GenomeNet

Database: PDB
Entry: 5JYI
LinkDB: 5JYI
Original site: 5JYI 
HEADER    HYDROLASE                               14-MAY-16   5JYI              
TITLE     TRYPSIN BOUND WITH SUCCINIC ACID AT 1.9A                              
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: CATIONIC TRYPSIN;                                          
COMPND   3 CHAIN: A;                                                            
COMPND   4 SYNONYM: BETA-TRYPSIN;                                               
COMPND   5 EC: 3.4.21.4                                                         
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: BOS TAURUS;                                     
SOURCE   3 ORGANISM_COMMON: BOVINE;                                             
SOURCE   4 ORGANISM_TAXID: 9913                                                 
KEYWDS    SUCCINIC ACID, HYDROLASE                                              
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    R.MANOHAR,N.H.V.KUTUMBARAO,L.KARTHIK,P.MALATHY,D.VELMURUGAN,          
AUTHOR   2 K.GUNASEKARAN                                                        
REVDAT   2   08-NOV-23 5JYI    1       REMARK LINK                              
REVDAT   1   06-JUL-16 5JYI    0                                                
JRNL        AUTH   R.MANOHAR,N.H.V.KUTUMBARAO,L.KARTHIK,P.MALATHY,D.VELMURUGAN, 
JRNL        AUTH 2 K.GUNASEKARAN                                                
JRNL        TITL   TRYPSIN BOUND WITH SUCCINIC ACID AT 1.9A                     
JRNL        REF    TO BE PUBLISHED                                              
JRNL        REFN                                                                
REMARK   2                                                                      
REMARK   2 RESOLUTION.    1.91 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : PHENIX 1.8.4_1496                                    
REMARK   3   AUTHORS     : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN            
REMARK   3               : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,           
REMARK   3               : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,            
REMARK   3               : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,              
REMARK   3               : REETAL PAI,RANDY READ,JANE RICHARDSON,               
REMARK   3               : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,           
REMARK   3               : NICHOLAS SAUTER,JACOB SMITH,LAURENT                  
REMARK   3               : STORONI,TOM TERWILLIGER,PETER ZWART                  
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : ML                                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 1.91                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 38.41                          
REMARK   3   MIN(FOBS/SIGMA_FOBS)              : 1.360                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : 99.6                           
REMARK   3   NUMBER OF REFLECTIONS             : 15134                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.158                           
REMARK   3   R VALUE            (WORKING SET) : 0.153                           
REMARK   3   FREE R VALUE                     : 0.201                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 10.000                          
REMARK   3   FREE R VALUE TEST SET COUNT      : 1514                            
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT (IN BINS).                           
REMARK   3   BIN  RESOLUTION RANGE  COMPL.    NWORK NFREE   RWORK  RFREE        
REMARK   3     1 38.4127 -  4.2550    1.00     1339   149  0.1671 0.1810        
REMARK   3     2  4.2550 -  3.3780    1.00     1268   141  0.1380 0.1807        
REMARK   3     3  3.3780 -  2.9511    1.00     1257   140  0.1557 0.2127        
REMARK   3     4  2.9511 -  2.6814    1.00     1236   138  0.1720 0.2444        
REMARK   3     5  2.6814 -  2.4892    1.00     1242   138  0.1635 0.2026        
REMARK   3     6  2.4892 -  2.3425    1.00     1234   136  0.1553 0.2104        
REMARK   3     7  2.3425 -  2.2252    1.00     1206   134  0.1524 0.1998        
REMARK   3     8  2.2252 -  2.1283    1.00     1233   137  0.1434 0.1970        
REMARK   3     9  2.1283 -  2.0464    1.00     1219   136  0.1410 0.1894        
REMARK   3    10  2.0464 -  1.9758    1.00     1225   137  0.1383 0.2233        
REMARK   3    11  1.9758 -  1.9140    0.96     1161   128  0.1384 0.2070        
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED        : FLAT BULK SOLVENT MODEL                       
REMARK   3   SOLVENT RADIUS     : 1.11                                          
REMARK   3   SHRINKAGE RADIUS   : 0.90                                          
REMARK   3   K_SOL              : NULL                                          
REMARK   3   B_SOL              : NULL                                          
REMARK   3                                                                      
REMARK   3  ERROR ESTIMATES.                                                    
REMARK   3   COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED)     : 0.150            
