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Database: PDB
Entry: 6HD5
LinkDB: 6HD5
Original site: 6HD5 
HEADER    TRANSLATION                             17-AUG-18   6HD5              
TITLE     CRYO-EM STRUCTURE OF THE RIBOSOME-NATA COMPLEX                        
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: N-TERMINAL ACETYLTRANSFERASE A COMPLEX SUBUNIT NAT1;       
COMPND   3 CHAIN: t;                                                            
COMPND   4 SYNONYM: NATA COMPLEX SUBUNIT NAT1,AMINO-TERMINAL,ALPHA-AMINO,       
COMPND   5 ACETYLTRANSFERASE 1;                                                 
COMPND   6 OTHER_DETAILS: RIBOSOME BINDING SUBUNIT;                             
COMPND   7 MOL_ID: 2;                                                           
COMPND   8 MOLECULE: N-TERMINAL ACETYLTRANSFERASE A COMPLEX CATALYTIC SUBUNIT   
COMPND   9 ARD1;                                                                
COMPND  10 CHAIN: u;                                                            
COMPND  11 SYNONYM: NATA COMPLEX SUBUNIT ARD1,ARREST-DEFECTIVE PROTEIN 1;       
COMPND  12 EC: 2.3.1.255;                                                       
COMPND  13 OTHER_DETAILS: CATALYTIC SUBUNIT;                                    
COMPND  14 MOL_ID: 3;                                                           
COMPND  15 MOLECULE: N-ALPHA-ACETYLTRANSFERASE NAT5;                            
COMPND  16 CHAIN: v;                                                            
COMPND  17 SYNONYM: NATA COMPLEX SUBUNIT NAT5;                                  
COMPND  18 EC: 2.3.1.258;                                                       
COMPND  19 OTHER_DETAILS: RIBOSOME BINDING SUBUNIT                              
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 /  
SOURCE   3 S288C);                                                              
SOURCE   4 ORGANISM_TAXID: 559292;                                              
SOURCE   5 MOL_ID: 2;                                                           
SOURCE   6 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 /  
SOURCE   7 S288C);                                                              
SOURCE   8 ORGANISM_TAXID: 559292;                                              
SOURCE   9 MOL_ID: 3;                                                           
SOURCE  10 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 /  
SOURCE  11 S288C);                                                              
SOURCE  12 ORGANISM_TAXID: 559292                                               
KEYWDS    N-TERMINAL ACETYLATION, PROTEIN MODIFICATION, RIBOSOME, EXPANSION     
KEYWDS   2 SEGMENTS, TRANSLATION                                                
EXPDTA    ELECTRON MICROSCOPY                                                   
AUTHOR    A.G.KNORR,T.BECKER,R.BECKMANN                                         
REVDAT   3   16-JAN-19 6HD5    1       JRNL                                     
REVDAT   2   26-DEC-18 6HD5    1       JRNL                                     
REVDAT   1   19-DEC-18 6HD5    0                                                
JRNL        AUTH   A.G.KNORR,C.SCHMIDT,P.TESINA,O.BERNINGHAUSEN,T.BECKER,       
JRNL        AUTH 2 B.BEATRIX,R.BECKMANN                                         
JRNL        TITL   RIBOSOME-NATA ARCHITECTURE REVEALS THAT RRNA EXPANSION       
JRNL        TITL 2 SEGMENTS COORDINATE N-TERMINAL ACETYLATION.                  
JRNL        REF    NAT. STRUCT. MOL. BIOL.       V.  26    35 2019              
JRNL        REFN                   ESSN 1545-9985                               
JRNL        PMID   30559462                                                     
JRNL        DOI    10.1038/S41594-018-0165-Y                                    
REMARK   2                                                                      
REMARK   2 RESOLUTION.    4.80 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   SOFTWARE PACKAGES      : GAUTOMATCH, GCTF, RELION, RELION,         
REMARK   3                            RELION                                    
REMARK   3   RECONSTRUCTION SCHEMA  : NULL                                      
REMARK   3                                                                      
REMARK   3 EM MAP-MODEL FITTING AND REFINEMENT                                  
REMARK   3   PDB ENTRY                    : NULL                                
REMARK   3   REFINEMENT SPACE             : NULL                                
REMARK   3   REFINEMENT PROTOCOL          : RIGID BODY FIT                      
REMARK   3   REFINEMENT TARGET            : NULL                                
REMARK   3   OVERALL ANISOTROPIC B VALUE  : NULL                                
REMARK   3                                                                      
REMARK   3 FITTING PROCEDURE : NULL                                             
REMARK   3                                                                      
REMARK   3 EM IMAGE RECONSTRUCTION STATISTICS                                   
REMARK   3   NOMINAL PIXEL SIZE (ANGSTROMS)    : NULL                           
REMARK   3   ACTUAL PIXEL SIZE  (ANGSTROMS)    : NULL                           
REMARK   3   EFFECTIVE RESOLUTION (ANGSTROMS)  : 4.800                          
REMARK   3   NUMBER OF PARTICLES               : 262507                         
REMARK   3   CTF CORRECTION METHOD             : PHASE FLIPPING AND AMPLITUDE   
REMARK   3                                       CORRECTION                     
REMARK   3                                                                      
REMARK   3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL                    
REMARK   3                                                                      
REMARK   3 OTHER DETAILS: NULL                                                  
REMARK   4                                                                      
REMARK   4 6HD5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-AUG-18.                  
