12  12 SER A  242  GLN A  249  1                                   8    
HELIX   13  13 MET A  250  ILE A  255  5                                   6    
HELIX   14  14 GLY A  260  GLY A  271  1                                  12    
HELIX   15  15 TYR A  274  PHE A  281  5                                   8    
HELIX   16  16 THR A  282  GLY A  291  1                                  10    
HELIX   17  17 GLY A  291  CYS A  302  1                                  12    
HELIX   18  18 PRO A  326  ALA A  330  5                                   5    
HELIX   19  19 ARG A  334  ASP A  360  1                                  27    
HELIX   20  20 ASP A  391  LYS A  404  1                                  14    
HELIX   21  21 ASN A  405  ASN A  407  5                                   3    
SHEET    1   A 6 VAL A 108  ARG A 111  0                                        
SHEET    2   A 6 GLU A 116  ASP A 120 -1  O  TYR A 118   N  GLU A 110           
SHEET    3   A 6 VAL A   9  MET A  14 -1  N  ALA A  10   O  VAL A 119           
SHEET    4   A 6 CYS A 212  SER A 217 -1  O  SER A 217   N  VAL A   9           
SHEET    5   A 6 GLN A 235  LEU A 237  1  O  THR A 236   N  ILE A 216           
SHEET    6   A 6 THR A 145  ILE A 147  1  N  TYR A 146   O  LEU A 237           
SHEET    1   B 3 GLY A  46  VAL A  50  0                                        
SHEET    2   B 3 CYS A  34  GLN A  38 -1  N  VAL A  36   O  ILE A  48           
SHEET    3   B 3 LEU A  76  GLN A  79  1  O  ALA A  78   N  VAL A  37           
SHEET    1   C 2 GLU A  82  SER A  83  0                                        
SHEET    2   C 2 LYS A  86  ALA A  87 -1  O  LYS A  86   N  SER A  83           
SHEET    1   D 3 ILE A 319  ASN A 324  0                                        
SHEET    2   D 3 GLU A 414  ALA A 431 -1  O  ALA A 426   N  ILE A 319           
SHEET    3   D 3 LEU A 331  THR A 333 -1  N  ALA A 332   O  TRP A 415           
SHEET    1   E 4 ILE A 319  ASN A 324  0                                        
SHEET    2   E 4 GLU A 414  ALA A 431 -1  O  ALA A 426   N  ILE A 319           
SHEET    3   E 4 ARG A 361  VAL A 372 -1  N  VAL A 367   O  CYS A 425           
SHEET    4   E 4 LEU A 381  ALA A 386 -1  O  ARG A 383   N  VAL A 368           
CISPEP   1 LEU A  150    PRO A  151          0        -1.65                     
CISPEP   2 LYS A  231    PRO A  232          0        -3.38                     
CISPEP   3 SER A  416    PRO A  417          0        -4.61                     
SITE     1 AC1 10 ARG A  24  PRO A 244  PHE A 247  SER A 248                    
SITE     2 AC1 10 GLY A 276  GLU A 277  HOH A 603  HOH A 623                    
SITE     3 AC1 10 HOH A 633  HOH A 643                                          
SITE     1 AC2  8 ASN A  26  PRO A  27  HIS A  28  GLY A 271                    
SITE     2 AC2  8 GLU A 273  TYR A 274  GLU A 277  HOH A 689                    
CRYST1   98.820   98.820   81.110  90.00  90.00 120.00 P 61          6          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.010119  0.005842  0.000000        0.00000                         
SCALE2      0.000000  0.011685  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.012329        0.00000                         
(ATOM LINES ARE NOT SHOWN.)
END                                                                             
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