REMARK   3   PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.620           
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : NULL                           
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : NULL                                                 
REMARK   3    B22 (A**2) : NULL                                                 
REMARK   3    B33 (A**2) : NULL                                                 
REMARK   3    B12 (A**2) : NULL                                                 
REMARK   3    B13 (A**2) : NULL                                                 
REMARK   3    B23 (A**2) : NULL                                                 
REMARK   3                                                                      
REMARK   3  TWINNING INFORMATION.                                               
REMARK   3   FRACTION: NULL                                                     
REMARK   3   OPERATOR: NULL                                                     
REMARK   3                                                                      
REMARK   3  DEVIATIONS FROM IDEAL VALUES.                                       
REMARK   3                 RMSD          COUNT                                  
REMARK   3   BOND      :  0.008           1634                                  
REMARK   3   ANGLE     :  1.164           2208                                  
REMARK   3   CHIRALITY :  0.052            252                                  
REMARK   3   PLANARITY :  0.005            285                                  
REMARK   3   DIHEDRAL  : 11.977            568                                  
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : NULL                                       
REMARK   3                                                                      
REMARK   3  NCS DETAILS                                                         
REMARK   3   NUMBER OF NCS GROUPS : NULL                                        
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 5JYI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 17-MAY-16.                  
REMARK 100 THE DEPOSITION ID IS D_1000221423.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 14-AUG-14                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : 5.8-6.5                            
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : N                                  
REMARK 200  RADIATION SOURCE               : ROTATING ANODE                     
REMARK 200  BEAMLINE                       : NULL                               
REMARK 200  X-RAY GENERATOR MODEL          : BRUKER AXS MICROSTAR               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.54                               
REMARK 200  MONOCHROMATOR                  : COPPER K-ALPHA                     
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : IMAGE PLATE                        
REMARK 200  DETECTOR MANUFACTURER          : MARRESEARCH                        
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : IMOSFLM                            
REMARK 200  DATA SCALING SOFTWARE          : AIMLESS                            
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 15134                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 1.900                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 39.660                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : NULL                               
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 99.3                               
REMARK 200  DATA REDUNDANCY                : 2.000                              
REMARK 200  R MERGE                    (I) : NULL                               
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 19.0000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : NULL                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : NULL                               
REMARK 200  DATA REDUNDANCY IN SHELL       : NULL                               
REMARK 200  R MERGE FOR SHELL          (I) : NULL                               
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : NULL                               
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: PHENIX                                                
REMARK 200 STARTING MODEL: 4I8H                                                 
REMARK 200                                                                      
REMARK 200 REMARK: RECTANGULAR SHAPE                                            
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 32.60                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.00                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SUCCINIC ACID,0.1M SODIUM ACETATE   
REMARK 280  PH 5.8,15%(W/V) PEG3350, PH 5.5, EVAPORATION, TEMPERATURE 298.15K   
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21                       
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X+1/2,-Y,Z+1/2                                         
REMARK 290       3555   -X,Y+1/2,-Z+1/2                                         
REMARK 290       4555   X+1/2,-Y+1/2,-Z                                         
