KEGG   Paracoccus denitrificans: Pden_1477
Entry
Pden_1477         CDS       T00440                                 
Name
(GenBank) Conjugal transfer protein
  KO
K20531  type IV secretion system protein TrbF
Organism
pde  Paracoccus denitrificans
Pathway
pde02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:pde00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Pden_1477
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pde02044]
    Pden_1477
Secretion system [BR:pde02044]
 Type IV secretion system
  Trb secretion system protein
   Pden_1477
SSDB
Motif
Pfam: VirB8 FAM165
Other DBs
NCBI-ProteinID: ABL69577
UniProt: A1B233
Position
1:complement(1438642..1439331)
AA seq 229 aa
MNLFRRSATHYGKTPQPETPYQRAAQVWDERIGSARVQARNWRYIAFGSLILAAGFAGAL
VWQSARGTVVPWVVQVDALGEAQAVVPASADYEPTDPQIAFHLGRLIEQVRSIPADPIIV
RQNWLRAYEFTTDRGAAALNDFARANDPFTRVGRQQIAVEVSSVIRASPGSFRVAWTERH
YENGQLSTTERWTAILTVVIQTPRSAERLRANPLGIYVNAISWSREMSQ
NT seq 690 nt   +upstreamnt  +downstreamnt
atgaacctcttcaggcgttctgccacgcattatggcaagacacctcaaccagagacgccc
tatcagagggccgcgcaggtctgggatgagcgtatcggctccgcccgtgttcaggcccgc
aactggcgctacatcgccttcggcagcctgatcctggcggcgggttttgctggcgccctg
gtctggcaatccgcgcgtggcactgtcgtgccctgggtcgttcaggtcgacgcgctcggc
gaggcccaggctgtcgtgccagcctccgccgactacgagccgaccgatccgcagatcgcc
ttccatctcggccgcctcatcgaacaggtccggtcgatccctgccgatccgatcatcgtg
cggcaaaactggctgcgcgcctatgagttcaccacggatcgaggcgcggctgcgctgaac
gatttcgcccgcgcgaacgacccgttcacacgcgtcggtcgtcaacagatcgctgtcgag
gtgtcctcagtcatccgggcctcgccgggatcgttccgcgtcgcctggaccgaacgccac
tacgagaacggtcagctttccacgaccgagcgctggaccgcgatcctgaccgtcgtgatc
cagaccccgcgcagcgccgagcgcctgcgcgccaatcccctcggaatctatgtcaatgcg
atctcctggtcgcgggaaatgagccaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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