REMARK 100 THE DEPOSITION ID IS D_1200011427.                                   
REMARK 245                                                                      
REMARK 245 EXPERIMENTAL DETAILS                                                 
REMARK 245   RECONSTRUCTION METHOD          : SINGLE PARTICLE                   
REMARK 245   SPECIMEN TYPE                  : NULL                              
REMARK 245                                                                      
REMARK 245 ELECTRON MICROSCOPE SAMPLE                                           
REMARK 245   SAMPLE TYPE                    : PARTICLE                          
REMARK 245   PARTICLE TYPE                  : POINT                             
REMARK 245   NAME OF SAMPLE                 : RIBOSOME-NATA COMPLEX             
REMARK 245   SAMPLE CONCENTRATION (MG ML-1) : NULL                              
REMARK 245   SAMPLE SUPPORT DETAILS         : NULL                              
REMARK 245   SAMPLE VITRIFICATION DETAILS   : NULL                              
REMARK 245   SAMPLE BUFFER                  : NULL                              
REMARK 245   PH                             : 7.50                              
REMARK 245   SAMPLE DETAILS                 : MAP WAS REFINED ON NATA.          
REMARK 245  COORDINATES ARE DEPOSITED FOR NATA ONLY.                            
REMARK 245                                                                      
REMARK 245 DATA ACQUISITION                                                     
REMARK 245   DATE OF EXPERIMENT                : NULL                           
REMARK 245   NUMBER OF MICROGRAPHS-IMAGES      : NULL                           
REMARK 245   TEMPERATURE (KELVIN)              : NULL                           
REMARK 245   MICROSCOPE MODEL                  : FEI TITAN KRIOS                
REMARK 245   DETECTOR TYPE                     : FEI FALCON II (4K X 4K)        
REMARK 245   MINIMUM DEFOCUS (NM)              : NULL                           
REMARK 245   MAXIMUM DEFOCUS (NM)              : NULL                           
REMARK 245   MINIMUM TILT ANGLE (DEGREES)      : NULL                           
REMARK 245   MAXIMUM TILT ANGLE (DEGREES)      : NULL                           
REMARK 245   NOMINAL CS                        : NULL                           
REMARK 245   IMAGING MODE                      : BRIGHT FIELD                   
REMARK 245   ELECTRON DOSE (ELECTRONS NM**-2)  : 2.50                           
REMARK 245   ILLUMINATION MODE                 : FLOOD BEAM                     
REMARK 245   NOMINAL MAGNIFICATION             : NULL                           
REMARK 245   CALIBRATED MAGNIFICATION          : NULL                           
REMARK 245   SOURCE                            : FIELD EMISSION GUN             
REMARK 245   ACCELERATION VOLTAGE (KV)         : 300                            
REMARK 245   IMAGING DETAILS                   : NULL                           
REMARK 247                                                                      
REMARK 247 ELECTRON MICROSCOPY                                                  
REMARK 247  THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON          
REMARK 247  MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE              
REMARK 247  THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES           
REMARK 247  ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION         
REMARK 247  OF THE STRUCTURE FACTORS.                                           
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC                          
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC                   
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 10110 ANGSTROM**2                         
REMARK 350 SURFACE AREA OF THE COMPLEX: 61800 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -51.0 KCAL/MOL                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: t, u, v                               
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     MET t     1                                                      
REMARK 465     SER t     2                                                      
REMARK 465     ARG t     3                                                      
REMARK 465     LYS t     4                                                      
REMARK 465     ARG t     5                                                      
REMARK 465     SER t     6                                                      
REMARK 465     THR t     7                                                      
REMARK 465     LYS t     8                                                      
REMARK 465     PRO t     9                                                      
REMARK 465     LYS t    10                                                      
REMARK 465     PRO t    11                                                      
REMARK 465     ALA t    12                                                      
REMARK 465     ALA t    13                                                      
REMARK 465     LYS t    14                                                      
REMARK 465     ILE t    15                                                      
REMARK 465     ALA t    16                                                      
REMARK 465     MET u     1                                                      
REMARK 465     ILE u   237                                                      
REMARK 465     VAL u   238                                                      
REMARK 465     MET v     1                                                      
REMARK 465     GLY v     2                                                      
REMARK 465     ASP v    43                                                      
REMARK 465     SER v    44                                                      
REMARK 465     LEU v    45                                                      
REMARK 465     VAL v    46                                                      
REMARK 465     ALA v    47                                                      
REMARK 465     LYS v    48                                                      
REMARK 465     ASN v    49                                                      
REMARK 465     LYS v    50                                                      
REMARK 465     LYS v    51                                                      
REMARK 465     PRO v    52                                                      
REMARK 465     SER v    53                                                      