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000       23.16000            
REMARK 290   SMTRY2   2  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       38.40500            
REMARK 290   SMTRY1   3 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   3  0.000000  1.000000  0.000000       26.59000            
REMARK 290   SMTRY3   3  0.000000  0.000000 -1.000000       38.40500            
REMARK 290   SMTRY1   4  1.000000  0.000000  0.000000       23.16000            
REMARK 290   SMTRY2   4  0.000000 -1.000000  0.000000       26.59000            
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC                  
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 130 ANGSTROM**2                           
REMARK 350 SURFACE AREA OF THE COMPLEX: 8960 ANGSTROM**2                        
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     MET A    -7                                                      
REMARK 465     LYS A    -6                                                      
REMARK 465     THR A    -5                                                      
REMARK 465     PHE A    -4                                                      
REMARK 465     ILE A    -3                                                      
REMARK 465     PHE A    -2                                                      
REMARK 465     LEU A    -1                                                      
REMARK 465     ALA A     0                                                      
REMARK 465     LEU A     1                                                      
REMARK 465     LEU A     2                                                      
REMARK 465     GLY A     3                                                      
REMARK 465     ALA A     4                                                      
REMARK 465     ALA A     5                                                      
REMARK 465     VAL A     6                                                      
REMARK 465     ALA A     7                                                      
REMARK 465     PHE A     8                                                      
REMARK 465     PRO A     9                                                      
REMARK 465     VAL A    10                                                      
REMARK 465     ASP A    11                                                      
REMARK 465     ASP A    12                                                      
REMARK 465     ASP A    13                                                      
REMARK 465     ASP A    14                                                      
REMARK 465     LYS A    15                                                      
REMARK 465     SER A   146                                                      
REMARK 465     SER A   147                                                      
REMARK 465     GLY A   148                                                      
REMARK 470                                                                      
REMARK 470 MISSING ATOM                                                         
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;           
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;          
REMARK 470 I=INSERTION CODE):                                                   
REMARK 470   M RES CSSEQI  ATOMS                                                
REMARK 470     TYR A  39    CG   CD1  CD2  CE1  CE2  CZ   OH                    
REMARK 470     SER A  96    OG                                                  
REMARK 470     LYS A 109    CG   CD   CE   NZ                                   
REMARK 470     LYS A 145    CG   CD   CE   NZ                                   
REMARK 470     THR A 149    OG1  CG2                                            
REMARK 470     SER A 178    OG                                                  
REMARK 470     PHE A 181    CG   CD1  CD2  CE1  CE2  CZ                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT                     
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   O    HOH A   512     O    HOH A   533              1.76            
REMARK 500   OE1  GLN A   240     O    HOH A   401              1.81            
REMARK 500   O    HOH A   612     O    HOH A   637              1.82            
REMARK 500   O    SER A   150     O    HOH A   402              1.92            
REMARK 500   O    HOH A   621     O    HOH A   668              1.95            
REMARK 500   O    HOH A   509     O    HOH A   539              2.02            
REMARK 500   O    HOH A   590     O    HOH A   647              2.02            
REMARK 500   ND2  ASN A    74     OD1  ASP A   153              2.09            
REMARK 500   O    HOH A   549     O    HOH A   659              2.11            
REMARK 500   O    HOH A   554     O    HOH A   644              2.13            
REMARK 500   O    HOH A   430     O    HOH A   699              2.13            
REMARK 500   NZ   LYS A   156     O    HOH A   403              2.14            
REMARK 500   O    HOH A   411     O    HOH A   644              2.18            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS                                             
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC             
