KEGG   Paracoccus denitrificans: Pden_1478
Entry
Pden_1478         CDS       T00440                                 
Name
(GenBank) TrbL/VirB6 plasmid conjugal transfer protein
  KO
K07344  type IV secretion system protein TrbL
Organism
pde  Paracoccus denitrificans
Pathway
pde02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:pde00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Pden_1478
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pde02044]
    Pden_1478
Secretion system [BR:pde02044]
 Type IV secretion system
  Trb secretion system protein
   Pden_1478
SSDB
Motif
Pfam: TrbL
Other DBs
NCBI-ProteinID: ABL69578
UniProt: A1B234
Position
1:complement(1439328..1440680)
AA seq 450 aa
MGGTGVIDNFLGIFTSYIDSGFGLLGGEVAFIATTLIVIDVTLAALFWAWGADDDIIARL
VKKTLFVGVFAYIISNWNNLARIVFESFAGLGLMASGTGFSAADLLRPGRVAQTGLEAGR
PLLESISDLMGWVAVFENLVQILCLFFAWALVILAFFILAVQLFVTLIEFKLTTLAGFVL
IPFGLFGKTAFMAERVLGNVISSGIKVLVLAVIIGIGSTLFGQFTAGFGGVTPTIDDAMA
IVLAALSLLGLGIFGPGIASGLVSGGPQLSAGAAIGTGLAVGGAAIGAGGATMLAARGAG
SALSGGTALARGGATAAGAASSAYTLGSMGGGGLPGGMAGVARAGAAAAASPLKKASSRA
AGGIQSSYAEGVKGGVVATGGTTSMGTVGGAAPEPGSSGPSATDGPPAWAKRMRHSQAVS
HGVRAAAHAVRSGDSHGSGSSVNLSERDRS
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgggtggaaccggcgtcatcgacaactttctgggcatcttcaccagctatatcgacagc
gggttcgggctgctcgggggtgaggtggccttcatcgccaccacgctgatcgtgatcgac
gtgacgctggcggccctgttctgggcttggggcgccgatgatgacatcattgcccggctg
gtgaagaagacgctcttcgtcggcgtcttcgcctatatcatctccaactggaacaacctc
gcccggattgtcttcgagagcttcgcgggcctcggtctgatggcctcgggcaccggattt
tccgccgccgatcttttgcgtcccggccgcgtcgcccagaccgggctcgaggcggggcgg
ccgctgctcgaaagcatctccgatctgatgggctgggtcgcggtctttgagaacctcgtc
cagattctctgcctgttcttcgcctgggcgctggtgatcctcgccttcttcatcctcgcg
gttcagctcttcgtcacactgatcgagttcaagctcacgaccctcgcgggcttcgtgctg
atccccttcggcctcttcggcaagaccgccttcatggccgagcgcgtgctgggcaacgtc
atctcgtccggcatcaaggttctcgtcctcgccgtgatcatcggcatcggatccacgctc
ttcggtcagttcaccgccggcttcggcggcgtgacgccgaccattgatgacgccatggcg
attgttctcgctgccctgtctctgctgggcctcggtatcttcggccccggcatcgcctca
ggtctggtgtccggcgggccgcaactcagcgcgggggcggccataggcaccggccttgcc
gttggtggtgctgcgatcggcgccggaggggcgaccatgctggctgcacgcggagccgga
tctgcactctccggaggcaccgccctcgcacgcggcggcgctaccgcggcgggtgctgcc
tcgagcgcctacacgcttggctcgatgggcggaggaggtctcccaggcgggatggctggt
gtagcgcgcgccggggccgctgccgcggcatcaccgctcaagaaggcgtcctctcgcgcg
gctggcggcatccagtccagctacgccgagggcgtcaagggcggtgtggtggcgacgggc
ggcaccacctcgatgggcacggtcggcggcgcggcgcccgagcctggcagctccggcccg
tccgccaccgatggcccgccggcctgggcgaaacgcatgcgccatagccaggccgtgagc
catggcgtgcgcgctgccgctcatgccgtccggtccggcgacagccacggctcgggctcc
tccgtcaatctctccgaaagggaccgctcatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (27)   

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