REMARK 465     SER v    54                                                      
REMARK 465     LYS v    55                                                      
REMARK 470                                                                      
REMARK 470 MISSING ATOM                                                         
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;           
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;          
REMARK 470 I=INSERTION CODE):                                                   
REMARK 470   M RES CSSEQI  ATOMS                                                
REMARK 470     LEU t  17    CG   CD1  CD2                                       
REMARK 470     LYS t  18    CG   CD   CE   NZ                                   
REMARK 470     LYS t  19    CG   CD   CE   NZ                                   
REMARK 470     LEU t  25    CG   CD1  CD2                                       
REMARK 470     LEU t  28    CG   CD1  CD2                                       
REMARK 470     GLN t  35    CG   CD   OE1  NE2                                  
REMARK 470     LYS t  38    CG   CD   CE   NZ                                   
REMARK 470     LEU t  40    CG   CD1  CD2                                       
REMARK 470     LYS t  41    CG   CD   CE   NZ                                   
REMARK 470     LEU t  42    CG   CD1  CD2                                       
REMARK 470     LYS t  48    CG   CD   CE   NZ                                   
REMARK 470     LYS t  49    CG   CD   CE   NZ                                   
REMARK 470     SER t  75    OG                                                  
REMARK 470     GLU t  85    CG   CD   OE1  OE2                                  
REMARK 470     SER t  88    OG                                                  
REMARK 470     LYS t 516    CG   CD   CE   NZ                                   
REMARK 470     LYS t 517    CG   CD   CE   NZ                                   
REMARK 470     LYS t 525    CG   CD   CE   NZ                                   
REMARK 470     LYS t 526    CG   CD   CE   NZ                                   
REMARK 470     GLU t 527    CG   CD   OE1  OE2                                  
REMARK 470     VAL t 528    CG1  CG2                                            
REMARK 470     GLU t 529    CG   CD   OE1  OE2                                  
REMARK 470     SER t 530    OG                                                  
REMARK 470     ASP t 531    CG   OD1  OD2                                       
REMARK 470     LYS t 532    CG   CD   CE   NZ                                   
REMARK 470     SER t 533    OG                                                  
REMARK 470     GLU t 534    CG   CD   OE1  OE2                                  
REMARK 470     LYS t 541    CG   CD   CE   NZ                                   
REMARK 470     ARG t 625    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     LYS t 626    CG   CD   CE   NZ                                   
REMARK 470     SER t 627    OG                                                  
REMARK 470     ASP t 628    CG   OD1  OD2                                       
REMARK 470     SER t 629    OG                                                  
REMARK 470     LEU t 630    CG   CD1  CD2                                       
REMARK 470     ASP t 631    CG   OD1  OD2                                       
REMARK 470     GLU t 632    CG   CD   OE1  OE2                                  
REMARK 470     ASN t 633    CG   OD1  ND2                                       
REMARK 470     SER t 634    OG                                                  
REMARK 470     ASP t 635    CG   OD1  OD2                                       
REMARK 470     GLU t 636    CG   CD   OE1  OE2                                  
REMARK 470     ILE t 637    CG1  CG2  CD1                                       
REMARK 470     GLN t 638    CG   CD   OE1  NE2                                  
REMARK 470     ASN t 639    CG   OD1  ND2                                       
REMARK 470     ASN t 640    CG   OD1  ND2                                       
REMARK 470     GLN t 642    CG   CD   OE1  NE2                                  
REMARK 470     ASN t 643    CG   OD1  ND2                                       
REMARK 470     SER t 644    OG                                                  
REMARK 470     SER t 645    OG                                                  
REMARK 470     GLN t 647    CG   CD   OE1  NE2                                  
REMARK 470     LYS t 648    CG   CD   CE   NZ                                   
REMARK 470     LYS t 649    CG   CD   CE   NZ                                   
REMARK 470     LYS t 650    CG   CD   CE   NZ                                   
REMARK 470     LYS t 652    CG   CD   CE   NZ                                   
REMARK 470     LYS t 653    CG   CD   CE   NZ                                   
REMARK 470     GLU t 654    CG   CD   OE1  OE2                                  
REMARK 470     MET t 658    CG   SD   CE                                        
REMARK 470     ASN t 659    CG   OD1  ND2                                       
REMARK 470     LYS t 660    CG   CD   CE   NZ                                   
REMARK 470     LYS t 662    CG   CD   CE   NZ                                   
REMARK 470     GLU t 663    CG   CD   OE1  OE2                                  
REMARK 470     THR t 664    OG1  CG2                                            
REMARK 470     GLU t 709    CD   OE1  OE2                                       
REMARK 470     LYS t 807    CG   CD   CE   NZ                                   
REMARK 470     SER u  57    OG                                                  
REMARK 470     ASP u  58    CG   OD1  OD2                                       
REMARK 470     GLU u  59    CG   CD   OE1  OE2                                  
REMARK 470     GLN u  60    CG   CD   OE1  NE2                                  
REMARK 470     ASP u  61    CG   OD1  OD2                                       
REMARK 470     GLU u  62    CG   CD   OE1  OE2                                  
REMARK 470     ASN u  63    CG   OD1  ND2                                       
REMARK 470     ASP u  64    CG   OD1  OD2                                       
REMARK 470     LYS u  65    CG   CD   CE   NZ                                   
REMARK 470     LEU u  66    CG   CD1  CD2                                       
REMARK 470     GLU u  67    CG   CD   OE1  OE2                                  
REMARK 470     LEU u  68    CG   CD1  CD2                                       
REMARK 470     THR u  69    OG1  CG2                                            
