KEGG   Paracoccus denitrificans: Pden_0951
Entry
Pden_0951         CDS       T00440                                 
Name
(GenBank) ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
pde  Paracoccus denitrificans
Pathway
pde00230  Purine metabolism
pde00240  Pyrimidine metabolism
pde01100  Metabolic pathways
pde01232  Nucleotide metabolism
Module
pde_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
pde_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:pde00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    Pden_0951
   00240 Pyrimidine metabolism
    Pden_0951
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pde03400]
    Pden_0951
Enzymes [BR:pde01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     Pden_0951
DNA repair and recombination proteins [BR:pde03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    Pden_0951
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_lgN zf-RRN7
Other DBs
NCBI-ProteinID: ABL69062
UniProt: A1B0L8
Position
1:complement(935339..937603)
AA seq 754 aa
MSRFSAPIAEQIWDMKYRLKDSGGQPADLSVEDSWRRVARDLARVEKDPALWEDRFYAAL
EDFKFLPAGRILAGAGTGREVTLFNCFVMGTIPDSMAGIFDMLKEAALTMQQGGGIGYDF
STIRPRGAEVKGVAADASGPLSFMDVWDAMCRTIMSAGSRRGAMMATMRCDHPDIEAFIE
AKQDSARLRMFNLSVLVTDAFMEAVKADGPWDLQFGGKVYHTVRARDLWNRIMRATYDYA
EPGVIFIDRINQQNNLNYAETVAATNPCGEQPLPPYGACLLGSVNLARLVEAPFTAHARL
NPEALDELVRTAVRMMDNVVDASKFPLPQQSAEAQAKRRIGLGVTGLADALLMLGLRYGA
ADAVEQTRVWMKAIARSAYLASVDLAREKGAFPLFDAKKYLASGFMRRMDADLREAVARH
GIRNALLTSIAPTGTISLYAGNVSSGIEPVFAYAYTRKVLQKDGSRTEEEVVDYAVQMWR
DLKGDAPLPDYFVNAQTLAPLDHVAMQAAAQEWVDSSISKTINCPEDISFEDFKDVYLAA
WDKGCKGCTTYRPNEVTGSVLSVSEKTEEAPQADKGADVVYLTEPLDRPAALEGATYKLK
FPGSEHAIYITINDIVQGGHRRPFEVFINSKNMEHFAWTVALTRMISAVFRRGGDVSFVV
EELKAVFDPRGGAWIEGRYVPSILAAIGGVIERHMIATGFLAGEGMGLKSDPKAEVMAVG
ERPRGPACPACGQYGMRMIEGCMTCPSCGHSKCG
NT seq 2265 nt   +upstreamnt  +downstreamnt
atgagccgattctcagcccctatcgccgaacagatctgggacatgaaataccggctcaag
gacagcggcggccagcccgccgacctgtcggtcgaggacagctggcgccgcgtcgcccgc
gaccttgcccgcgtcgaaaaggatccggcgctgtgggaggaccgcttctatgccgcgctg
gaggatttcaagttcctgcccgccggccgcatccttgccggcgccggcaccgggcgtgag
gtgacgctgttcaactgcttcgtcatgggcaccatccccgacagcatggccggcatcttc
gacatgctgaaagaggccgcgctgaccatgcagcagggcggcggcatcggctacgatttc
agcaccatccgcccgcgcggggccgaggtgaagggcgtggccgccgacgcctcgggaccg
ctgtccttcatggatgtctgggacgccatgtgccgcaccatcatgtccgcgggctcgcgc
cgcggcgcgatgatggcgacgatgcgctgcgaccaccccgacatcgaggccttcatcgag
gccaagcaggacagcgcccgactgcgcatgttcaacctgtcggtgctggtcacggatgcc
ttcatggaggcggtcaaggccgacggcccctgggatctgcaattcggcggcaaggtctat
cacaccgttcgggcgcgcgacctgtggaaccgcatcatgcgcgcgacctatgactatgcc
gagccgggcgtgatcttcatcgaccgcatcaaccagcagaacaacctgaactatgccgag
accgtcgcggcgacgaacccttgcggcgaacagcccctgccgccctatggcgcctgcctc
ctgggctcggtcaaccttgcccggctggtcgaggcgcccttcaccgcgcatgcacgcctg
aaccccgaggcgctggacgaactggtccgcaccgcggtgcggatgatggacaacgtcgtc
gatgcctcgaaattcccgctgccgcagcagtcggccgaggcgcaggccaagcgccgcatc
gggctgggcgtcaccgggctggccgatgcgctgctgatgctgggcctgcgctatggcgca
gcagacgcggtcgagcagacgcgagtgtggatgaaggccatcgcgcgctcggcctatctg
gcctcggtcgatctggcccgcgaaaagggcgccttcccgctgttcgacgccaagaaatac
ctggcctcgggcttcatgcgccgcatggatgcggatctgcgcgaggcggtggcccggcac
ggcatccgcaacgcgctgctgaccagcatcgcgccgaccgggacgatcagcctttacgcc
ggcaatgtcagctcgggcatcgagccggtctttgcctatgcctatacccgcaaggtgctg
caaaaggacggctcgcgcaccgaggaggaggtcgtggattacgccgtgcagatgtggcgc
gacctcaagggcgacgcgccgctgccggattacttcgtcaacgcccagacgctggcgccg
ctggaccatgtcgccatgcaggcggcggcacaggaatgggtggacagctcgatctccaag
accatcaactgccccgaggacatctcattcgaggatttcaaggacgtctacctggccgca
tgggacaagggctgcaagggctgcaccacctatcggccgaacgaggtcaccggctcggtc
ctgtcggtcagcgaaaagaccgaggaggcgccgcaggccgacaagggcgccgacgtggtc
tatctgaccgagccgctggaccggccggcagcgctggagggtgcgacctacaagctgaaa
ttccccggcagcgagcacgcgatctatatcaccatcaacgacatcgtgcagggcgggcat
cgccggccgttcgaggtgttcatcaactcgaagaacatggagcatttcgcctggaccgtg
gcgctgacgcggatgatctcggccgtgttccggcgcggcggcgacgtgtctttcgtggtc
gaggagttgaaggcggtcttcgacccgcgcggcggcgcctggatcgaggggcgctatgtg
ccctcgatcctcgccgccatcggcggggtgatcgagcggcacatgatcgccacggggttc
ctggccggcgaagggatggggctgaaatccgatcccaaggccgaggtcatggcggtgggc
gaacgtccgcgcggcccggcctgcccggcctgcggccaatacggcatgcgcatgatcgag
ggctgcatgacctgcccctcctgcggccattcgaaatgcggctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (49)   

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