REMARK 500 SYMMETRY ARE IN CLOSE CONTACT.  AN ATOM LOCATED WITHIN 0.15          
REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A           
REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375             
REMARK 500 INSTEAD OF REMARK 500.  ATOMS WITH NON-BLANK ALTERNATE               
REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS.            
REMARK 500                                                                      
REMARK 500 DISTANCE CUTOFF:                                                     
REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS              
REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS                  
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI  SSYMOP   DISTANCE          
REMARK 500   O    HOH A   419     O    HOH A   636     3444     2.05            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    ASP A  71      -64.67   -128.50                                   
REMARK 500    ASN A 115     -154.37   -148.10                                   
REMARK 500    SER A 195      135.87    -36.70                                   
REMARK 500    SER A 214      -65.60   -121.24                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 525                                                                      
REMARK 525 SOLVENT                                                              
REMARK 525                                                                      
REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT                    
REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST                  
REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT                 
REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE                       
REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER;                             
REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE                  
REMARK 525 NUMBER; I=INSERTION CODE):                                           
REMARK 525                                                                      
REMARK 525  M RES CSSEQI                                                        
REMARK 525    HOH A 736        DISTANCE =  5.87 ANGSTROMS                       
REMARK 525    HOH A 737        DISTANCE =  6.04 ANGSTROMS                       
REMARK 525    HOH A 738        DISTANCE =  6.10 ANGSTROMS                       
REMARK 525    HOH A 739        DISTANCE =  6.11 ANGSTROMS                       
REMARK 525    HOH A 740        DISTANCE =  6.21 ANGSTROMS                       
REMARK 525    HOH A 741        DISTANCE =  6.24 ANGSTROMS                       
REMARK 525    HOH A 742        DISTANCE =  6.84 ANGSTROMS                       
REMARK 525    HOH A 743        DISTANCE =  7.30 ANGSTROMS                       
REMARK 620                                                                      
REMARK 620 METAL COORDINATION                                                   
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):                             
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              CA A 301  CA                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 GLU A  70   OE1                                                    
REMARK 620 2 ASN A  72   O    86.8                                              
REMARK 620 3 VAL A  75   O   152.6  83.4                                        
REMARK 620 4 GLU A  80   OE2 102.1 169.7  86.4                                  
REMARK 620 5 HOH A 427   O    74.6 100.5  82.1  77.4                            
REMARK 620 6 HOH A 625   O    91.8  91.3 113.8  93.5 161.4                      
REMARK 620 N                    1     2     3     4     5                       
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              NA A 303  NA                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 GLU A  70   O                                                      
REMARK 620 2 ASP A  71   OD1 112.3                                              
REMARK 620 3 HOH A 499   O    98.9 145.6                                        
REMARK 620 N                    1     2                                         
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 301                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue SIN A 302                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC3                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 303                  
DBREF  5JYI A   -7   245  UNP    P00760   TRY1_BOVIN       1    246             
SEQRES   1 A  246  MET LYS THR PHE ILE PHE LEU ALA LEU LEU GLY ALA ALA          
SEQRES   2 A  246  VAL ALA PHE PRO VAL ASP ASP ASP ASP LYS ILE VAL GLY          
SEQRES   3 A  246  GLY TYR THR CYS GLY ALA ASN THR VAL PRO TYR GLN VAL          
SEQRES   4 A  246  SER LEU ASN SER GLY TYR HIS PHE CYS GLY GLY SER LEU          
SEQRES   5 A  246  ILE ASN SER GLN TRP VAL VAL SER ALA ALA HIS CYS TYR          
SEQRES   6 A  246  LYS SER GLY ILE GLN VAL ARG LEU GLY GLU ASP ASN ILE          
SEQRES   7 A  246  ASN VAL VAL GLU GLY ASN GLU GLN PHE ILE SER ALA SER          
SEQRES   8 A  246  LYS SER ILE VAL HIS PRO SER TYR ASN SER ASN THR LEU          