REMARK 470     LEU u  70    CG   CD1  CD2                                       
REMARK 470     ASP u  71    CG   OD1  OD2                                       
REMARK 470     THR u  73    OG1  CG2                                            
REMARK 470     ASN u  74    CG   OD1  ND2                                       
REMARK 470     ASP u  75    CG   OD1  OD2                                       
REMARK 470     ASP u 105    CG   OD1  OD2                                       
REMARK 470     GLN u 106    CG   CD   OE1  NE2                                  
REMARK 470     GLN u 107    CG   CD   OE1  NE2                                  
REMARK 470     LEU u 209    CG   CD1  CD2                                       
REMARK 470     LYS u 210    CG   CD   CE   NZ                                   
REMARK 470     GLU u 211    CG   CD   OE1  OE2                                  
REMARK 470     ASN u 212    CG   OD1  ND2                                       
REMARK 470     GLU u 213    CG   CD   OE1  OE2                                  
REMARK 470     SER u 222    OG                                                  
REMARK 470     ASP u 227    CG   OD1  OD2                                       
REMARK 470     ILE u 228    CG1  CG2  CD1                                       
REMARK 470     ILE u 229    CG1  CG2  CD1                                       
REMARK 470     LYS u 230    CG   CD   CE   NZ                                   
REMARK 470     GLN u 231    CG   CD   OE1  NE2                                  
REMARK 470     VAL u 233    CG1  CG2                                            
REMARK 470     ASN u 234    CG   OD1  ND2                                       
REMARK 470     ASP u 235    CG   OD1  OD2                                       
REMARK 470     ILE u 236    CG1  CG2  CD1                                       
REMARK 470     GLU v  42    CG   CD   OE1  OE2                                  
REMARK 470     LYS v  56    CG   CD   CE   NZ                                   
REMARK 470     LYS v  82    CG   CD   CE   NZ                                   
REMARK 470     GLN v  83    CG   CD   OE1  NE2                                  
REMARK 470     ASN v  84    CG   OD1  ND2                                       
REMARK 470     SER v  87    OG                                                  
REMARK 470     ASP v 164    CG   OD1  OD2                                       
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    LYS t  18      -58.79   -150.21                                   
REMARK 500    TYR t  36      -44.65   -131.15                                   
REMARK 500    SER t  52       37.41    -97.44                                   
REMARK 500    GLU t  85      -63.66   -101.25                                   
REMARK 500    ALA t  87       69.88   -107.06                                   
REMARK 500    ASP t 140       95.41    -67.95                                   
REMARK 500    LEU t 156       56.51   -115.03                                   
REMARK 500    ASN t 172      -70.66    -67.23                                   
REMARK 500    ALA t 189       56.33   -114.89                                   
REMARK 500    LYS t 192       42.89    -98.19                                   
REMARK 500    SER t 217     -131.48     59.19                                   
REMARK 500    LEU t 254      -93.84   -100.41                                   
REMARK 500    PRO t 342       28.53    -79.86                                   
REMARK 500    ALA t 343       20.35   -143.07                                   
REMARK 500    LYS t 356      -89.45   -157.69                                   
REMARK 500    PHE t 400      -45.81   -130.12                                   
REMARK 500    LEU t 449       76.16   -106.28                                   
REMARK 500    GLN t 450      -18.40   -149.45                                   
REMARK 500    LEU t 477      -60.34   -137.62                                   
REMARK 500    ASP t 482      -83.91   -126.71                                   
REMARK 500    ASP t 483       35.33    -94.04                                   
REMARK 500    ASN t 486     -163.09   -129.09                                   
REMARK 500    GLU t 495       71.94     58.90                                   
REMARK 500    SER t 497      -51.03   -154.56                                   
REMARK 500    VAL t 528     -123.17     58.19                                   
REMARK 500    ALA t 537      -16.11   -142.72                                   
REMARK 500    ALA t 560      -49.60   -147.00                                   
REMARK 500    SER t 629     -151.90     59.32                                   
REMARK 500    ASP t 631       75.86     56.01                                   
REMARK 500    GLN t 638     -139.78     57.39                                   
REMARK 500    ASN t 639     -131.35   -110.34                                   
REMARK 500    ASN t 643     -119.43     56.07                                   
REMARK 500    SER t 645       39.86   -156.28                                   
REMARK 500    SER t 646       75.18     55.29                                   
REMARK 500    ALA t 671      -46.13   -134.25                                   
REMARK 500    ARG t 708     -145.47    -84.86                                   
REMARK 500    ARG t 723       34.90    -92.30                                   
REMARK 500    PHE t 765     -134.34   -144.62                                   
REMARK 500    GLU t 780      -71.99    -87.10                                   
REMARK 500    ASN t 784      -50.99   -131.37                                   
REMARK 500    LYS t 804      -76.44    -82.44                                   
REMARK 500    TYR t 819       71.79   -108.11                                   
REMARK 500    SER t 827      -58.76   -151.36                                   
REMARK 500    LEU t 841     -159.10   -140.50                                   
REMARK 500    ASN u  23     -108.43   -136.72                                   
REMARK 500    GLU u  42       54.07    -95.95                                   
REMARK 500    ALA u  43      -46.97   -156.60                                   
REMARK 500    THR u  48     -164.21   -123.80                                   
REMARK 500    CYS u  54       84.16   -156.05                                   
REMARK 500    GLU u  55       80.10     54.38                                   
REMARK 500                                                                      
REMARK 500 THIS ENTRY HAS      98 RAMACHANDRAN OUTLIERS.                        
