KEGG   Paracoccus denitrificans: Pden_3188
Entry
Pden_3188         CDS       T00440                                 
Name
(GenBank) TRAG family protein
  KO
K03205  type IV secretion system protein VirD4 [EC:7.4.2.8]
Organism
pde  Paracoccus denitrificans
Pathway
pde03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pde00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Pden_3188
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pde02044]
    Pden_3188
Enzymes [BR:pde01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     Pden_3188
Secretion system [BR:pde02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   Pden_3188
SSDB
Motif
Pfam: T4SS-DNA_transf TraG-D_C TrwB_AAD_bind
Other DBs
NCBI-ProteinID: ABL71269
UniProt: A1B6X5
Position
2:354719..356728
AA seq 669 aa
MSGTKILWGQIAVVFLIVLISVWSGTQWAAWRLGFQPQLGPAWFELWGIPIYYPPALFWW
WYFYDAYAPRIFAEGGVIAASGGFLAIGVAITLSVMRAREAADVDTYGSARWAARPEIER
AGLLGPDGVVLGKLGEDYLRHDGPEHVLCFAPTRSGKGVGLVVPTLLTWPGSTIVHDIKG
ENWQLTAGFRARHGRVLLFDPTNAASAAYNPLQEVRRGEWEVRDVQNIADILVDPEGSLE
KRNHWEKTSHALLVGVILHVLYAEEDKTLARVAAFLSDPRRSIEATLAAMMKTPHLGEAG
PHPVIASAARELLNKSENERSGVLSTAMSFLGLYRDPVVAQVTSRCDWRIADLIAAEKPS
TLYLVVPPSDISRTKPLIRLVLNQIGRRLTEDLHAKDRGHRVLMLLDEFPALGRLDFFES
ALAFMAGYGLKAFLIAQSLNQIEKAYGPNNSILDNCHVRVSFATNDERTAKRVSDALGTA
TEMKAMKNYAGHRLAPWLGHIMVSRSETARPLLTPGEVMQLPPEDEIVMVAGTPPIRARK
ARYYTDPRFRERMLSPPDPREAVPSARADDWTGLTPPKPDGLVEKTDVKKEEGRAKRQDK
ANSGLRREPELPEHVEIVHERKEPSPEDEFRHLLGDDQEDAVRQRQALRRKMAGVARQTS
MDPGDDIPM
NT seq 2010 nt   +upstreamnt  +downstreamnt
atgtccggcacgaagatcctctggggccagatcgccgtggttttcctgatcgtgctgatc
tcggtctggtcgggcacgcaatgggcggcctggcggctcggcttccagccccagctcggc
ccggcctggttcgaactctggggtatcccgatctattacccgcccgccctgttctggtgg
tggtacttttacgacgcctatgccccgcgcatctttgccgagggcggcgtcatcgccgcc
tcgggcgggtttctcgccatcggtgtcgccatcaccctgtcggtgatgcgcgcccgcgag
gccgccgatgtcgacacctacggctcggcgcgttgggcagcgcggccggagatcgagcgg
gcggggctgctcggccccgacggcgtggtgctgggcaagctgggcgaggactacctgcgc
catgacgggccggagcatgtgctttgcttcgcgccgacgcgctccggcaagggcgttggg
ctggtggtgccgacgctgctgacctggccgggctcgaccatcgtccacgacatcaagggc
gagaactggcagctcaccgcagggttcagggccaggcatggccgggtattgctctttgat
ccgaccaatgcggcctccgctgcctacaatcccctgcaggaggtgcggcgcggcgaatgg
gaggtgcgcgacgtccagaacatcgccgatatcctggtcgatcccgagggctcgctggaa
aagcgcaaccattgggaaaagaccagccacgccctgctggtcggcgtcatcctgcatgtg
ctctatgccgaggaggacaagaccctggcgcgcgtcgccgccttcctctccgacccgcgc
cgctcgatcgaggcgacgctggcggcgatgatgaagaccccgcatctcggcgaggccggc
ccgcatccggtcatcgccagcgccgcgcgggaactgctgaacaaatccgagaacgaacgc
tcaggcgtgctgtccaccgccatgtccttcctcggcctctatcgcgaccccgtcgtcgcc
caggtcaccagccgctgcgactggcgtatcgccgatctgatcgcggcggaaaaaccctcg
acgctttacctggtggtcccgccctcggatatctcgcgcaccaagccgctgatccggctg
gtgctgaaccagatcggccgcaggctgaccgaggatctgcatgcgaaggaccgcgggcac
cgggtgctgatgctgctcgacgaattcccggcgctggggcggctggacttcttcgaatcc
gccctggccttcatggccggctatgggctgaaggctttcctgatcgcgcagtcgctgaac
cagatcgaaaaggcctatggccccaacaattcgatcctcgacaactgccatgtccgggtc
agcttcgccaccaacgacgagcgcaccgccaagcgggtctcggacgccctcggcaccgcc
accgagatgaaggcgatgaagaactatgccgggcaccggctggcgccctggctcgggcat
atcatggtctcgcgctccgagaccgcgcggccgctgctcaccccgggcgaggtgatgcag
ctgccgcccgaagacgagatcgtcatggtggccggcaccccgccgatccgggccaggaag
gcgcgctactataccgatccgcgtttccgcgagcggatgctgtccccgccggatccgcgc
gaggctgtgccgtcggcgcgggcggacgactggaccgggctgacgccgccgaagccggat
ggtttggtcgaaaaaacggacgtcaaaaaagaagagggcagggcgaagcgccaggacaag
gccaattccggcctgcgccgcgagccggaactgcccgagcatgtcgagatcgtccacgag
aggaaggaaccatcgccggaggacgagttcaggcatctgctcggcgacgatcaggaggat
gcggtccggcaacgccaggccctgcgccgcaagatggctggtgttgcccggcagacctcg
atggatcccggcgacgacatcccgatgtga

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