SEQRES   9 A  246  ASN ASN ASP ILE MET LEU ILE LYS LEU LYS SER ALA ALA          
SEQRES  10 A  246  SER LEU ASN SER ARG VAL ALA SER ILE SER LEU PRO THR          
SEQRES  11 A  246  SER CYS ALA SER ALA GLY THR GLN CYS LEU ILE SER GLY          
SEQRES  12 A  246  TRP GLY ASN THR LYS SER SER GLY THR SER TYR PRO ASP          
SEQRES  13 A  246  VAL LEU LYS CYS LEU LYS ALA PRO ILE LEU SER ASP SER          
SEQRES  14 A  246  SER CYS LYS SER ALA TYR PRO GLY GLN ILE THR SER ASN          
SEQRES  15 A  246  MET PHE CYS ALA GLY TYR LEU GLU GLY GLY LYS ASP SER          
SEQRES  16 A  246  CYS GLN GLY ASP SER GLY GLY PRO VAL VAL CYS SER GLY          
SEQRES  17 A  246  LYS LEU GLN GLY ILE VAL SER TRP GLY SER GLY CYS ALA          
SEQRES  18 A  246  GLN LYS ASN LYS PRO GLY VAL TYR THR LYS VAL CYS ASN          
SEQRES  19 A  246  TYR VAL SER TRP ILE LYS GLN THR ILE ALA SER ASN              
HET     CA  A 301       1                                                       
HET    SIN  A 302       8                                                       
HET     NA  A 303       1                                                       
HETNAM      CA CALCIUM ION                                                      
HETNAM     SIN SUCCINIC ACID                                                    
HETNAM      NA SODIUM ION                                                       
FORMUL   2   CA    CA 2+                                                        
FORMUL   3  SIN    C4 H6 O4                                                     
FORMUL   4   NA    NA 1+                                                        
FORMUL   5  HOH   *343(H2 O)                                                    
HELIX    1 AA1 ALA A   55  TYR A   59  5                                   5    
HELIX    2 AA2 SER A  164  TYR A  172  1                                   9    
HELIX    3 AA3 TYR A  234  ASN A  245  1                                  12    
SHEET    1 AA1 7 TYR A  20  THR A  21  0                                        
SHEET    2 AA1 7 LYS A 156  PRO A 161 -1  O  CYS A 157   N  TYR A  20           
SHEET    3 AA1 7 GLN A 135  GLY A 140 -1  N  ILE A 138   O  LEU A 158           
SHEET    4 AA1 7 PRO A 198  CYS A 201 -1  O  VAL A 200   N  LEU A 137           
SHEET    5 AA1 7 LYS A 204  TRP A 215 -1  O  LYS A 204   N  CYS A 201           
SHEET    6 AA1 7 GLY A 226  LYS A 230 -1  O  VAL A 227   N  TRP A 215           
SHEET    7 AA1 7 MET A 180  ALA A 183 -1  N  PHE A 181   O  TYR A 228           
SHEET    1 AA2 7 GLN A  30  ASN A  34  0                                        
SHEET    2 AA2 7 HIS A  40  ASN A  48 -1  O  CYS A  42   N  LEU A  33           
SHEET    3 AA2 7 TRP A  51  SER A  54 -1  O  VAL A  53   N  SER A  45           
SHEET    4 AA2 7 MET A 104  LEU A 108 -1  O  ILE A 106   N  VAL A  52           
SHEET    5 AA2 7 GLN A  81  VAL A  90 -1  N  SER A  86   O  LYS A 107           
SHEET    6 AA2 7 GLN A  64  LEU A  67 -1  N  LEU A  67   O  GLN A  81           
SHEET    7 AA2 7 GLN A  30  ASN A  34 -1  N  ASN A  34   O  GLN A  64           
SSBOND   1 CYS A   22    CYS A  157                          1555   1555  2.03  
SSBOND   2 CYS A   42    CYS A   58                          1555   1555  2.03  
SSBOND   3 CYS A  128    CYS A  232                          1555   1555  2.04  
SSBOND   4 CYS A  136    CYS A  201                          1555   1555  2.02  
SSBOND   5 CYS A  168    CYS A  182                          1555   1555  2.04  
SSBOND   6 CYS A  191    CYS A  220                          1555   1555  2.04  
LINK         OE1 GLU A  70                CA    CA A 301     1555   1555  2.33  
LINK         O   GLU A  70                NA    NA A 303     1555   1555  2.77  
LINK         OD1 ASP A  71                NA    NA A 303     1555   1555  2.82  
LINK         O   ASN A  72                CA    CA A 301     1555   1555  2.33  
LINK         O   VAL A  75                CA    CA A 301     1555   1555  2.35  
LINK         OE2 GLU A  80                CA    CA A 301     1555   1555  2.27  
LINK        CA    CA A 301                 O   HOH A 427     1555   1555  2.68  
LINK        CA    CA A 301                 O   HOH A 625     1555   1555  2.44  
LINK        NA    NA A 303                 O   HOH A 499     1555   1555  2.67  
SITE     1 AC1  6 GLU A  70  ASN A  72  VAL A  75  GLU A  80                    
SITE     2 AC1  6 HOH A 427  HOH A 625                                          
SITE     1 AC2 12 PHE A  41  HIS A  57  CYS A 128  TYR A 151                    
SITE     2 AC2 12 GLN A 192  GLY A 193  SER A 195  LYS A 230                    
SITE     3 AC2 12 HOH A 463  HOH A 464  HOH A 502  HOH A 573                    
SITE     1 AC3  4 ASN A  25  GLU A  70  ASP A  71  HOH A 499                    
CRYST1   46.320   53.180   76.810  90.00  90.00  90.00 P 21 21 21    4          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.021589  0.000000  0.000000        0.00000                         
SCALE2      0.000000  0.018804  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.013019        0.00000                         
(ATOM LINES ARE NOT SHOWN.)
END                                                                             
DBGET integrated database retrieval system