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 4XNH   RELATED DB: PDB                                   
REMARK 900 S. CEREVISIAE NATA COMPLEX                                           
REMARK 900 RELATED ID: 4KVM   RELATED DB: PDB                                   
REMARK 900 S. POMBE NATA COMPLEX                                                
REMARK 900 RELATED ID: EMD-0201   RELATED DB: EMDB                              
REMARK 900 CRYO-EM STRUCTURE OF THE RIBOSOME-NATA COMPLEX                       
DBREF  6HD5 t    1   854  UNP    P12945   NAT1_YEAST       1    854             
DBREF  6HD5 u    1   238  UNP    P07347   ARD1_YEAST       1    238             
DBREF  6HD5 v    1   176  UNP    Q08689   NAT5_YEAST       1    176             
SEQRES   1 t  854  MET SER ARG LYS ARG SER THR LYS PRO LYS PRO ALA ALA          
SEQRES   2 t  854  LYS ILE ALA LEU LYS LYS GLU ASN ASP GLN PHE LEU GLU          
SEQRES   3 t  854  ALA LEU LYS LEU TYR GLU GLY LYS GLN TYR LYS LYS SER          
SEQRES   4 t  854  LEU LYS LEU LEU ASP ALA ILE LEU LYS LYS ASP GLY SER          
SEQRES   5 t  854  HIS VAL ASP SER LEU ALA LEU LYS GLY LEU ASP LEU TYR          
SEQRES   6 t  854  SER VAL GLY GLU LYS ASP ASP ALA ALA SER TYR VAL ALA          
SEQRES   7 t  854  ASN ALA ILE ARG LYS ILE GLU GLY ALA SER ALA SER PRO          
SEQRES   8 t  854  ILE CYS CYS HIS VAL LEU GLY ILE TYR MET ARG ASN THR          
SEQRES   9 t  854  LYS GLU TYR LYS GLU SER ILE LYS TRP PHE THR ALA ALA          
SEQRES  10 t  854  LEU ASN ASN GLY SER THR ASN LYS GLN ILE TYR ARG ASP          
SEQRES  11 t  854  LEU ALA THR LEU GLN SER GLN ILE GLY ASP PHE LYS ASN          
SEQRES  12 t  854  ALA LEU VAL SER ARG LYS LYS TYR TRP GLU ALA PHE LEU          
SEQRES  13 t  854  GLY TYR ARG ALA ASN TRP THR SER LEU ALA VAL ALA GLN          
SEQRES  14 t  854  ASP VAL ASN GLY GLU ARG GLN GLN ALA ILE ASN THR LEU          
SEQRES  15 t  854  SER GLN PHE GLU LYS LEU ALA GLU GLY LYS ILE SER ASP          
SEQRES  16 t  854  SER GLU LYS TYR GLU HIS SER GLU CYS LEU MET TYR LYS          
SEQRES  17 t  854  ASN ASP ILE MET TYR LYS ALA ALA SER ASP ASN GLN ASP          
SEQRES  18 t  854  LYS LEU GLN ASN VAL LEU LYS HIS LEU ASN ASP ILE GLU          
SEQRES  19 t  854  PRO CYS VAL PHE ASP LYS PHE GLY LEU LEU GLU ARG LYS          
SEQRES  20 t  854  ALA THR ILE TYR MET LYS LEU GLY GLN LEU LYS ASP ALA          
SEQRES  21 t  854  SER ILE VAL TYR ARG THR LEU ILE LYS ARG ASN PRO ASP          
SEQRES  22 t  854  ASN PHE LYS TYR TYR LYS LEU LEU GLU VAL SER LEU GLY          
SEQRES  23 t  854  ILE GLN GLY ASP ASN LYS LEU LYS LYS ALA LEU TYR GLY          
SEQRES  24 t  854  LYS LEU GLU GLN PHE TYR PRO ARG CYS GLU PRO PRO LYS          
SEQRES  25 t  854  PHE ILE PRO LEU THR PHE LEU GLN ASP LYS GLU GLU LEU          
SEQRES  26 t  854  SER LYS LYS LEU ARG GLU TYR VAL LEU PRO GLN LEU GLU          
SEQRES  27 t  854  ARG GLY VAL PRO ALA THR PHE SER ASN VAL LYS PRO LEU          
SEQRES  28 t  854  TYR GLN ARG ARG LYS SER LYS VAL SER PRO LEU LEU GLU          
SEQRES  29 t  854  LYS ILE VAL LEU ASP TYR LEU SER GLY LEU ASP PRO THR          
SEQRES  30 t  854  GLN ASP PRO ILE PRO PHE ILE TRP THR ASN TYR TYR LEU          
SEQRES  31 t  854  SER GLN HIS PHE LEU PHE LEU LYS ASP PHE PRO LYS ALA          
SEQRES  32 t  854  GLN GLU TYR ILE ASP ALA ALA LEU ASP HIS THR PRO THR          
SEQRES  33 t  854  LEU VAL GLU PHE TYR ILE LEU LYS ALA ARG ILE LEU LYS          
SEQRES  34 t  854  HIS LEU GLY LEU MET ASP THR ALA ALA GLY ILE LEU GLU          
SEQRES  35 t  854  GLU GLY ARG GLN LEU ASP LEU GLN ASP ARG PHE ILE ASN          
SEQRES  36 t  854  CYS LYS THR VAL LYS TYR PHE LEU ARG ALA ASN ASN ILE          
SEQRES  37 t  854  ASP LYS ALA VAL GLU VAL ALA SER LEU PHE THR LYS ASN          
SEQRES  38 t  854  ASP ASP SER VAL ASN GLY ILE LYS ASP LEU HIS LEU VAL          
SEQRES  39 t  854  GLU ALA SER TRP PHE ILE VAL GLU GLN ALA GLU ALA TYR          
SEQRES  40 t  854  TYR ARG LEU TYR LEU ASP ARG LYS LYS LYS LEU ASP ASP          
SEQRES  41 t  854  LEU ALA SER LEU LYS LYS GLU VAL GLU SER ASP LYS SER          
SEQRES  42 t  854  GLU GLN ILE ALA ASN ASP ILE LYS GLU ASN GLN TRP LEU          
SEQRES  43 t  854  VAL ARG LYS TYR LYS GLY LEU ALA LEU LYS ARG PHE ASN          
SEQRES  44 t  854  ALA ILE PRO LYS PHE TYR LYS GLN PHE GLU ASP ASP GLN          
SEQRES  45 t  854  LEU ASP PHE HIS SER TYR CYS MET ARG LYS GLY THR PRO          
SEQRES  46 t  854  ARG ALA TYR LEU GLU MET LEU GLU TRP GLY LYS ALA LEU          
SEQRES  47 t  854  TYR THR LYS PRO MET TYR VAL ARG ALA MET LYS GLU ALA          
SEQRES  48 t  854  SER LYS LEU TYR PHE GLN MET HIS ASP ASP ARG LEU LYS          
SEQRES  49 t  854  ARG LYS SER ASP SER LEU ASP GLU ASN SER ASP GLU ILE          
SEQRES  50 t  854  GLN ASN ASN GLY GLN ASN SER SER SER GLN LYS LYS LYS          
SEQRES  51 t  854  ALA LYS LYS GLU ALA ALA ALA MET ASN LYS ARG LYS GLU          
SEQRES  52 t  854  THR GLU ALA LYS SER VAL ALA ALA TYR PRO SER ASP GLN          
SEQRES  53 t  854  ASP ASN ASP VAL PHE GLY GLU LYS LEU ILE GLU THR SER          
SEQRES  54 t  854  THR PRO MET GLU ASP PHE ALA THR GLU PHE TYR ASN ASN          
SEQRES  55 t  854  TYR SER MET GLN VAL ARG GLU ASP GLU ARG ASP TYR ILE          
SEQRES  56 t  854  LEU ASP PHE GLU PHE ASN TYR ARG ILE GLY LYS LEU ALA          
SEQRES  57 t  854  LEU CYS PHE ALA SER LEU ASN LYS PHE ALA LYS ARG PHE          
SEQRES  58 t  854  GLY THR THR SER GLY LEU PHE GLY SER MET ALA ILE VAL          
SEQRES  59 t  854  LEU LEU HIS ALA THR ARG ASN ASP THR PRO PHE ASP PRO          
SEQRES  60 t  854  ILE LEU LYS LYS VAL VAL THR LYS SER LEU GLU LYS GLU          
SEQRES  61 t  854  TYR SER GLU ASN PHE PRO LEU ASN GLU ILE SER ASN ASN          
SEQRES  62 t  854  SER PHE ASP TRP LEU ASN PHE TYR GLN GLU LYS PHE GLY          
SEQRES  63 t  854  LYS ASN ASP ILE ASN GLY LEU LEU PHE LEU TYR ARG TYR          
SEQRES  64 t  854  ARG ASP ASP VAL PRO ILE GLY SER SER ASN LEU LYS GLU          
SEQRES  65 t  854  MET ILE ILE SER SER LEU SER PRO LEU GLU PRO HIS SER          
SEQRES  66 t  854  GLN ASN GLU ILE LEU GLN TYR TYR LEU                          
SEQRES   1 u  238  MET PRO ILE ASN ILE ARG ARG ALA THR ILE ASN ASP ILE          
SEQRES   2 u  238  ILE CYS MET GLN ASN ALA ASN LEU HIS ASN LEU PRO GLU          
SEQRES   3 u  238  ASN TYR MET MET LYS TYR TYR MET TYR HIS ILE LEU SER          
SEQRES   4 u  238  TRP PRO GLU ALA SER PHE VAL ALA THR THR THR THR LEU          
SEQRES   5 u  238  ASP CYS GLU ASP SER ASP GLU GLN ASP GLU ASN ASP LYS          
SEQRES   6 u  238  LEU GLU LEU THR LEU ASP GLY THR ASN ASP GLY ARG THR          
SEQRES   7 u  238  ILE LYS LEU ASP PRO THR TYR LEU ALA PRO GLY GLU LYS          
SEQRES   8 u  238  LEU VAL GLY TYR VAL LEU VAL LYS MET ASN ASP ASP PRO          
SEQRES   9 u  238  ASP GLN GLN ASN GLU PRO PRO ASN GLY HIS ILE THR SER          
SEQRES  10 u  238  LEU SER VAL MET ARG THR TYR ARG ARG MET GLY ILE ALA          
SEQRES  11 u  238  GLU ASN LEU MET ARG GLN ALA LEU PHE ALA LEU ARG GLU          
SEQRES  12 u  238  VAL HIS GLN ALA GLU TYR VAL SER LEU HIS VAL ARG GLN          
SEQRES  13 u  238  SER ASN ARG ALA ALA LEU HIS LEU TYR ARG ASP THR LEU          
SEQRES  14 u  238  ALA PHE GLU VAL LEU SER ILE GLU LYS SER TYR TYR GLN          
SEQRES  15 u  238  ASP GLY GLU ASP ALA TYR ALA MET LYS LYS VAL LEU LYS          
SEQRES  16 u  238  LEU GLU GLU LEU GLN ILE SER ASN PHE THR HIS ARG ARG          
SEQRES  17 u  238  LEU LYS GLU ASN GLU GLU LYS LEU GLU ASP ASP LEU GLU          
SEQRES  18 u  238  SER ASP LEU LEU GLU ASP ILE ILE LYS GLN GLY VAL ASN          
SEQRES  19 u  238  ASP ILE ILE VAL                                              
SEQRES   1 v  176  MET GLY ARG ASP ILE CYS THR LEU ASP ASN VAL TYR ALA          
SEQRES   2 v  176  ASN ASN LEU GLY MET LEU THR LYS LEU ALA HIS VAL THR          
SEQRES   3 v  176  VAL PRO ASN LEU TYR GLN ASP ALA PHE PHE SER ALA LEU          
SEQRES   4 v  176  PHE ALA GLU ASP SER LEU VAL ALA LYS ASN LYS LYS PRO          
SEQRES   5 v  176  SER SER LYS LYS ASP VAL HIS PHE THR GLN MET ALA TYR          
SEQRES   6 v  176  TYR SER GLU ILE PRO VAL GLY GLY LEU VAL ALA LYS LEU          
SEQRES   7 v  176  VAL PRO LYS LYS GLN ASN GLU LEU SER LEU LYS GLY ILE          
SEQRES   8 v  176  GLN ILE GLU PHE LEU GLY VAL LEU PRO ASN TYR ARG HIS          
SEQRES   9 v  176  LYS SER ILE GLY SER LYS LEU LEU LYS PHE ALA GLU ASP          
SEQRES  10 v  176  LYS CYS SER GLU CYS HIS GLN HIS ASN VAL PHE VAL TYR          
SEQRES  11 v  176  LEU PRO ALA VAL ASP ASP LEU THR LYS GLN TRP PHE ILE          
SEQRES  12 v  176  ALA HIS GLY PHE GLU GLN VAL GLY GLU THR VAL ASN ASN          
SEQRES  13 v  176  PHE ILE LYS GLY VAL ASN GLY ASP GLU GLN ASP ALA ILE          
SEQRES  14 v  176  LEU LEU LYS LYS HIS ILE SER                                  
HELIX    1 AA1 LYS t   18  GLY t   33  1                                  16    
HELIX    2 AA2 TYR t   36  ASP t   50  1                                  15    
HELIX    3 AA3 HIS t   53  GLY t   68  1                                  16    
HELIX    4 AA4 LYS t   70  LYS t   83  1                                  14    
HELIX    5 AA5 SER t   90  THR t  104  1                                  15    
HELIX    6 AA6 TYR t  107  SER t  122  1                                  16    
HELIX    7 AA7 LYS t  125  GLY t  139  1                                  15    
HELIX    8 AA8 PHE t  141  PHE t  155  1                                  15    
HELIX    9 AA9 TYR t  158  GLY t  173  1                                  16    
HELIX   10 AB1 GLU t  174  ALA t  189  1                                  16    
HELIX   11 AB2 ASP t  195  ALA t  215  1                                  21    
HELIX   12 AB3 ASN t  219  GLU t  234  1                                  16    
HELIX   13 AB4 LYS t  240  GLY t  255  1                                  16    
HELIX   14 AB5 GLN t  256  ASN t  271  1                                  16    
HELIX   15 AB6 ASN t  274  GLY t  286  1                                  13    
HELIX   16 AB7 ASP t  290  GLN t  303  1                                  14    
HELIX   17 AB8 GLU t  309  ILE t  314  1                                   6    
HELIX   18 AB9 PRO t  315  PHE t  318  5                                   4    
HELIX   19 AC1 ASP t  321  GLY t  340  1                                  20    
HELIX   20 AC2 ALA t  343  VAL t  348  1                                   6    
HELIX   21 AC3 VAL t  348  ARG t  355  1                                   8    
HELIX   22 AC4 VAL t  359  SER t  372  1                                  14    
HELIX   23 AC5 ASP t  379  LEU t  397  1                                  19    
HELIX   24 AC6 PHE t  400  THR t  414  1                                  15    
HELIX   25 AC7 LEU t  417  LEU t  431  1                                  15    
HELIX   26 AC8 LEU t  433  GLN t  446  1                                  14    
HELIX   27 AC9 ARG t  452  ARG t  464  1                                  13    
HELIX   28 AD1 ILE t  468  SER t  476  1                                   9    
HELIX   29 AD2 GLY t  487  VAL t  494  1                                   8    
HELIX   30 AD3 SER t  497  LYS t  525  1                                  29    
HELIX   31 AD4 ASP t  531  ILE t  536  1                                   6    
HELIX   32 AD5 ALA t  537  ASN t  559  1                                  23    
HELIX   33 AD6 ALA t  560  ASP t  571  1                                  12    
HELIX   34 AD7 ASP t  574  LYS t  582  1                                   9    
HELIX   35 AD8 THR t  584  LEU t  598  1                                  15    
HELIX   36 AD9 LYS t  601  SER t  627  1                                  27    
HELIX   37 AE1 SER t  646  VAL t  669  1                                  24    
HELIX   38 AE2 THR t  690  PHE t  699  1                                  10    
HELIX   39 AE3 TYR t  700  GLN t  706  1                                   7    
HELIX   40 AE4 ASP t  713  ARG t  723  1                                  11    
HELIX   41 AE5 LEU t  727  PHE t  741  1                                  15    
HELIX   42 AE6 SER t  745  THR t  759  1                                  15    
HELIX   43 AE7 ASP t  766  TYR t  781  1                                  16    
HELIX   44 AE8 ASP t  796  PHE t  805  1                                  10    
HELIX   45 AE9 ILE t  810  TYR t  819  1                                  10    
HELIX   46 AF1 SER t  827  LEU t  838  1                                  12    
HELIX   47 AF2 GLU t  842  TYR t  852  1                                  11    
HELIX   48 AF3 THR u    9  ASN u   11  5                                   3    
HELIX   49 AF4 ASP u   12  HIS u   22  1                                  11    
HELIX   50 AF5 MET u   29  SER u   39  1                                  11    
HELIX   51 AF6 ILE u  129  HIS u  145  1                                  17    
HELIX   52 AF7 ASN u  158  ARG u  166  1                                   9    
HELIX   53 AF8 ILE u  201  THR u  205  5                                   5    
HELIX   54 AF9 ASN v   15  ALA v   23  1                                   9    
HELIX   55 AG1 ASP v   33  ALA v   38  1                                   6    
HELIX   56 AG2 SER v  106  CYS v  122  1                                  17    
HELIX   57 AG3 ASP v  136  PHE v  147  1                                  12    
SHEET    1 AA1 4 ASN u   4  ARG u   7  0                                        
SHEET    2 AA1 4 PHE u  45  THR u  48 -1  O  VAL u  46   N  ARG u   6           
SHEET    3 AA1 4 GLU u  90  MET u 100 -1  O  GLY u  94   N  ALA u  47           
SHEET    4 AA1 4 TYR u  85  ALA u  87 -1  N  LEU u  86   O  GLU u  90           
SHEET    1 AA2 7 ASN u   4  ARG u   7  0                                        
SHEET    2 AA2 7 PHE u  45  THR u  48 -1  O  VAL u  46   N  ARG u   6           
SHEET    3 AA2 7 GLU u  90  MET u 100 -1  O  GLY u  94   N  ALA u  47           
SHEET    4 AA2 7 GLY u 113  VAL u 120 -1  O  SER u 117   N  LEU u  97           
SHEET    5 AA2 7 TYR u 149  VAL u 154  1  O  TYR u 149   N  GLY u 113           
SHEET    6 AA2 7 ALA u 187  VAL u 193 -1  O  TYR u 188   N  VAL u 154           
SHEET    7 AA2 7 VAL u 173  GLU u 177 -1  N  GLU u 177   O  ALA u 187           
SHEET    1 AA3 7 CYS v   6  ASP v   9  0                                        
SHEET    2 AA3 7 VAL v  58  TYR v  66 -1  O  MET v  63   N  ASP v   9           
SHEET    3 AA3 7 PRO v  70  LEU v  78 -1  O  LEU v  78   N  VAL v  58           
SHEET    4 AA3 7 ILE v  91  VAL v  98 -1  O  GLN v  92   N  LYS v  77           
SHEET    5 AA3 7 VAL v 127  PRO v 132  1  O  PHE v 128   N  ILE v  93           
SHEET    6 AA3 7 GLU v 165  LYS v 173 -1  O  ILE v 169   N  LEU v 131           
SHEET    7 AA3 7 GLU v 148  GLN v 149 -1  N  GLU v 148   O  LYS v 172           
SHEET    1 AA4 7 CYS v   6  ASP v   9  0                                        
SHEET    2 AA4 7 VAL v  58  TYR v  66 -1  O  MET v  63   N  ASP v   9           
SHEET    3 AA4 7 PRO v  70  LEU v  78 -1  O  LEU v  78   N  VAL v  58           
SHEET    4 AA4 7 ILE v  91  VAL v  98 -1  O  GLN v  92   N  LYS v  77           
SHEET    5 AA4 7 VAL v 127  PRO v 132  1  O  PHE v 128   N  ILE v  93           
SHEET    6 AA4 7 GLU v 165  LYS v 173 -1  O  ILE v 169   N  LEU v 131           
SHEET    7 AA4 7 VAL v 154  LYS v 159 -1  N  PHE v 157   O  GLN v 166           
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000                         
(ATOM LINES ARE NOT SHOWN.)
END                                                                             
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